Cucsat.G6303 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCTGTGTTGCGTCTTATTACGTGTAAAACCCCTCATAACGCTGAACTGAGGTTTCCTTTCTTCCTTTTCTCACATCTTCATTCTATTTGCTCAATTCCTCAAAATGAGCCCTCGTTCACGCCTTCCACTCCACAGATTCCTTCTTCGGATATCTCAGCCTTCAATTTCTTCATCTTCCTCTACCTTCCGCCCAATTCTGGACTTCTCTGTGAAGCCATGGCGAGCAGATGATCTCCATTTTCCCTACCTAATGAGCTTGAATAGTCGGTTCGTATCGCTTCACTGTTTTCGGAGTTACAGCGGTGCTTCGGGCTCGTCGGAGCCCGATTTCGATCAGGTTAGAGAGGTGGACAGGATCAATCTCAAGTTCGCCGAAGCTAGAGAAGAAATTGAGTTAGCTATGGAGTCTAAAGAGACTGTATATTTTGATGAAGAGGCTGAGTGTGCTCGGGATGCTGTCAAAGAAGTTTTAGAACTGTACGAGGGGCTTCTGGCGAAGTTGTCTGACAGCGAAAGGAAGGCGCTGCAGAGGTCAATGGGGCTTAAGATTGAGCAGCTAAAGGCTGAGCTTAATCAGCTTGACGAGTAATTGAGGTTCATGTATTTTATTTTGTTCTTCCCAATTTTCAACATATCAAATTCCCATTCAGGTTCTTACTTGATTGCTGCTTGTGACTGGGATAGCAAATCTGGCGTTAATAATTC ATGAGCCCTCGTTCACGCCTTCCACTCCACAGATTCCTTCTTCGGATATCTCAGCCTTCAATTTCTTCATCTTCCTCTACCTTCCGCCCAATTCTGGACTTCTCTGTGAAGCCATGGCGAGCAGATGATCTCCATTTTCCCTACCTAATGAGCTTGAATAGTCGGTTCGTATCGCTTCACTGTTTTCGGAGTTACAGCGGTGCTTCGGGCTCGTCGGAGCCCGATTTCGATCAGGTTAGAGAGGTGGACAGGATCAATCTCAAGTTCGCCGAAGCTAGAGAAGAAATTGAGTTAGCTATGGAGTCTAAAGAGACTGTATATTTTGATGAAGAGGCTGAGTGTGCTCGGGATGCTGTCAAAGAAGTTTTAGAACTGTACGAGGGGCTTCTGGCGAAGTTGTCTGACAGCGAAAGGAAGGCGCTGCAGAGGTCAATGGGGCTTAAGATTGAGCAGCTAAAGGCTGAGCTTAATCAGCTTGACGAGTAA MSPRSRLPLHRFLLRISQPSISSSSSTFRPILDFSVKPWRADDLHFPYLMSLNSRFVSLHCFRSYSGASGSSEPDFDQVREVDRINLKFAEAREEIELAMESKETVYFDEEAECARDAVKEVLELYEGLLAKLSDSERKALQRSMGLKIEQLKAELNQLDE Homology
BLAST of Cucsat.G6303 vs. ExPASy Swiss-Prot
Match: Q9M9H3 (Embryogenesis-like protein OS=Arabidopsis thaliana OX=3702 GN=EML PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.8e-28 Identity = 70/109 (64.22%), Postives = 89/109 (81.65%), Query Frame = 0
BLAST of Cucsat.G6303 vs. NCBI nr
Match: XP_004140949.1 (uncharacterized protein LOC101219561 [Cucumis sativus] >KGN46106.1 hypothetical protein Csa_005419 [Cucumis sativus]) HSP 1 Score: 305 bits (782), Expect = 2.17e-104 Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0
BLAST of Cucsat.G6303 vs. NCBI nr
Match: XP_008456723.1 (PREDICTED: uncharacterized protein LOC103496582 [Cucumis melo] >KAA0031626.1 uncharacterized protein E6C27_scaffold139G003950 [Cucumis melo var. makuwa] >TYK04483.1 uncharacterized protein E5676_scaffold409G00930 [Cucumis melo var. makuwa]) HSP 1 Score: 273 bits (697), Expect = 1.97e-91 Identity = 146/161 (90.68%), Postives = 150/161 (93.17%), Query Frame = 0
BLAST of Cucsat.G6303 vs. NCBI nr
Match: XP_038885743.1 (uncharacterized protein LOC120076030 [Benincasa hispida]) HSP 1 Score: 220 bits (560), Expect = 1.37e-70 Identity = 127/168 (75.60%), Postives = 136/168 (80.95%), Query Frame = 0
BLAST of Cucsat.G6303 vs. NCBI nr
Match: XP_022990474.1 (uncharacterized protein LOC111487326 [Cucurbita maxima] >XP_022990475.1 uncharacterized protein LOC111487326 [Cucurbita maxima]) HSP 1 Score: 218 bits (555), Expect = 1.06e-69 Identity = 123/168 (73.21%), Postives = 134/168 (79.76%), Query Frame = 0
BLAST of Cucsat.G6303 vs. NCBI nr
Match: KAG6602205.1 (hypothetical protein SDJN03_07438, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213 bits (541), Expect = 1.44e-67 Identity = 121/168 (72.02%), Postives = 133/168 (79.17%), Query Frame = 0
BLAST of Cucsat.G6303 vs. ExPASy TrEMBL
Match: A0A0A0KEB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052810 PE=4 SV=1) HSP 1 Score: 305 bits (782), Expect = 1.05e-104 Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 0
BLAST of Cucsat.G6303 vs. ExPASy TrEMBL
Match: A0A5D3BXL9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00930 PE=4 SV=1) HSP 1 Score: 273 bits (697), Expect = 9.55e-92 Identity = 146/161 (90.68%), Postives = 150/161 (93.17%), Query Frame = 0
BLAST of Cucsat.G6303 vs. ExPASy TrEMBL
Match: A0A1S3C573 (uncharacterized protein LOC103496582 OS=Cucumis melo OX=3656 GN=LOC103496582 PE=4 SV=1) HSP 1 Score: 273 bits (697), Expect = 9.55e-92 Identity = 146/161 (90.68%), Postives = 150/161 (93.17%), Query Frame = 0
BLAST of Cucsat.G6303 vs. ExPASy TrEMBL
Match: A0A6J1JQ75 (uncharacterized protein LOC111487326 OS=Cucurbita maxima OX=3661 GN=LOC111487326 PE=4 SV=1) HSP 1 Score: 218 bits (555), Expect = 5.15e-70 Identity = 123/168 (73.21%), Postives = 134/168 (79.76%), Query Frame = 0
BLAST of Cucsat.G6303 vs. ExPASy TrEMBL
Match: A0A6J1HL89 (uncharacterized protein LOC111464557 OS=Cucurbita moschata OX=3662 GN=LOC111464557 PE=4 SV=1) HSP 1 Score: 211 bits (536), Expect = 4.01e-67 Identity = 120/168 (71.43%), Postives = 133/168 (79.17%), Query Frame = 0
BLAST of Cucsat.G6303 vs. TAIR 10
Match: AT1G71730.1 (unknown protein; Has 52 Blast hits to 52 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29 Identity = 70/109 (64.22%), Postives = 89/109 (81.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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