Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATTCAGCTACCTTCATGAGAAAAAGCTTATATCATCAATGGTCTCAAAAATGGCATCCTCCCCCATGAAGATTTCCCTTATGTTGAAGCTGCTTTTCTTTGCTACTTTGCTTTTCATTGCCTATACTACTATTTCTGCAACAAACAACATTCCTTTGCTCCACAAACCTCCTATTCGTAAGTTCTCTTTTTCCCATTATTTTATCATTATTATAAATGAATATATAAAATAAAATCTATTTTAGTACACAAGCAAAGAAACATATACTTCCCTTTAAAAGAAATGGGAGCTAAGTTGGTAAGAAAACGATAGAGGTTGTTTGGAGAGGTGATATGAGCACAACAACCAATTTGGGGGTGATGGTAAAATATGAAAATGGTGGAAAAGAGGGTTGAGTCGAATAAAATGCCTTCAGCATTAAAAATCGAGTCCAAAATGTTTAATAAAAACAAAACATGCGTTTTGGATTACATTACACTATAAACAAATTACATCAGGGACATCCAAACGCCTCCATAGTTTCATTTTGAATTTTGTTAAATCACTAACTTACTGATTGATGTAAACGAGCTAATGAACGAAAGCTAATTTAATATTACACTACAAGAAATTGGGGATCTCTCAACGCATCATGTCATCGAGATATTACAAAATGGCAGCAGGAGTAGTTCTCCTGAAGACTAAATAGTCGTTGCAAATGTGGTTGAAAAAACCACCTCGAGAGAGGATGCAAGGTGTCAAGAATGGATCATTCCCGATGCACCATTAATACGGTGTTGAGAGTTTTGAACTCCCGACACATTTCATTTATGCATCGGAAACGTATCATTCTAGACGATGCAATCGTGTCGGGAATGGACGTCCCAACACCCAATGCATAAGTGAAACCGTTGAAAATTGAGGAGCTTCAACTCCTGACGGCGTACGTTGGAAATTGTTACATTTTTATTTCTTTTTTTAATTATTATTTTATTTTATTTTTTTAGGTATACCTCGGTGCTATTTCGTTTTCAGTTTCGATCTAAAATTCAATAAAATAGCTTAACAAAATGTTATGAGTTAATTAATATAACTAAACTAAAATAGGAAAGTTCCAACTACAAAATTGGAACATATATTTCATAACAAACATAGAACACATGTTTCATAACAATGTGCTTTTAAAATAATAAGTATATATAAAAAAAGACGTCGATCATTTAACAAAAATCTCCCCTACGATTTCAGGTAAAATGGCTGTGGGGTACAGAAAAGGTGAGAAGGCTGTGGTTGTACCAAAAGTATATAAACCAACTTCTGCTGATTTTCCATGGGGTGGAGGCTATGTTCGTCGTCCTCCAATTTTAAACAACCCATGATATATGAAGCTTTACAATTGTTTGGATGATCATCAGCTATGTTTGTCTTTTGTGGAGCGTCAATCTCTAAGTCTTCTTTACCC
Coding sequence (CDS)
CTATTCAGCTACCTTCATGAGAAAAAGCTTATATCATCAATGGTCTCAAAAATGGCATCCTCCCCCATGAAGATTTCCCTTATGTTGAAGCTGCTTTTCTTTGCTACTTTGCTTTTCATTGCCTATACTACTATTTCTGCAACAAACAACATTCCTTTGCTCCACAAACCTCCTATTCGTAAAATGGCTGTGGGGTACAGAAAAGGTGAGAAGGCTGTGGTTGTACCAAAAGTATATAAACCAACTTCTGCTGATTTTCCATGGGGTGGAGGCTATGTTCGTCGTCCTCCAATTTTAAACAACCCATGA
Protein sequence
LFSYLHEKKLISSMVSKMASSPMKISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAVVVPKVYKPTSADFPWGGGYVRRPPILNNP
Homology
BLAST of Cucsat.G616 vs. NCBI nr
Match:
KAE8650427.1 (hypothetical protein Csa_010020 [Cucumis sativus])
HSP 1 Score: 176 bits (446), Expect = 3.20e-55
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
Query: 14 MVSKMASSPMKISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAV 73
MVSKMASSPMKISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAV
Sbjct: 1 MVSKMASSPMKISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAV 60
Query: 74 VVPKVYKPTSADFPWGGGYVRRPPILNNP 102
VVPKVYKPTSADFPWGGGYVRRPPILNNP
Sbjct: 61 VVPKVYKPTSADFPWGGGYVRRPPILNNP 89
BLAST of Cucsat.G616 vs. NCBI nr
Match:
KAA0067663.1 (hypothetical protein E6C27_scaffold70G00320 [Cucumis melo var. makuwa] >TYK23667.1 hypothetical protein E5676_scaffold577G00330 [Cucumis melo var. makuwa])
HSP 1 Score: 144 bits (364), Expect = 9.12e-43
Identity = 73/85 (85.88%), Postives = 77/85 (90.59%), Query Frame = 0
Query: 18 MASSPMKISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAVVVPK 77
MASSPMKISLMLKLLFFA LLFIA TT+SATNNIPLLHKPPIRKM V Y+KGEKAVVVPK
Sbjct: 1 MASSPMKISLMLKLLFFANLLFIASTTVSATNNIPLLHKPPIRKMGVEYKKGEKAVVVPK 60
Query: 78 VYKPTSADFPWGGGYVRRPPILNNP 102
V +PTS D PWGGGYV RPPILN+P
Sbjct: 61 VNRPTSDDVPWGGGYVHRPPILNSP 85
BLAST of Cucsat.G616 vs. NCBI nr
Match:
KAE8650426.1 (hypothetical protein Csa_009889 [Cucumis sativus])
HSP 1 Score: 85.1 bits (209), Expect = 3.85e-19
Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 0
Query: 14 MVSKMASSPMKISLMLKLLFFATLLFIAYTTISATNNI--PLLHKPPIRKMAVGYRKGE- 73
M KMAS P +I L+LKLLFF+ LL ++T+S TNN+ PL HKP IRK+ V + +
Sbjct: 1 MPQKMAS-PWRIPLLLKLLFFSLLLI--FSTVSTTNNVVQPLFHKPRIRKIGVDKKTNDG 60
Query: 74 KAVVVPKVYKPTSADFPWGGGYVRRPPILNNP 102
KA VVP+V KPTS DFPWGGGY+ P L+NP
Sbjct: 61 KAGVVPRVIKPTSEDFPWGGGYIH--PHLSNP 87
BLAST of Cucsat.G616 vs. NCBI nr
Match:
KAG7014832.1 (hypothetical protein SDJN02_22461 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 60.8 bits (146), Expect = 1.10e-09
Identity = 40/78 (51.28%), Postives = 49/78 (62.82%), Query Frame = 0
Query: 24 KISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAVVVPKVYKPTS 83
+ISL+L+LLFFA LL +T SA N+ LLH P KMA+ Y + K KPT+
Sbjct: 8 RISLLLRLLFFALLL--VASTASAANSKALLHNPRTPKMAMEYGQVGKGTSK----KPTA 67
Query: 84 ADFPWGGGYVRRPPILNN 101
D PWGGGYV PPIL+N
Sbjct: 68 DDVPWGGGYV--PPILSN 77
BLAST of Cucsat.G616 vs. NCBI nr
Match:
KAG6600177.1 (hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 48.9 bits (115), Expect = 4.29e-05
Identity = 35/68 (51.47%), Postives = 41/68 (60.29%), Query Frame = 0
Query: 25 ISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAVVVPKVYKPTSA 84
IS +LKLL LL IA + ISA +N P IRKM + Y+ KAVVV K + SA
Sbjct: 7 ISFVLKLLVCFALLLIA-SPISAMDNTPR-----IRKMGMEYKLVGKAVVVAKPVRQLSA 66
Query: 85 DFPWGGGY 92
D PWGGGY
Sbjct: 67 DSPWGGGY 68
BLAST of Cucsat.G616 vs. ExPASy TrEMBL
Match:
A0A0A0L8B2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175600 PE=4 SV=1)
HSP 1 Score: 169 bits (429), Expect = 5.38e-53
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
Query: 18 MASSPMKISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAVVVPK 77
MASSPMKISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAVVVPK
Sbjct: 1 MASSPMKISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAVVVPK 60
Query: 78 VYKPTSADFPWGGGYVRRPPILNNP 102
VYKPTSADFPWGGGYVRRPPILNNP
Sbjct: 61 VYKPTSADFPWGGGYVRRPPILNNP 85
BLAST of Cucsat.G616 vs. ExPASy TrEMBL
Match:
A0A5D3DJ60 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00330 PE=4 SV=1)
HSP 1 Score: 144 bits (364), Expect = 4.41e-43
Identity = 73/85 (85.88%), Postives = 77/85 (90.59%), Query Frame = 0
Query: 18 MASSPMKISLMLKLLFFATLLFIAYTTISATNNIPLLHKPPIRKMAVGYRKGEKAVVVPK 77
MASSPMKISLMLKLLFFA LLFIA TT+SATNNIPLLHKPPIRKM V Y+KGEKAVVVPK
Sbjct: 1 MASSPMKISLMLKLLFFANLLFIASTTVSATNNIPLLHKPPIRKMGVEYKKGEKAVVVPK 60
Query: 78 VYKPTSADFPWGGGYVRRPPILNNP 102
V +PTS D PWGGGYV RPPILN+P
Sbjct: 61 VNRPTSDDVPWGGGYVHRPPILNSP 85
BLAST of Cucsat.G616 vs. ExPASy TrEMBL
Match:
A0A0A0L653 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175590 PE=4 SV=1)
HSP 1 Score: 84.3 bits (207), Expect = 3.37e-19
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 0
Query: 20 SSPMKISLMLKLLFFATLLFIAYTTISATNNI--PLLHKPPIRKMAVGYRKGE-KAVVVP 79
+SP +I L+LKLLFF+ LL ++T+S TNN+ PL HKP IRK+ V + + KA VVP
Sbjct: 2 ASPWRIPLLLKLLFFSLLLI--FSTVSTTNNVVQPLFHKPRIRKIGVDKKTNDGKAGVVP 61
Query: 80 KVYKPTSADFPWGGGYVRRPPILNNP 102
+V KPTS DFPWGGGY+ P L+NP
Sbjct: 62 RVIKPTSEDFPWGGGYIH--PHLSNP 83
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAE8650427.1 | 3.20e-55 | 100.00 | hypothetical protein Csa_010020 [Cucumis sativus] | [more] |
KAA0067663.1 | 9.12e-43 | 85.88 | hypothetical protein E6C27_scaffold70G00320 [Cucumis melo var. makuwa] >TYK23667... | [more] |
KAE8650426.1 | 3.85e-19 | 56.52 | hypothetical protein Csa_009889 [Cucumis sativus] | [more] |
KAG7014832.1 | 1.10e-09 | 51.28 | hypothetical protein SDJN02_22461 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6600177.1 | 4.29e-05 | 51.47 | hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L8B2 | 5.38e-53 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175600 PE=4 SV=1 | [more] |
A0A5D3DJ60 | 4.41e-43 | 85.88 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0L653 | 3.37e-19 | 55.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175590 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |