Cucsat.G6453 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G6453
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	gibberellin 20 oxidase 3
Location	ctg1449: 621525 .. 622449 (-)
RNA-Seq Expression	Cucsat.G6453
Synteny	Cucsat.G6453

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCAAAGCTGCCATGGAAGGAAACTTTCTCTTTTGGGTTTGACCATTGCAATAGCTTCAATAATGAACCATCTGTTGTTGATTTCTTCTCTTCCACTCTGGGCAAGGAATTTAAAGAAATTGGGTATGGTATTCAAACCCCTATATCTCAAATTAAATACTAATAAATTTTGGAAAAAAACATGTATCTGTTCGTTGCATGATACATTTTTCTTTTTCTTTTTTTCTTTAGAAGTTATTTTTATTTTTTATTATATATTTTCAGTGTGATGCAGAAAGATTATACACAATATTGATAAAAGACTTTAGGAAAAAAAATACGAATTTTAAGAAAATTTACATTTTTATCCTAAGATATCTTAGTTTTATTCGATCTCTATATTTCAAAAAGTTAAACTTTTAATTAACTAAAATTTGATGATATTTTAGTTTTTAGATTTTCAAATGTTACAAATTTATTCTGCAGATTTGATTTTCTCTCCAACTTTATCCATTTAACTTCAAATTTAATTCGAAATAATTATGGGTGAAGTTTTAAAATTAATTTTAATAGTGATAAAAATTTGTGAACTTAATTAATTATAATTTTCTCAAATTAATAAATATAGCTGATTAATACTAAAGATTGAGAGGAAGTAATTGGTGAAAAGTTTAGGTGTATGGAAAATGTAAAGCTTGAAATTTATGGTTTAAATTGAAATAAAACTAGAGAATGATTTGGAGAAACTTGAACAATGAACAGGGTTATATATGAAAAGTACTGCGAAGCAATGAGGGACCTTTCACTAGCATTAACCGAGCTCTTGGGAATAAGCTTGGGACTGGAGAGATCTCATTTTCGCAAGTTTTTCGAAGATGGAAGCTCCATAATGCGATTGAACAGCTACCCAATTTGCGAACAAGGCGGCGTGGCCCTCGGTACTG

Coding sequence (CDS)

TCTTCAAAGCTGCCATGGAAGGAAACTTTCTCTTTTGGGTTTGACCATTGCAATAGCTTCAATAATGAACCATCTGTTGTTGATTTCTTCTCTTCCACTCTGGGCAAGGAATTTAAAGAAATTGGGGTTATATATGAAAAGTACTGCGAAGCAATGAGGGACCTTTCACTAGCATTAACCGAGCTCTTGGGAATAAGCTTGGGACTGGAGAGATCTCATTTTCGCAAGTTTTTCGAAGATGGAAGCTCCATAATGCGATTGAACAGCTACCCAATTTGCGAACAAGGCGGCGTGGCCCTCGGTACT

Protein sequence

SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALTELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT

Homology

[Close]

BLAST of Cucsat.G6453 vs. ExPASy Swiss-Prot
Match: Q39111 (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=GA20OX2 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-26
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           S+KLPWKET SF F + NS     +V D+FS TLG+EF++ G +Y+ YCEAM  LSL + 
Sbjct: 143 STKLPWKETLSFQFSNDNS--GSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIM 202

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 103
           ELLG+SLG+ R +FR FFE+  SIMRLN YP C+   + LGT
Sbjct: 203 ELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGT 242

[Close]

BLAST of Cucsat.G6453 vs. ExPASy Swiss-Prot
Match: P0C5H5 (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica OX=39946 GN=20ox2 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.5e-25
Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           +SKLPWKET SFGF   +     P V D+FSSTLG +F  +G +Y+KYCE M++LSL + 
Sbjct: 148 ASKLPWKETLSFGF---HDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIM 207

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 103
           ELL +SLG+ER ++R+FF D SSIMR N YP C +    LGT
Sbjct: 208 ELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGT 246

[Close]

BLAST of Cucsat.G6453 vs. ExPASy Swiss-Prot
Match: Q0JH50 (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GA20OX2 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.5e-25
Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           +SKLPWKET SFGF   +     P V D+FSSTLG +F  +G +Y+KYCE M++LSL + 
Sbjct: 148 ASKLPWKETLSFGF---HDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIM 207

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 103
           ELL +SLG+ER ++R+FF D SSIMR N YP C +    LGT
Sbjct: 208 ELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGT 246

[Close]

BLAST of Cucsat.G6453 vs. ExPASy Swiss-Prot
Match: Q39110 (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=GA20OX1 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 7.6e-25
Identity = 54/102 (52.94%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           S+KLPWKET SF F  C+  +   SV D+F   LG  F+  G +Y++YCEAM  LSL + 
Sbjct: 145 STKLPWKETLSFRF--CDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIM 204

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 103
           ELLG+SLG++R +FR+FFE+  SIMRLN YP C +  + LGT
Sbjct: 205 ELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGT 244

[Close]

BLAST of Cucsat.G6453 vs. ExPASy Swiss-Prot
Match: Q39112 (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana OX=3702 GN=GA20OX3 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.5e-23
Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKET SF F      +++ +V DF S  +G  +++ G +Y++Y EAM  LSL + 
Sbjct: 143 SSKLPWKETLSFKFSPEEKIHSQ-TVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIM 202

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 103
           ELLG+SLG+ER +F++FFED  SI RLN YP C+Q  +ALGT
Sbjct: 203 ELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGT 243

[Close]

BLAST of Cucsat.G6453 vs. NCBI nr
Match: XP_004144295.2 (gibberellin 20 oxidase 1-D [Cucumis sativus] >KGN47512.1 hypothetical protein Csa_018977 [Cucumis sativus] >CCG14216.1 GA 20-oxidase [Cucumis sativus])

HSP 1 Score: 210 bits (535), Expect = 6.21e-65
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT
Sbjct: 140 SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 199

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 102
           ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT
Sbjct: 200 ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 241

[Close]

BLAST of Cucsat.G6453 vs. NCBI nr
Match: XP_008441598.1 (PREDICTED: gibberellin 20 oxidase 3 [Cucumis melo] >TYK18655.1 gibberellin 20 oxidase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 206 bits (524), Expect = 2.81e-63
Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSS LGKEFKEIGVIYEKYCEAMRDLSLALT
Sbjct: 140 SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSALGKEFKEIGVIYEKYCEAMRDLSLALT 199

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 102
           ELLGISLGLERSHFR FFEDGSSIMRLNSYPICEQGGVALGT
Sbjct: 200 ELLGISLGLERSHFRMFFEDGSSIMRLNSYPICEQGGVALGT 241

[Close]

BLAST of Cucsat.G6453 vs. NCBI nr
Match: XP_038885915.1 (gibberellin 20 oxidase 3-like [Benincasa hispida])

HSP 1 Score: 194 bits (494), Expect = 9.33e-59
Identity = 95/103 (92.23%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDH-CNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLAL 60
           SSKLPWKETFSFGFDH CNS NNEP VVDFFSSTLGKEF+EIGVIYEKYCEAM++LSLAL
Sbjct: 140 SSKLPWKETFSFGFDHSCNSSNNEPPVVDFFSSTLGKEFEEIGVIYEKYCEAMKELSLAL 199

Query: 61  TELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 102
           TELLG+SLGLERSHFRKFFEDGS+IMRLNSYPICEQGGVALGT
Sbjct: 200 TELLGLSLGLERSHFRKFFEDGSAIMRLNSYPICEQGGVALGT 242

[Close]

BLAST of Cucsat.G6453 vs. NCBI nr
Match: XP_023550661.1 (gibberellin 20 oxidase 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189 bits (480), Expect = 5.60e-57
Identity = 91/102 (89.22%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKETFSFGFDHC S NNEP VVDFFSS LG EF+EIG +YEKYCEAMRDL LALT
Sbjct: 113 SSKLPWKETFSFGFDHCKSSNNEPLVVDFFSSMLGHEFQEIGALYEKYCEAMRDLGLALT 172

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 102
           ELLGISLG+ERSHFRKFFEDGSSIMRLNSYPICEQG VALGT
Sbjct: 173 ELLGISLGVERSHFRKFFEDGSSIMRLNSYPICEQGSVALGT 214

[Close]

BLAST of Cucsat.G6453 vs. NCBI nr
Match: XP_022939151.1 (gibberellin 20 oxidase 3-like [Cucurbita moschata] >KAG7016454.1 Gibberellin 20 oxidase 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 188 bits (477), Expect = 1.62e-56
Identity = 90/102 (88.24%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKETFSFGFDHC + NNEP VVDFFSS LG EF+EIG +YEKYCEAMRDL LALT
Sbjct: 113 SSKLPWKETFSFGFDHCKTSNNEPLVVDFFSSILGHEFQEIGALYEKYCEAMRDLGLALT 172

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 102
           ELLGISLG+ERSHFRKFFEDGSSIMRLNSYPICEQG VALGT
Sbjct: 173 ELLGISLGVERSHFRKFFEDGSSIMRLNSYPICEQGSVALGT 214

[Close]

BLAST of Cucsat.G6453 vs. ExPASy TrEMBL
Match: S0BE44 (GA 20-oxidase OS=Cucumis sativus OX=3659 GN=GA20ox5 PE=2 SV=1)

HSP 1 Score: 210 bits (535), Expect = 3.01e-65
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT
Sbjct: 140 SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 199

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 102
           ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT
Sbjct: 200 ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 241

[Close]

BLAST of Cucsat.G6453 vs. ExPASy TrEMBL
Match: A0A5D3D529 (Gibberellin 20 oxidase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00180 PE=3 SV=1)

HSP 1 Score: 206 bits (524), Expect = 1.36e-63
Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSS LGKEFKEIGVIYEKYCEAMRDLSLALT
Sbjct: 140 SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSALGKEFKEIGVIYEKYCEAMRDLSLALT 199

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 102
           ELLGISLGLERSHFR FFEDGSSIMRLNSYPICEQGGVALGT
Sbjct: 200 ELLGISLGLERSHFRMFFEDGSSIMRLNSYPICEQGGVALGT 241

[Close]

BLAST of Cucsat.G6453 vs. ExPASy TrEMBL
Match: A0A1S3B3S2 (gibberellin 20 oxidase 3 OS=Cucumis melo OX=3656 GN=LOC103485678 PE=3 SV=1)

HSP 1 Score: 206 bits (524), Expect = 1.36e-63
Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSS LGKEFKEIGVIYEKYCEAMRDLSLALT
Sbjct: 140 SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSALGKEFKEIGVIYEKYCEAMRDLSLALT 199

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 102
           ELLGISLGLERSHFR FFEDGSSIMRLNSYPICEQGGVALGT
Sbjct: 200 ELLGISLGLERSHFRMFFEDGSSIMRLNSYPICEQGGVALGT 241

[Close]

BLAST of Cucsat.G6453 vs. ExPASy TrEMBL
Match: A0A6J1FF43 (gibberellin 20 oxidase 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445146 PE=3 SV=1)

HSP 1 Score: 188 bits (477), Expect = 7.86e-57
Identity = 90/102 (88.24%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKETFSFGFDHC + NNEP VVDFFSS LG EF+EIG +YEKYCEAMRDL LALT
Sbjct: 113 SSKLPWKETFSFGFDHCKTSNNEPLVVDFFSSILGHEFQEIGALYEKYCEAMRDLGLALT 172

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 102
           ELLGISLG+ERSHFRKFFEDGSSIMRLNSYPICEQG VALGT
Sbjct: 173 ELLGISLGVERSHFRKFFEDGSSIMRLNSYPICEQGSVALGT 214

[Close]

BLAST of Cucsat.G6453 vs. ExPASy TrEMBL
Match: A0A6J1JYA4 (gibberellin 20 oxidase 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489390 PE=3 SV=1)

HSP 1 Score: 187 bits (474), Expect = 2.22e-56
Identity = 89/102 (87.25%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKETFSFGFDHC + NNEP VVDFFSS LG EF+EIG +YEKYCEAMRDL LALT
Sbjct: 113 SSKLPWKETFSFGFDHCKTSNNEPLVVDFFSSMLGHEFQEIGALYEKYCEAMRDLGLALT 172

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 102
           ELLGISLG+ERSHFRKFFEDGSSIMRLNSYPICEQG +ALGT
Sbjct: 173 ELLGISLGVERSHFRKFFEDGSSIMRLNSYPICEQGSLALGT 214

[Close]

BLAST of Cucsat.G6453 vs. TAIR 10
Match: AT5G51810.1 (gibberellin 20 oxidase 2 )

HSP 1 Score: 119.8 bits (299), Expect = 1.3e-27
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           S+KLPWKET SF F + NS     +V D+FS TLG+EF++ G +Y+ YCEAM  LSL + 
Sbjct: 143 STKLPWKETLSFQFSNDNS--GSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIM 202

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 103
           ELLG+SLG+ R +FR FFE+  SIMRLN YP C+   + LGT
Sbjct: 203 ELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGT 242

[Close]

BLAST of Cucsat.G6453 vs. TAIR 10
Match: AT4G25420.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 5.4e-26
Identity = 54/102 (52.94%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           S+KLPWKET SF F  C+  +   SV D+F   LG  F+  G +Y++YCEAM  LSL + 
Sbjct: 145 STKLPWKETLSFRF--CDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIM 204

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 103
           ELLG+SLG++R +FR+FFE+  SIMRLN YP C +  + LGT
Sbjct: 205 ELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGT 244

[Close]

BLAST of Cucsat.G6453 vs. TAIR 10
Match: AT5G07200.1 (gibberellin 20-oxidase 3 )

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALT 60
           SSKLPWKET SF F      +++ +V DF S  +G  +++ G +Y++Y EAM  LSL + 
Sbjct: 143 SSKLPWKETLSFKFSPEEKIHSQ-TVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIM 202

Query: 61  ELLGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 103
           ELLG+SLG+ER +F++FFED  SI RLN YP C+Q  +ALGT
Sbjct: 203 ELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGT 243

[Close]

BLAST of Cucsat.G6453 vs. TAIR 10
Match: AT1G60980.1 (gibberellin 20-oxidase 4 )

HSP 1 Score: 108.2 bits (269), Expect = 3.9e-24
Identity = 51/100 (51.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 4   LPWKETFSFGFDHC-NSFNNEPSVVDFFSSTLGKEFKEIGVIYEKYCEAMRDLSLALTEL 63
           LPWKET SF F     S N   +V ++ S T+G  +K+ G +Y++Y E M +LSL + EL
Sbjct: 145 LPWKETLSFSFSPTEKSENYSQTVKNYISKTMGDGYKDFGSVYQEYAETMSNLSLKIMEL 204

Query: 64  LGISLGLERSHFRKFFEDGSSIMRLNSYPICEQGGVALGT 103
           LG+SLG++R HFR+FFED  SI RLN YP C+Q  + LGT
Sbjct: 205 LGMSLGIKREHFREFFEDNESIFRLNYYPKCKQPDLVLGT 244

[Close]

BLAST of Cucsat.G6453 vs. TAIR 10
Match: AT1G44090.1 (gibberellin 20-oxidase 5 )

HSP 1 Score: 95.1 bits (235), Expect = 3.4e-20
Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 0


Query: 1   SSKLPWKETFSFGFDHCNSFNNEPSVV-DFFSSTLGKEFKEIGVIYEKYCEAMRDLSLAL 60
           SS LPW ET +  F         P VV DF +S LG   +EIG +++++C+AM  L + L
Sbjct: 148 SSNLPWNETLTLAFK-----KGPPHVVEDFLTSRLGNHRQEIGQVFQEFCDAMNGLVMDL 207

Query: 61  TELLGISLGL-ERSHFRKFFEDGSSIMRLNSYPICEQGGVALG 102
            ELLGIS+GL +R+++R+FFEDGS I R N YP C+Q   ALG
Sbjct: 208 MELLGISMGLKDRTYYRRFFEDGSGIFRCNYYPPCKQPEKALG 245

The following BLAST results are available for this feature:

BLAST of Cucsat.G6453 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39111	1.8e-26	55.88	Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana OX=3702 GN=GA20OX2 PE=2 SV=1	[more]
P0C5H5	4.5e-25	54.90	Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica OX=39946 GN=20ox2 PE=1 SV...	[more]
Q0JH50	4.5e-25	54.90	Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GA20OX2 PE=...	[more]
Q39110	7.6e-25	52.94	Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=GA20OX1 PE=2 SV=2	[more]
Q39112	2.5e-23	51.96	Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana OX=3702 GN=GA20OX3 PE=2 SV=1	[more]

BLAST of Cucsat.G6453 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144295.2	6.21e-65	100.00	gibberellin 20 oxidase 1-D [Cucumis sativus] >KGN47512.1 hypothetical protein Cs...	[more]
XP_008441598.1	2.81e-63	98.04	PREDICTED: gibberellin 20 oxidase 3 [Cucumis melo] >TYK18655.1 gibberellin 20 ox...	[more]
XP_038885915.1	9.33e-59	92.23	gibberellin 20 oxidase 3-like [Benincasa hispida]	[more]
XP_023550661.1	5.60e-57	89.22	gibberellin 20 oxidase 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939151.1	1.62e-56	88.24	gibberellin 20 oxidase 3-like [Cucurbita moschata] >KAG7016454.1 Gibberellin 20 ...	[more]

BLAST of Cucsat.G6453 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
S0BE44	3.01e-65	100.00	GA 20-oxidase OS=Cucumis sativus OX=3659 GN=GA20ox5 PE=2 SV=1	[more]
A0A5D3D529	1.36e-63	98.04	Gibberellin 20 oxidase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B3S2	1.36e-63	98.04	gibberellin 20 oxidase 3 OS=Cucumis melo OX=3656 GN=LOC103485678 PE=3 SV=1	[more]
A0A6J1FF43	7.86e-57	88.24	gibberellin 20 oxidase 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445146 PE=3...	[more]
A0A6J1JYA4	2.22e-56	87.25	gibberellin 20 oxidase 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489390 PE=3 S...	[more]

BLAST of Cucsat.G6453 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51810.1	1.3e-27	55.88	gibberellin 20 oxidase 2	[more]
AT4G25420.1	5.4e-26	52.94	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT5G07200.1	1.7e-24	51.96	gibberellin 20-oxidase 3	[more]
AT1G60980.1	3.9e-24	51.00	gibberellin 20-oxidase 4	[more]
AT1G44090.1	3.4e-20	48.54	gibberellin 20-oxidase 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027443	Isopenicillin N synthase-like superfamily	GENE3D	2.60.120.330		coord: 1..102 e-value: 1.9E-13 score: 52.7
None	No IPR available	PANTHER	PTHR47990	2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED	coord: 2..102
None	No IPR available	PANTHER	PTHR47990:SF86	GIBBERELLIN 20 OXIDASE 5	coord: 2..102
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 2..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G6453.T1	Cucsat.G6453.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0009908	flower development
biological_process	GO:0009686	gibberellin biosynthetic process
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0002238	response to molecule of fungal origin
biological_process	GO:0009826	unidimensional cell growth
molecular_function	GO:0045544	gibberellin 20-oxidase activity
molecular_function	GO:0046872	metal ion binding