Cucsat.G8047 (gene) Cucumber (B10) v3

Overview
NameCucsat.G8047
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionRING-type domain-containing protein
Locationctg1556: 3376865 .. 3385079 (-)
RNA-Seq ExpressionCucsat.G8047
SyntenyCucsat.G8047
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTTGGGTACGGAGGAAAGTTAGAGAAGCGGTATGGATGAGAAATAGAAGGACCAAGCTTCAAAAGATGATGAGATTGATAAGCAAAGTAGATTAAATTGGACCAACCTATGATGTATCGATCATATGGACCGAACCAAGTGAGTTCTTCCAATTTCAACAGAGGAAAATTTGCATTCTTTTGATTTTTCTGGCTTGTATTCCACGTATGATTGGCAGCAACAAATAGATTGTAATAGTAATAAAGGTATCAAATTTCAAGCCTGTTTGAAATTGCGATCGGATTTTGATAATGGAGAGCTGACCTTCTTTCTTCCTTTACCCCTTGATTTTTTCCCCTTTTTCTCTTGTTCGCTCTCTTGCCCTTCTTCCCTCAAGCTTTATAGGGCTCAAATTTCTGCCATTTCTGTTCATCATCACCATCGAAACCCCATCAAGGCTTTCTTTTTTTTTTTTTTTCCTTATTCTTTCATCTTCTTTCCCATCACCCTTCTTTTACTGCCACCATTTTCATCCATTTATCCAATCAAACCCCTCCCTCTTTCACCCCTTTTCATGATTCGCCGGTTTCTTTGACCTTTTTTAATCCGATGATCGTGCCCCACTTGCTTGATTTCTGATTCAGTATTGTTATTGTGTTCTTGTTGTTGCTAGAAGTACTTTTGATTTGATATTGTTATCTGGGTTGTTGCCATGTGATGATTTTCTTTTTCTTTATCTGAGGTTCTCCACGGAGTCTCGTTTGCGGAGAAGGTAATTTCAAGTTCTGTTTCTTTTACTGGTTCTTGATAGTTTTTGTTGCCCATTTCTTGTAGCTTTCAACTTCATTATCTTTAGATTGCTTCTTTTACAAGGAAATTTGTCTTCCCTCTTCATGTTAGGGTCAAATTTTTCGTATGTTGTTGAATTGATTGTCAAGAATGTTATGATGATTAGGGTTAGGCCATTCACCCGAATGGAAGGGTCTGGTAGCGACCCCGACTCTCATAGAGCTGCTTCCACCAGTGGTAGTTCAAGAAGGTTTGGAATGTTAGCTGCCTCAAATATTATTCAGGCTCCGCTTTCTGCACTATTAGAGTATTCGGGTCTTCTTCGTGGCCGTCAAAGTCATCAAGAATCAGAGGCATTGATAAGTGCTCGACTGCCTTCGGGGTTTCGAGACCATCTTCGCAGCCATATTGAAGAATCTTCGGGTGCCACCAATGATGGAGAGGTTTCGATTAGGATAATTGGGGCAGGGGAACCAGAACATGGTAGGGATGGTGCTGGACTAGTAGTTGGGCAAGCGAGGGATGTTAGTGGTCAGAATGCGGTGTCTTTGCAATCTGTTTCAGGGTTGGCTTCTGTGACCTTGGGGTCGGAGCTTAGCCAGGGTGAGTCTGCCAATGAACGCGGTGCAAGAGAGGGTATTCCTGAATCGATAAATGCAGGTGCTGATGGAGATGCCTCGGAGGCAGCTGGAGGAAATAGCAGGGATTCTTCTTATCAGAGATATGACATTCAACAGGCTGCTCGGGGGATTGAGCAGATACTCCCATTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGTACCTGCCTTGACTTTATTCATGATCTTAAATTACTATGGGTTACCAAACATTTATTTACTTCCAATTTTAAGTTGTCATTAATGTGGCTGGATTATGGGCAATCATGAACTACTGCATTGTCTTTATGGAGCAAGCATATGTGCTCTTTAGCTTTATTGTCTTTGATCGTTTTCTATGAGAAAAAAAGCTGAATAAAGTTGAATGAAATTCTTGAAATATCACGGAAATTTTGAAAATCAATGGAATTTAACTTTTATGATCACTTGGTGACTTTCCTATTACCAAATGCAATTGAAAATAGAAAAGCGAACAAACGAACGAGCAGAATTTACAAACTGTCAACTTGGGAAAAAATAATCTTCCAATGTACAATCAATGTTGTATTAACAGTAGTGAAAACTCAACCTATCAAAGTAAACCAAGAATTATACCTCATTTAAATTTCTATAAACTCTAAAATTTTGAAGTATAGTGCATGAAGATAGGAATAGACAAACTGACAAATTACTTAATAATTAAGATCAAACTTTTTTATCCATAAAGATTAATGTGAAGCTCATATCATCTACTTCATCATGTTTTCAAGGGTTAAAATAAAATTTAACTGATGAATTGAGATGTAAACTTCCCTTGTACAAAAATCCATGAACAAGGATATTAGTTCTTTTTTTGTTAGATTCTCAAATTTAGATATAAACTTGTGCATTGTTAGTCATTTTGTTATATTCTTGTATTAGTTTACTTATTTACTTTTAATAATTATATTGTCTTTTTAACTAATTTAATATCAATTTATCAAATCATGATCTTGATGCTAATTATTGGTCATTTTTTGGGGGGTTTAATCCTTTGTGGTTTTGATGCTAACTATTAATGTTTAAGCTTTTTCTGGCTTATATGCAAAATTTACATGTGTTTCCTTGAGAGATATTTAGTTGTATTTATGTGTTTATTATATTGTAGCTCAGATGAACTTAACATCATCTGTATCAAACTAATCCAATTCTCAGAAATTGAAGCATGTAAATATCTTTCCCTTTGATAAGATACCTCAGAGTTTTTTTTTCTTCTCTCTTGAAGAGTTAATTGTGTCAAGGTGATTTAGATGTTGAACAACAAGAACGTAAAAGCCAATAAATTTTTAGTTAAAATTAAAATTTAGAATGAAAGAAAGGAAAAGAAGTAGAATCAAAAGTCTATCACCTTTAATCAATATTTGATTTGACACAGAACTGATTATAACGTAAAGTCAGATATAGAAATATTTAAGAATGCTTTCGTTATTTTGTTTTTACATTTATAAAAGATTAAATTGTTTTAATATTACATGTCTCCACATATATTTCTCTATGATTTCTTCTTCTGGTGTTGATACTTGTGCCCTAAACGTGCAGGCTTCTTTGTGACAATATGGATCGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGTGTGTTAAAGCATATTTTAATGTTTGGGTTCCTTGCAGGCTTTTTTTTGTGTGTGTGTGTCTGTATGTTGGAGTATGAAACAGAAGGAAAGTAGGACGTAAAAATATCCTACGCTGGCATTGGTTAATAGGTTCCTATGTGAACCATAAATGGCTTGATGAGAATGCGTTCAAGCAATGATGACCACCTACTTAGAATTTATTACTCAGTATCCTACAAGTTACTTATTACACGAACACATGTATTATTTTAATGAATAACCAATGTTTCATTGATGGAAATAAATATATTGTAGAGTTAAAAATGGGTTGGTCTAGAGGTAAAAATGGAAATATAGTCTCAATAACTAATTAAAAATATCCTACGCTACCTACCTACGAGTTTCCTTAACACCCAAATGTTGTAGGGTCAGACGGTTGTCTCGTGAGATTAGTTAAGGTGCACAAATGTTGAACTCATGATCGACACCACACCCAAAGGAAATTTCCCAAATGTTGTACCTACGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAGACAGTTGTCTCGTGAGATTAGTCGAGCTGCACATAAGCTGACCAAATTTCTACAAATTACTTGACAATCAAACTTGATAGACTTAGGCAGTTTTCCCATGAGAATAGTCAAGGTGCAAGCTGGCGTTGGGGCACTTGAAAATATAAACAAAACTTTCATTTAATATATGTATAGATTTTATATTTTTATATAAAAACTATTATTATTATTATTTGTTTAAAGAAGTGAAGAAGGTAAGTGCCATTAGGAGACTACAAGAAGGTCTATGTGGATAAGTTAACATCGATGATAAGTCACACTTTATTATTTGGTATCTTGAAGAGTCATGAAAGTTAAAGCCCAAGACATCCTCAAATTTCACCCTTTCCAGCTTAAGCTACCTTAAACAGGAAAACTTTGATGAGCCTAAGCTTCCTTTTATATCAGAGGTTTGGACATGTGTCTGGGGCTACTTTATATTAGAGAAATGTGGGCATCTAGAGCTACAAAACTATTTTTCTTTTGATGCGATAGAGCTACAAAACTATAATATCTACGTCCATGTTTTAGCATCAGCTGCCTCGTCAATTGAAATGGTGTGATCCCCCTTTCCTTAACTCTTTCATGGTGGTTGGATTTTATTTTCCTCTATCTGAAGTTATTCAGCCCATTTCTTAATAGTTTTGCTCCCCGAAATCCCCAGTCAACCCTTATTCCATCACTATAGCTATTTCAATCTCCTTTCAATTTGTAAGGTCTTTTGTAATCTCTCTATTGGGCTCCCCTTTTGTAATTTCATACCATCAACAGAATCATTTGCCTTCTTAAGATTGAGTATAGACCAGGCCATTCACAGGGTAGACTTTCTTATACTTACTCGTTCTGCCCTCCCAGTTAGGGATGGGTTTAAAACTTTTGTCCTGAAACAAATTCGTTTTGATTATCAGAAATAGTATCCTGAATCACTCTACTTGTTAGTTTGGCTAATACCTGATCACTTTATATATGGCAATGACCAATCTTGCTGTACTGTTCCTGTTGTTTTTTCTTTATTCCATTTTTCTAAACATGGGCTTTATTGGTGTTCCTGCAGGGAGAGAGAAAAATTTCTGTTTTGGTTTGCATTTCTCTTGCGTTCACTATTCATGTTATTGGTGTGTACTGGTGGTATCAGAATGATGACCTTTTATATCCGTTGATCATGTGTCCTCCCAGAGCGATTCCTCCTTTCTGGCATGCTATTTTCATCATTATGGTGAATGGTAACCTTCTGTTAAAGTTTTTACTGATTATTAGTGTATGTTCACCGATCATAATCTATACATGTTATATTGACAAAGAAGTGCTTTTACTAACTATGCTAGACTGCCTAGTCACATAATTTTCTTCAAATTATTTATTTTCTCAAATTTTCTCTGACTGATAGTTATTTATTTATTTTAATTGGAGACTTAAAACACTTCATTCAATAAACAAAAAACAAAAGAGGATAACCTAACTGGCAAAGGCCAAGGGTTAAAGAAACACTTTCCTATCAAATTAAAGTGTAACAATTATAAAAAGACTTCTGTTGACTACACTACACCAGTTGAAAGCCTTAAACTTTACAAGATCAGAAAAGTATAAAAAGAATTGACTTAGTATTTTTTTTTAATTTTCTAGATCTACTTGCTTAAAAATGAATACTGCATTTATGTCAGTATCTTACTAGTTACTACTGATTAAATTGTTTTTAGTTATGCCTTTTAGTTTTGCTTTCTAATTTATGAAAGTAAATCACAAACGATTTTTTTGGTAACTAATTAGGTTAAATATATGATTTTGTGTTGGTTTCTCAGACACTTTGGTCCGTCAGGCAGTGATGGTGGTCAAGTGTGTTCTATTGATGTATTACAAGAACAGTAGAGGTCGCAATTATCGTAAACAGGTGGGATAACATAGAAGTTGGCTCTTTTGTATACTTCATGAAAGACTTCTTTTGGATTCAGTAACAAATATCCTTTTATTGAGCTCATTGTTTATTTCTCTTTAAAAAAAGTGGCAAATTTAGAATTTGCAAATGTTTTGTCAGTCTGTGAGTATGCACCTAAAATCCACAGTTTCTCCAGGGTCAAATGCTAACTTTGGTCGAATATTTGCTACTACTGTACCGTGCCTTATTGCCTACTCCTGTTTGGTATCGTTTCTTCTTGAACAAAGAGTATGGGAGTCTATTTTCGTCACTATTGACGGGACTATACTTAACTTTCAAACTCACATCTGTTGTTGAAAAGGTAAGTTTTCTATTACTTTTTGAACTCATTTTTACTATTATATTCTGTCACCAGATGGTCTCTCTGTTATCTCCCTTCCCTGTCTCACTTTTCTTTTTGATGTGGAATTCAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCACTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACATCAGAGCAGGTAAATTGAATCTCATTTATGCCTTTCTCCAGTCGACTAAACTTTTTTACTGCAGGATGCCATTTATATTTTCCTTTTAATGCATTTTATTTTACTTTTCTGGGAATCCTTGAGTGTCTTTGCTGCATCTTAACTCATCTCAGGACGTTTGCATTTAACGAAATATTGCAAGCATCTTAAATTTGTAGGTTTATTTTCATGAAAAAAAAAAAAAAAAATCAATTGAGTTTCGATAACGCAACCATGGATTCAGTTTTAAGCCATAAAAGCTGTTTTGTGGGATATTTGTTTGGAAGGAAAGCAAAAAACTTTTTAGGAAAGACCCTTGGGGGTGGAATGAAAAGTCTTGCAGGTTTGTGGACTGCAATCCTAGGTTCTCTTTGTATTTAGTCTTATAATGTATTCTCTTCTAGACTTTGTTGGTTTGTTTATTTGTTTTTCTTTGTGTGTTCTCTTTGGATGAGGGATTGAACCATCAATTTTTGAATGGTAATATGTTCTTTGACCACTTGAGTTCTATGCTCATGTTGGTGTCATCCCTTCTAGTTGGGGGCGACTTTCATCATAATTTTGGTCGTTTTCTCTCCTTCAGTAGTCTGTACTCTGTAGTGGTTCCTTCAAACTTTTCCTATAGGCAGATTGGTTGCTGGCGAATTTGTAATTTTTTTAAAAATGATAATAACAACAACAATAATAACAATAATAGAATAATAATATCAATAATAAAAATAACAACAAGAATAACAACAACAAGAATAATAATAAGAATAAGAATAACAACAACAACAACAACAACAAAAAGGAACAGAACAAAATATCCTTGACATCTAACTTGTTATTTGCCTAATTCAGGTCAGCGCAGCAGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTTCTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAATGGTATGTTTATTGCATGAAATTCTCCCATGCTTCATACTCTCACAATCTATATGTTGTACTGATCATTTGCTAAGAGGTTGATTTCAATTTCAGTAATCCAGCACTAAAGGTTTCCTCATCTTATGGTGTGGAGCCTTAAAGTTCGACCATTTGTGATTTCCAATGGTTAAACTATCGCATTTCTGGTTTTTTCAATGTGTGAAACACAACTTACTTACTAATAGTGTTCAATTGTCGAATGTTATAGACATAGCTTAGTGGATGAGAAATTCTGCGGAGTTGGGACTTGATAACAAGGGTAATATGGTAATTAGTGGGGGTAGTTTTTGTAAGGGAATAATTGTTGTAAGTAGATGGATAGAGATGGGAGAAGGCAATCCATCATCGGGGTGGTTTAATCTTGAGCAAACTTAGATGATGTACTTCGAATTACTTGGTATTTTGATTTTCGAGTCTTGTTATCTTGTTCCAAACTAGATTTCAAACAAAACTAGCATTTTTTGTCCTACTTCTATTAACCAGGACTTCGGAACTAAAACGTCCAAAGGAAGGAGAATGGGGGCAAATAAATGCCAACTTACCTACCTTTAGTGTTCTTAATATATTGTTCACTTTGATACCAATTTTGGACTGGTTGGTGCTATGTGCAGGTTTGAGCGGGAACGGACATGTCCATTGTGTAGGGCGTTGGTTAAACCCGCAGATCTGAGGTCATTTGGTGATGGATCAACAAGTTTGTTTTTCCAGGTTTTCTAAGCCATTTACTTCAAAGCCCCTCAGAAGGCTTTGTAGTTTGAAGAGGTGAAGGGAAGCCAGCCAATTGCATTTGTTTACCCCTACACAAAATTGTACATCTAACTAAATACTGTGTAGCTGCTGCCAATTGAGGAAGCAAAAGACTGGGGCTTGTGAAGTTGGAAAGGCAAATTCAAAATCGACATTTATACATATTATAGTCCTTTTTGTGCTACAGCAAAGAACGGTGGATGTTCGAGAGGAGTTTAACCCTTCTATGAAAATTTTATGAATTGTGATTCTGGGGTGTAAATTTATTAGCAAAGCCAGTTTGCTGTGTTGTCGATTTTATAATTTAGTCCAAATGCATATAATGAGAATGTTTTGGACTCTAGTAATTGTTATATACACATACACAGTGTCAGACATGTCTTTTGGCTCTTCAGTCTGTGCTTTTGTTTGATTTGAAAATTAAGAAAGGAAGTGAATATGATGAATTTTTAGAATTGGATATCTTTTTAA

Coding sequence (CDS)

ATGGAAGGGTCTGGTAGCGACCCCGACTCTCATAGAGCTGCTTCCACCAGTGGTAGTTCAAGAAGGTTTGGAATGTTAGCTGCCTCAAATATTATTCAGGCTCCGCTTTCTGCACTATTAGAGTATTCGGGTCTTCTTCGTGGCCGTCAAAGTCATCAAGAATCAGAGGCATTGATAAGTGCTCGACTGCCTTCGGGGTTTCGAGACCATCTTCGCAGCCATATTGAAGAATCTTCGGGTGCCACCAATGATGGAGAGGTTTCGATTAGGATAATTGGGGCAGGGGAACCAGAACATGGTAGGGATGGTGCTGGACTAGTAGTTGGGCAAGCGAGGGATGTTAGTGGTCAGAATGCGGTGTCTTTGCAATCTGTTTCAGGGTTGGCTTCTGTGACCTTGGGGTCGGAGCTTAGCCAGGGTGAGTCTGCCAATGAACGCGGTGCAAGAGAGGGTATTCCTGAATCGATAAATGCAGGTGCTGATGGAGATGCCTCGGAGGCAGCTGGAGGAAATAGCAGGGATTCTTCTTATCAGAGATATGACATTCAACAGGCTGCTCGGGGGATTGAGCAGATACTCCCATTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATATGGATCGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGGAGAGAGAAAAATTTCTGTTTTGGTTTGCATTTCTCTTGCGTTCACTATTCATGTTATTGGTGTGTACTGGTGGTATCAGAATGATGACCTTTTATATCCGTTGATCATGTGTCCTCCCAGAGCGATTCCTCCTTTCTGGCATGCTATTTTCATCATTATGGTGAATGACACTTTGGTCCGTCAGGCAGTGATGGTGGTCAAGTGTGTTCTATTGATGTATTACAAGAACAGTAGAGGTCGCAATTATCGTAAACAGGGTCAAATGCTAACTTTGGTCGAATATTTGCTACTACTGTACCGTGCCTTATTGCCTACTCCTGTTTGGTATCGTTTCTTCTTGAACAAAGAGTATGGGAGTCTATTTTCGTCACTATTGACGGGACTATACTTAACTTTCAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAAAGCACTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACATCAGAGCAGGTCAGCGCAGCAGGTGATTTGTGTGCTATTTGCCAAGAGAAGATGCATGCTCCTATCCTTCTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAATGGTTTGAGCGGGAACGGACATGTCCATTGTGTAGGGCGTTGGTTAAACCCGCAGATCTGAGGTCATTTGGTGATGGATCAACAAGTTTGTTTTTCCAGGTTTTCTAA

Protein sequence

MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALISARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAVSLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Homology
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BLAST of Cucsat.G8047 vs. ExPASy Swiss-Prot
Match: Q96EX2 (RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RNFT2 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 59/155 (38.06%), Postives = 94/155 (60.65%), Query Frame = 0 

Query: 20  RKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF--SSLLTGLYLTFKLTSVVEK 79
           + +G+   ++E L  L+R+L+P  +WY++ +  +  + +    +L  LY   K   +  +
Sbjct: 292 KSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGR 351

Query: 80  VQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSE 139
           V     ALK L   + +YG  AT +Q + AGD+CAICQ +   P++L C+H+FCE+C+  
Sbjct: 352 VGGVRKALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAEFREPLILLCQHVFCEECLCL 411

Query: 140 WFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 173
           W +RERTCPLCR+ V    LR + DG+TS  FQV+
Sbjct: 412 WLDRERTCPLCRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]
BLAST of Cucsat.G8047 vs. ExPASy Swiss-Prot
Match: Q5RAG4 (RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=9601 GN=RNFT2 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.7e-24
Identity = 58/155 (37.42%), Postives = 93/155 (60.00%), Query Frame = 0 

Query: 20  RKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF--SSLLTGLYLTFKLTSVVEK 79
           + +G+   ++E L  L+R+L+P  +WY++ +  +  + +    +L  LY   K   +  +
Sbjct: 292 KSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGR 351

Query: 80  VQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSE 139
           V     ALK L   + +YG  AT +Q + AGD+CAICQ +   P++L C+H+FCE+C+  
Sbjct: 352 VGGVRKALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAEFREPLILLCQHVFCEECLCL 411

Query: 140 WFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 173
           W +RERTCPL R+ V    LR + DG+TS  FQV+
Sbjct: 412 WLDRERTCPLSRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]
BLAST of Cucsat.G8047 vs. ExPASy Swiss-Prot
Match: Q5M7Z0 (E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-24
Identity = 63/177 (35.59%), Postives = 101/177 (57.06%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLN-KEYGSL-- 60
           M +KC++L+    S    ++ +G    L+E L   YR  +P PVW+R+ ++  E+G++  
Sbjct: 263 MGLKCLILLV--PSFIMPFKSKGYWYMLLEELCQYYRTFVPIPVWFRYLISYGEFGNVTR 322

Query: 61  --FSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQ 120
                LL  LYL  KL      +++F   L+ +   +  YG  A+  Q S   D+C+ICQ
Sbjct: 323 WSLGILLALLYLILKLLEFFGHLRTFRQVLR-IFFTQPSYGVAASKRQCSDVDDICSICQ 382

Query: 121 EKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 173
            +   PILL C+HIFCE+C++ WF RE+TCPLCR ++    +  + DG+TS   Q++
Sbjct: 383 AEFQKPILLICQHIFCEECMTLWFNREKTCPLCRTVISD-HINKWKDGATSSHLQIY 435

[Close]
BLAST of Cucsat.G8047 vs. ExPASy Swiss-Prot
Match: Q6NTV1 (E3 ubiquitin-protein ligase RNFT1 OS=Xenopus laevis OX=8355 GN=rnft1 PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.9e-24
Identity = 65/179 (36.31%), Postives = 101/179 (56.42%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSL--- 60
           M +KC++L+    S   +++ +G     +E L   Y  L+ TPVW+R+ +  +YG+L   
Sbjct: 244 MGLKCIILLV--PSFVMSHKSKGYWYMALEELAQCYCTLVSTPVWFRYLI--DYGNLDSG 303

Query: 61  ----FSSLLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAI 120
               F  LL  LYL  K+  +  + ++    L+ L   + +YG  AT  Q S A  +CAI
Sbjct: 304 AEWHFGILLALLYLILKILIIFGQRKTSSDCLR-LFLSQPNYGTTATKRQCSEADGMCAI 363

Query: 121 CQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 173
           CQ +   PI L C+H+FCE+C+S WF +E+TCPLCR L+       + DG+TSL  ++F
Sbjct: 364 CQAEFTKPIALICQHVFCEECISSWFNKEKTCPLCRTLISNHS-HKWKDGATSLQLRIF 416

[Close]
BLAST of Cucsat.G8047 vs. ExPASy Swiss-Prot
Match: Q6NZ21 (E3 ubiquitin-protein ligase RNFT1 OS=Danio rerio OX=7955 GN=rnft1 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 6.4e-24
Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = 0 

Query: 19  YRKQGQMLTLVEYLLLLYRALLPTPVWYRFF-----LNKEYGSLFSSLLTGLYLTFKLTS 78
           YR++GQ   L+E +  LY+ + P P+W+R+      ++   G     LL  LYL  KL +
Sbjct: 263 YRRRGQWYMLIEEVGQLYQVIAPVPLWFRYLVSYDEMDTSVGLTLGILLALLYLIMKLLA 322

Query: 79  VVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCED 138
           +     S    L+     EV+ GA A+  Q+  AGD+C ICQ     P +L C+HIFCE+
Sbjct: 323 LYGLSGSLQKTLRTFFSPEVN-GAPASPAQIREAGDICPICQADFKQPRVLVCQHIFCEE 382

Query: 139 CVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 173
           C+++W  +ERTCPLCR ++    +  + DG+TS   Q++
Sbjct: 383 CIAQWLNQERTCPLCRTVITD-KVHKWKDGATSAHLQIY 419

[Close]
BLAST of Cucsat.G8047 vs. NCBI nr
Match: KAG6595535.1 (RING finger and transmembrane domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 340 bits (873), Expect = 1.25e-115
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 60
           MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
Sbjct: 130 MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 189

Query: 61  LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 120
           LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA
Sbjct: 190 LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 249

Query: 121 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQV 171
           PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQ+
Sbjct: 250 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQL 300

[Close]
BLAST of Cucsat.G8047 vs. NCBI nr
Match: KHN40596.1 (RING finger and transmembrane domain-containing protein 2 [Glycine soja])

HSP 1 Score: 336 bits (861), Expect = 3.66e-115
Identity = 165/172 (95.93%), Postives = 171/172 (99.42%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 60
           MV KC+LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
Sbjct: 61  MVFKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 120

Query: 61  LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 120
           L+TGLYLTFKLTSVVEKVQSFFAA+KALSRKE+HYGAYATSEQV+AAGDLCAICQEKMHA
Sbjct: 121 LMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEMHYGAYATSEQVNAAGDLCAICQEKMHA 180

Query: 121 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 172
           PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQ+F
Sbjct: 181 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 232

[Close]
BLAST of Cucsat.G8047 vs. NCBI nr
Match: XP_022924893.1 (E3 ubiquitin-protein ligase RNFT1-like [Cucurbita moschata])

HSP 1 Score: 343 bits (881), Expect = 8.04e-115
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 60
           MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
Sbjct: 296 MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 355

Query: 61  LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 120
           LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA
Sbjct: 356 LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 415

Query: 121 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 172
           PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 416 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467

[Close]
BLAST of Cucsat.G8047 vs. NCBI nr
Match: XP_023518225.1 (E3 ubiquitin-protein ligase RNFT1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343 bits (881), Expect = 8.04e-115
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 60
           MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
Sbjct: 296 MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 355

Query: 61  LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 120
           LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA
Sbjct: 356 LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 415

Query: 121 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 172
           PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 416 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467

[Close]
BLAST of Cucsat.G8047 vs. NCBI nr
Match: XP_038881776.1 (RING finger and transmembrane domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 343 bits (881), Expect = 8.82e-115
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 60
           MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
Sbjct: 299 MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 358

Query: 61  LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 120
           LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA
Sbjct: 359 LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 418

Query: 121 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 172
           PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 419 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 470

[Close]
BLAST of Cucsat.G8047 vs. ExPASy TrEMBL
Match: A0A6J1EDR3 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita moschata OX=3662 GN=LOC111432304 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 3.89e-115
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 60
           MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
Sbjct: 296 MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 355

Query: 61  LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 120
           LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA
Sbjct: 356 LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 415

Query: 121 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 172
           PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 416 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467

[Close]
BLAST of Cucsat.G8047 vs. ExPASy TrEMBL
Match: A0A0A0L088 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337310 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 4.41e-115
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 60
           MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
Sbjct: 300 MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 359

Query: 61  LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 120
           LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA
Sbjct: 360 LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 419

Query: 121 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 172
           PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 420 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]
BLAST of Cucsat.G8047 vs. ExPASy TrEMBL
Match: A0A1S3CIV8 (RING finger and transmembrane domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103501489 PE=4 SV=1)

HSP 1 Score: 343 bits (881), Expect = 4.41e-115
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 60
           MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
Sbjct: 300 MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 359

Query: 61  LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 120
           LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA
Sbjct: 360 LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 419

Query: 121 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 172
           PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 420 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]
BLAST of Cucsat.G8047 vs. ExPASy TrEMBL
Match: A0A6J1DPQ0 (RING finger and transmembrane domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111023167 PE=4 SV=1)

HSP 1 Score: 342 bits (878), Expect = 1.07e-114
Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 60
           MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
Sbjct: 295 MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 354

Query: 61  LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 120
           LLTGLYLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA
Sbjct: 355 LLTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 414

Query: 121 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 172
           PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 415 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 466

[Close]
BLAST of Cucsat.G8047 vs. ExPASy TrEMBL
Match: A0A6J1IS82 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC111478227 PE=4 SV=1)

HSP 1 Score: 342 bits (877), Expect = 1.48e-114
Identity = 170/172 (98.84%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 60
           MVVKC+LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS
Sbjct: 294 MVVKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSS 353

Query: 61  LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHA 120
           LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQV+AAGDLCAICQEKMHA
Sbjct: 354 LLTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHA 413

Query: 121 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 172
           PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 414 PILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 465

The following BLAST results are available for this feature:
BLAST of Cucsat.G8047 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q96EX21.2e-2538.06RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=960... [more]
Q5RAG41.7e-2437.42RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=960... [more]
Q5M7Z02.2e-2435.59E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2[more]
Q6NTV12.9e-2436.31E3 ubiquitin-protein ligase RNFT1 OS=Xenopus laevis OX=8355 GN=rnft1 PE=2 SV=2[more]
Q6NZ216.4e-2436.48E3 ubiquitin-protein ligase RNFT1 OS=Danio rerio OX=7955 GN=rnft1 PE=2 SV=2[more]
BLAST of Cucsat.G8047 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6595535.11.25e-11599.42RING finger and transmembrane domain-containing protein 2, partial [Cucurbita ar... [more]
KHN40596.13.66e-11595.93RING finger and transmembrane domain-containing protein 2 [Glycine soja][more]
XP_022924893.18.04e-115100.00E3 ubiquitin-protein ligase RNFT1-like [Cucurbita moschata][more]
XP_023518225.18.04e-115100.00E3 ubiquitin-protein ligase RNFT1-like [Cucurbita pepo subsp. pepo][more]
XP_038881776.18.82e-115100.00RING finger and transmembrane domain-containing protein 2 [Benincasa hispida][more]
BLAST of Cucsat.G8047 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EDR33.89e-115100.00E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A0A0L0884.41e-115100.00RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337310 P... [more]
A0A1S3CIV84.41e-115100.00RING finger and transmembrane domain-containing protein 2 OS=Cucumis melo OX=365... [more]
A0A6J1DPQ01.07e-11499.42RING finger and transmembrane domain-containing protein 2 OS=Momordica charantia... [more]
A0A6J1IS821.48e-11498.84E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC1114782... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 61..125
e-value: 5.7E-11
score: 43.7
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 87..114
e-value: 3.1E-7
score: 30.3
NoneNo IPR availablePANTHERPTHR15860:SF19RING/U-BOX SUPERFAMILY PROTEINcoord: 1..115
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 86..120
IPR044235RING finger and transmembrane domain-containing protein 1/2PANTHERPTHR15860UNCHARACTERIZED RING FINGER-CONTAINING PROTEINcoord: 1..115
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 102..111
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 87..118
score: 10.305834

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G8047.T1Cucsat.G8047.T1mRNA
Cucsat.G8047.T4Cucsat.G8047.T4mRNA
Cucsat.G8047.T5Cucsat.G8047.T5mRNA
Cucsat.G8047.T3Cucsat.G8047.T3mRNA
Cucsat.G8047.T14Cucsat.G8047.T14mRNA
Cucsat.G8047.T10Cucsat.G8047.T10mRNA
Cucsat.G8047.T11Cucsat.G8047.T11mRNA
Cucsat.G8047.T6Cucsat.G8047.T6mRNA
Cucsat.G8047.T7Cucsat.G8047.T7mRNA
Cucsat.G8047.T8Cucsat.G8047.T8mRNA
Cucsat.G8047.T13Cucsat.G8047.T13mRNA
Cucsat.G8047.T2Cucsat.G8047.T2mRNA
Cucsat.G8047.T12Cucsat.G8047.T12mRNA
Cucsat.G8047.T9Cucsat.G8047.T9mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:1904294 positive regulation of ERAD pathway
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016301 kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity