Cucsat.G6004 (gene) Cucumber (B10) v3

Overview
NameCucsat.G6004
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description40S ribosomal protein S25
Locationctg1425: 562882 .. 564583 (-)
RNA-Seq ExpressionCucsat.G6004
SyntenyCucsat.G6004
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCTTCTTTCCCTTCCAGCCGAAGCCCTTGGAACTCTTCACTCAAACCCTAGAAACCAAATCTCATGGTGAGTTTCTTTCCTCTTGCCGATTCGATGAACTTGTTCTTCCCTTTGATTCTTCTTTCGTCTTTGGAACTTCCGGTGTACTGATTCTACATGATGTGATATCTTTTGTTGTCTTCGTTTTGAATCTTAGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCCAAACCTGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGGTAAGCTTTTTAAATTTAAGTTCTGCTAGCTGTTATATTATTAGTATGTTGATACTTGTTTAATCTCATCGTTCAGGATCATTAGATAAGATTTAGTCGTTTTAATTTCTTCTTGTTGATAGCATTAACTGCTCTTTTCGAAGTTTGCAGCGTTGTACTTTTTTTCGATACTGGAATTTGGAATTATCTTTAGTAATTTGATCTTCTTACGTCGTGTAGCATTTCGTTTTTTCGTCATACTGATAACGAGATAGTGACGTTTATATTTGATTAGAATTGGAATGAAAGGACGATAAAAACCAGTTAGGATAGGGACCCTAAACCTTGAAAAATACTATGAGATTTTTTAAGGATGGCGATGTTTATTGAGTTTGAGGAAGAGTTTGATTTTTGGTATTCATTGTAGTATGGCCATTCTTGTTATTTTACATGATCAGTATCACTTGGTTTGCAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGAACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGAATGAGGGTATGTCTTTTTCTTCTTTTTCTATCCATCAATTTCCCAATTTTATTGAATTATTTTGTTGTTCTTGTTTAGAAAAAGTACAAATCTGCTTTTGTTTTCCGATGTGGAATGAGGGTTGTTAACACCTAAAGGGTTTACCAAATGACTGATTGATTTGTTACTAATTGCACCCTCTATAGCAATTTACTAATGGTTTCCTTTGCCATGTGCAATTACCAGGTTAATGGATCGCTAGCAAGAAGAGCAATTAAGGATTTGATGGCTAGAGGTTCCATCAGAATGATATCAGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAAGGACAACAATTCATGTCACTTATGCCCGAAAGGGTATATATGATATGTAGTTGCCTTTCCATTTTGCAATTCCAAATTTTGTTGAGTGATCAAATGAACTCTAAATGTGACGTTTTTAATTTGTTTGCGTTGCGGGTCTTGACTTGTTTGATGAATTGTGTCACATTAGCTGGTATTTGCCTTTTCTTTTCTACTGCCAAATACTAACAATAATGTTTGTATGTAGAATCTCGTTCTAGATGTAAGTTGGTAAACTAATGTGGCTCTGACATTAGCGTTGTTTGAACAATTCTTAGATTTCGTCTCACTATGTTGAGAAAAACAAGATGATTTCAGGGTCAGGTTTAATCTAAAATCTACTTTCAATATTGATTTTCTTTTGTTTAATTTTTAATAATAAGTCATTTTTAAGCTAAATAATCAAAATAATTTTCATTTTTGAAAAGGTATTTATAATCGCTTGATCTTGGATAATCATGACTTTAAATAACTATCTTATCTTGAATA

Coding sequence (CDS)

ATGGCGCCGAAGAAGGACAAGGCTCCTCCACCGTCCTCCAAACCTGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGTAAGCAAAAGGAGAAGGTGAACAACATGGTTTTGTTTGATCAGGGAACTTATGATAAGCTCCTTTCTGAAGTTCCCAAGTACAAGCTAGTCACTCCGTCTATCCTTTCTGATAGAATGAGGGTTAATGGATCGCTAGCAAGAAGAGCAATTAAGGATTTGATGGCTAGAGGTTCCATCAGAATGATATCAGCTCACTCGAGTCAGCAGATCTACACCAGAGCAACCAACACCTAA

Protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKLVTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Homology
[Close]
BLAST of Cucsat.G6004 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-47
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDRMR+NGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.9e-46
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDRMR+NGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 8.3e-46
Identity = 94/107 (87.85%), Postives = 104/107 (97.20%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATN 108
           +TPSILSDR+R+NGSLARRAI++LMA+G+IRM+SAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]
BLAST of Cucsat.G6004 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.3e-46
Identity = 94/108 (87.04%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLLSE PKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPS+LSDR+R++GSLAR+AI+DLMARGSIRM+SAH+SQQIYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-43
Identity = 90/106 (84.91%), Postives = 100/106 (94.34%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+SE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRAT 107
           +TPSILSDR+R+NGSLAR+AI+DLM +G+IRM+S HSSQQI TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]
BLAST of Cucsat.G6004 vs. NCBI nr
Match: XP_004140903.1 (40S ribosomal protein S25-2 [Cucumis sativus] >KGN46039.1 hypothetical protein Csa_005769 [Cucumis sativus])

HSP 1 Score: 204 bits (520), Expect = 3.81e-66
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108
           VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. NCBI nr
Match: XP_008456601.1 (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_022134525.1 40S ribosomal protein S25-2-like [Momordica charantia] >TYK11764.1 40S ribosomal protein S25-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 203 bits (516), Expect = 1.55e-65
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. NCBI nr
Match: XP_022953196.1 (40S ribosomal protein S25-2 [Cucurbita moschata] >XP_023533034.1 40S ribosomal protein S25-2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533042.1 40S ribosomal protein S25-2 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6602255.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202 bits (515), Expect = 2.21e-65
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108
           +TPSILSDRMR+NGSLARRAIKDLMARGSIRMISAHSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQEIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. NCBI nr
Match: XP_038885543.1 (40S ribosomal protein S25 [Benincasa hispida])

HSP 1 Score: 201 bits (511), Expect = 9.00e-65
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAH SQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHPSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. NCBI nr
Match: XP_021897361.1 (40S ribosomal protein S25 [Carica papaya])

HSP 1 Score: 200 bits (508), Expect = 2.58e-64
Identity = 104/108 (96.30%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108
           VTPSILSDR+R++GSLARRAIKDLMARGSIRMISAH+SQQIYTRATNT
Sbjct: 61  VTPSILSDRLRISGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. ExPASy TrEMBL
Match: A0A0A0KB40 (40S ribosomal protein S25 OS=Cucumis sativus OX=3659 GN=Csa_6G045180 PE=3 SV=1)

HSP 1 Score: 204 bits (520), Expect = 1.85e-66
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108
           VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. ExPASy TrEMBL
Match: A0A5D3CKR9 (40S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00850 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 7.52e-66
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. ExPASy TrEMBL
Match: A0A6J1BYI5 (40S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111006746 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 7.52e-66
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. ExPASy TrEMBL
Match: A0A1S3C4W3 (40S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103496510 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 7.52e-66
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108
           VTPSILSDR+R+NGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. ExPASy TrEMBL
Match: A0A6J1GMB9 (40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111455806 PE=3 SV=1)

HSP 1 Score: 202 bits (515), Expect = 1.07e-65
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108
           +TPSILSDRMR+NGSLARRAIKDLMARGSIRMISAHSSQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIKDLMARGSIRMISAHSSQEIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-48
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDRMR+NGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-47
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDRMR+NGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]
BLAST of Cucsat.G6004 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 184.1 bits (466), Expect = 5.9e-47
Identity = 94/107 (87.85%), Postives = 104/107 (97.20%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATN 108
           +TPSILSDR+R+NGSLARRAI++LMA+G+IRM+SAHSSQQIYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]
BLAST of Cucsat.G6004 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 183.0 bits (463), Expect = 1.3e-46
Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQGTYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDRMR+NGSLARRAI++LMA+G IRM+SAHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 107

[Close]
BLAST of Cucsat.G6004 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-45
Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRMRVNGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 109
           +TPSILSDRMR+NGSLARRAI++LMA+G IRM++AHSSQQIYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 107

The following BLAST results are available for this feature:
BLAST of Cucsat.G6004 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SIK22.6e-4789.8140S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1[more]
Q9T0292.9e-4687.9640S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1[more]
Q8GYL58.3e-4687.8540S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2[more]
P463018.3e-4687.0440S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1[more]
Q9SIW51.3e-4384.9140S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3[more]
BLAST of Cucsat.G6004 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140903.13.81e-66100.0040S ribosomal protein S25-2 [Cucumis sativus] >KGN46039.1 hypothetical protein C... [more]
XP_008456601.11.55e-6598.15PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_022134525.1 40S r... [more]
XP_022953196.12.21e-6597.2240S ribosomal protein S25-2 [Cucurbita moschata] >XP_023533034.1 40S ribosomal p... [more]
XP_038885543.19.00e-6597.2240S ribosomal protein S25 [Benincasa hispida][more]
XP_021897361.12.58e-6496.3040S ribosomal protein S25 [Carica papaya][more]
BLAST of Cucsat.G6004 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB401.85e-66100.0040S ribosomal protein S25 OS=Cucumis sativus OX=3659 GN=Csa_6G045180 PE=3 SV=1[more]
A0A5D3CKR97.52e-6698.1540S ribosomal protein S25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A6J1BYI57.52e-6698.1540S ribosomal protein S25 OS=Momordica charantia OX=3673 GN=LOC111006746 PE=3 SV... [more]
A0A1S3C4W37.52e-6698.1540S ribosomal protein S25 OS=Cucumis melo OX=3656 GN=LOC103496510 PE=3 SV=1[more]
A0A6J1GMB91.07e-6597.2240S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111455806 PE=3 SV=... [more]
BLAST of Cucsat.G6004 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G21580.11.8e-4889.81Ribosomal protein S25 family protein [more]
AT4G39200.12.0e-4787.96Ribosomal protein S25 family protein [more]
AT4G34555.15.9e-4787.85Ribosomal protein S25 family protein [more]
AT2G21580.21.3e-4688.89Ribosomal protein S25 family protein [more]
AT4G39200.21.5e-4587.04Ribosomal protein S25 family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G6004.T2Cucsat.G6004.T2mRNA
Cucsat.G6004.T1Cucsat.G6004.T1mRNA
Cucsat.G6004.T4Cucsat.G6004.T4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0022627 cytosolic small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome