Cucsat.G3673 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3673
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	zinc finger CCCH domain-containing protein 62-like
Location	ctg1047: 794884 .. 797999 (+)
RNA-Seq Expression	Cucsat.G3673
Synteny	Cucsat.G3673

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTATTCTGGTTCAAATCAAAGATCTGGTGATTCAGTTAATCTTTTGAACTCATTTTCAGGCTTCTCTTTTACTTTTTTAGCTTTGGCTTAATGGATTCAGATATCAGAGACTTGAAACTGAGTTAGAGGTGACTTCTAGATTTTACTTAAATGGCTAAGATGGGATCAGAAAAGTTAGTGTTTTGGTTTACCTCCAAGTGGGGGCGGTGCTGCCTGTACAAGTGTAAGAGCGATGTTAAACTTAGTATTCCAGATTAAGTAGACAAATACTTTACCATGTTTATTCACATTTTGATTACCTCTTCCTCCCAATATACATTTTTTGTTCCTTATACATTGAAAAAAAAATACCATTATATTTATTATATTAGTCCATCTTCCTTTGGCATAATCCATGTTGACAACTTCAGGTTTTCGAGCTTTGCTTTATGACTGTTGTGATTGTTGAGAATGAGTAGGATTAAGTGTACGATGTACATATTTCTTCTCTTGATTATGTTTCAAGTTAAAGATGTGGGTGCAAGAGATTCAAATTTTTTATCTCATGAATGTACTACATGCTTTAACTCTAATTTGTGAGGATATAGGCCTCTTTATAACAAAAAATTGGTAAAAGAAAATCGTCAATCTTCTCACTAGTAGGATAATCATCTAAACAGGGTAAAATGAGTTTAAGTAATATACTTTTTAATATAAGAAACAACCATATTTATTCAAGTTTAGTATAGTGAAATGATTCTGGCAGACAATTCGATTAGTTTGGGGGGAAAACTAATAAAAATGAAACCTAAACCCTAAACATTTTTAAATTTTCTATGGAAAAAAATTATAACATTTTTATATGAAAATATAATTTTTGATTTGGTTTCTAGTTTTCAAAATTGTTTCAAATTTTCAATTAGGTTTTAGATTTAAAGATTTATACTTTTATGGTTGATTTTTACTCCTTATTCATTCTTGTTATTATTGTTAATGTCTATGAATTGATTTCAATGATAAAAGATGATATTGTTCAAATAGTAATTGATCGTTACAATGTTATGACTGAGGATACCATAGAATTACTCAACAATGTTCTATATTATACAATAAATTAATAAGGACAACTCTCGTTAATCAATATCTACGTGCACTCCTAGCTGAATAGTTGGTTGATCTTTTTTTATGTTCAAAATGTTATATCGTCGCAAAAAAGTGGAATATCGTAGCAAGAAGTCAAAAAGAAAATTAATTAATAAATCAATATAATAAAGGAAGTGAGATCGCATCATAACATGAATATTTAATGAAAAATTAAGTGTAAATCTTAAAATTTATAGAACAAATTATAACGAAACACAAATCTTAATGATAAAATTATAGCATTTCCGATAAGAGTATAGCATTTGAAATCTAACAACAAATTGAAAATCAAACTAAATAGGAACCAAAAGTTATTTTCTCAAAACATAATAAGTAGGTCATTGGTCAAAATTTCTAAAATGGGCTGACTACTAGTAAGCCCATTTTCTCAGTCCAAAGCCCGAAATCTAAAGGCCCAATTTCCATTTTTTTATTGACTATCTAGCCGTTGCAATTTGAAAATTTTAATCATCTCTCCATTATATAGCCCTTGGCAGACCACAAAACTTGCCCCGTCCAAAACAGCGTTGAACAGAGAGTAATAAAATTTTGATGGCATTTTCTGGGAATCTTGGAACCGATCCTTCTCTCTTTGATCTAGAAGAAATTATCGATAACAATGGAGGATCCGACGACGACTATGATTCTGATGATTTAGAATGTGATCCAAGTTACAGCATTCAGAAAAGAACCAATTCGAAGACTTCAAGGACCTCGATCAGGAAGAAATTAAAGCCATTGTAAGTATTTGAATCTATTTAACTCATTTCTCATCTTGTTCGGTGTGTTCAACTATTATACTTGATTAATCGATATAGAGCTGGAACTCATTAGGTTTTTTTTTTTTTTTTTTTTCCATTTTGCAGGGATATTGTGGATACGAACCTGATTGAGGATTCAGATATAGATGATGTAGTGCCAAATATTCCGATTATAAATGAAAAAGATGAGAAAGATACTCGTGAAGTGCTATCAATCATTAAAGGTTAGTCAAATTTTTTGAATGGTTTCTTCCTATGAACAGAGAAGGTCATTAGTAATCTGAACTCTATAAGTTTTTTTCTCCTCTTTTTCCATTTCTTGTAAACAATCGATGTGCTCATAGCCTTAGGTACTGCTGAAGTATTATGATTTTGTGTTAAGTTTAGGAATAAAAGATTATTTGACGTACGGATTTCTATTCCCCTATGAATGTATTTGTTAGTTGTGAAGAGTAAAAACTCTAAAAAGATGTTCCCCTTTTGTGTAAATGAACTCAGAAACGATAGTTTCGACATTTTTTGGCTCCTCTTCTTTCTGGATAACCCATTTCTCTCTCATTCTTTGGACCTAGCTGGTGGTAAGCTTGAGAAACTCAAGGTAGAACAATGTAAATCTTATCTAAGAAATAATGGGTTGAGGCTGAGCGGAACAAAAGATGTGCTCATTCAGCGCATCAAGGAGCATTTAGAGTAAGTTTGTGTTGTATGTATGGTTGTTTTAGAATGGTTTTGAAAGGAGTTTATTGCTAACGACACATTTCTTTTCTCTCTCATTTTTAATTGTTTACAGGATTTTAAATGGTGGAGGGGAGAAGAAATACCCGGAGTATAGCTTTATAGTGAATTGTAAAGGTATGGTCTTAGTTACATGATGAGGATATTATGACGTCGAGAAGTATGTGGCTGTTTGAACTTGTAGAACGGTTTGTTTGTTCTCATTTTAATATGTTGCTGATTTTTAAGTGCACAGTTTTTCTAATTCTTGACAATTGTCTTTTTGTGCCTAGCTATTACTCAGTTTCTTGTTATTGTAGTTCTGTTCTCGTTTTCTGATGTTTATTTGATTCAGGTGATGCCTGCATGGGTGATATTGTTATGTTTGAACAAAAAGTATATGAGATGTAAGAATTAATTCAATGTATCTTATTCTAATTTTTCTTTTTCACTAATAATTGGCCTTCTATCTCTTTCATTCCACAAGGATCAAGATTTCAATTGCAATCTTTACGTGTGATAATGATAGAGATTGTAATCTTAGAGCACTGAAATTTCTCTTCCCCAAATCTGTACCTATCTACTAGTTTTCATGTCATGGATTGTTTCTTAATAGGACATTCATCATTCAGGTACAACATCGCATCTAGGAGCTCCACAGGTCCTTCATGTGGAACAAGAACGGTTGCTGGTCGCATTGTTAAAGAAAGCTATGGTTCTTCCAAACAGCAACATACATTTACGGTGAGACGAATTTTAAAAATGAATTACGAGGAATGACCGACTTAAGATGAAGCTTGGTTCTTTTTTAGTAGTTCTCTCCTTGAATTGTGTTACCAATTCTCATAGTAATTGTTATTATAAGCCAGCCTTTCCCTTTTTTTTTTTTTTTTTTTTTTTGAGCCAGATTGAAGTATTGTGGAGTAAGGGTGAGAAACCCCTTCCTCCACTTCATCCCCTTTTAATCAAAGGTCGAAACCTTTACCGGATGAAGACTATGAGACAGGTTACAGTTACACATTTTACATTCTTCCTTCGACTTTTCTTTTAAATATACTCTTTTAACTTTTCTTTTAAATAACCCATGTTATCAAATTTTGTAGCCTTGGGAAGATGAAGATGAAAGGCAGAAAGTTCTAATGGAAAAACATGCCAGGGGATCACTTGCAAGATCAAATAGGGAAGCACGTGTAATAGAGAAAGAAAAAAGAAAAACACACAAGGAAAACAGGTATATTATAATTTTGTATCAAACCACCTTGAAATGAGACACATTCATTTTTATGCACCCATACGTGCTCAATATTTTGGTTAAGACAAGAGTTTAAAATTCTATGTTTCAGGGAACCAAGGAAAGAAGGATTTAGAAACAATCCTTCTCAGTCAAATCTATCTTCAGCAGGAACGATCTTAGCCAATTCCATGGCGAAGTTATCGGTTGAGAGAAATGTAGTTCATCAACATCAGGAAAGACCTTCGTTTGGTAATTTAAGAAAAGCAACTGATCAAACAAAATCACATTTGTTCATTGATGATCATAATAATAGACTGCCATTTCAACATCAACACATGGTGGATAATACAATAAAAAACAATTACTATAGCCAACCTCAAACGAAAGCCAATCCTCCAGCAATCTTCAATATACATCCTAGCATTTACAGGAATAATCATGCTGCTGCTTCTGTTAACAAGGTTCTTGATAATACAAACCACATATCATGGGATTATGATCATCATTCTAGACTACCAATGGATCGAATGAATCTTTATCCTAAAGTGAATCACAGTGCACAAGAAGGCTACAAGCAACAACAGTGCCGTTATTATGCTGTAGGGAAATGTTACTATAGAGAGAACTGTAAATTCTCACATGACATGACCGAAGATTTTGTACAAAGAGAGAGAGAAAGATTGGGTCATCGTTATCATATGCATCAAAATGCTCGTCATTGTCGGTAACTATATGTATAACCTTTTGGGGAGTAAGGATTATCCTCATAGAATTGTCTTTTGTATTTGAATAGTAGCGTGTTGTGTGCTACTTAGATATGTTTTACATTTTTGAATGAGTAAATCTTCCCATTTTCTTGATTTTAATCGGGTAGCTCATTTTGAATGAGTAAATGATTTTAAAGCAGTGTCTGAGTTACACACCAATAAAAATGTTGTTCTAGATTACTTGTTGTAAGGTGTAATATACCTCG

Coding sequence (CDS)

ATGGGTGATATTGTTATGTTTGAACAAAAAGTATATGAGATGTACAACATCGCATCTAGGAGCTCCACAGGTCCTTCATGTGGAACAAGAACGGTTGCTGGTCGCATTGTTAAAGAAAGCTATGGTTCTTCCAAACAGCAACATACATTTACGATTGAAGTATTGTGGAGTAAGGGTGAGAAACCCCTTCCTCCACTTCATCCCCTTTTAATCAAAGGTCGAAACCTTTACCGGATGAAGACTATGAGACAGCCTTGGGAAGATGAAGATGAAAGGCAGAAAGTTCTAATGGAAAAACATGCCAGGGGATCACTTGCAAGATCAAATAGGGAAGCACGTGTAATAGAGAAAGAAAAAAGAAAAACACACAAGGAAAACAGGGAACCAAGGAAAGAAGGATTTAGAAACAATCCTTCTCAGTCAAATCTATCTTCAGCAGGAACGATCTTAGCCAATTCCATGGCGAAGTTATCGGTTGAGAGAAATGTAGTTCATCAACATCAGGAAAGACCTTCGTTTGGTAATTTAAGAAAAGCAACTGATCAAACAAAATCACATTTGTTCATTGATGATCATAATAATAGACTGCCATTTCAACATCAACACATGGTGGATAATACAATAAAAAACAATTACTATAGCCAACCTCAAACGAAAGCCAATCCTCCAGCAATCTTCAATATACATCCTAGCATTTACAGGAATAATCATGCTGCTGCTTCTGTTAACAAGGTTCTTGATAATACAAACCACATATCATGGGATTATGATCATCATTCTAGACTACCAATGGATCGAATGAATCTTTATCCTAAAGTGAATCACAGTGCACAAGAAGGCTACAAGCAACAACAGTGCCGTTATTATGCTGTAGGGAAATGTTACTATAGAGAGAACTGTAAATTCTCACATGACATGACCGAAGATTTTGTACAAAGAGAGAGAGAAAGATTGGGTCATCGTTATCATATGCATCAAAATGCTCGTCATTGTCGGTAA

Protein sequence

MGDIVMFEQKVYEMYNIASRSSTGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNREARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQHQERPSFGNLRKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPSIYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAVGKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR

Homology

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BLAST of Cucsat.G3673 vs. ExPASy Swiss-Prot
Match: Q338N2 (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 63/156 (40.38%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IE+LWS+G KP PPLHPLLIKGRNLY+ KTMRQPW DE+ER + L EKHARG +AR  RE
Sbjct: 242 IEILWSRGYKPWPPLHPLLIKGRNLYKDKTMRQPWLDEEERNRALQEKHARGYVARKTRE 301

Query: 100 ARVIEKEKRK-----THKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQ 159
            R+ +KE  +      +KEN+   ++      SQ+ +    T+  N++ K + +     Q
Sbjct: 302 VRIKDKENERMRRLNRNKENKSKGQDNMNKKSSQA-VFPQHTVTTNTVQKRAEKIIPSLQ 361

Query: 160 HQERPSFGNLRKATDQTKSHLFIDDHNNRLPFQHQH 191
           H E  +      ++ QT +   +  +  + P   QH
Sbjct: 362 HGESGNSSQQHLSSKQTPTEQLL-HYLPQFPHPQQH 395

[Close]

BLAST of Cucsat.G3673 vs. NCBI nr
Match: XP_031744267.1 (zinc finger CCCH domain-containing protein 62 isoform X2 [Cucumis sativus])

HSP 1 Score: 572 bits (1474), Expect = 8.19e-202
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE
Sbjct: 217 IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 276

Query: 100 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQHQERP 159
           ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQHQERP
Sbjct: 277 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQHQERP 336

Query: 160 SFGNLRKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPS 219
           SFGNLRKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPS
Sbjct: 337 SFGNLRKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPS 396

Query: 220 IYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAV 279
           IYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAV
Sbjct: 397 IYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAV 456

Query: 280 GKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR 320
           GKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR
Sbjct: 457 GKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR 497

[Close]

BLAST of Cucsat.G3673 vs. NCBI nr
Match: XP_004141817.1 (zinc finger CCCH domain-containing protein 62 isoform X1 [Cucumis sativus] >KGN45466.1 hypothetical protein Csa_016559 [Cucumis sativus])

HSP 1 Score: 572 bits (1474), Expect = 8.48e-202
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE
Sbjct: 218 IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 277

Query: 100 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQHQERP 159
           ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQHQERP
Sbjct: 278 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQHQERP 337

Query: 160 SFGNLRKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPS 219
           SFGNLRKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPS
Sbjct: 338 SFGNLRKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPS 397

Query: 220 IYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAV 279
           IYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAV
Sbjct: 398 IYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAV 457

Query: 280 GKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR 320
           GKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR
Sbjct: 458 GKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR 498

[Close]

BLAST of Cucsat.G3673 vs. NCBI nr
Match: XP_008462271.1 (PREDICTED: zinc finger CCCH domain-containing protein 62-like [Cucumis melo] >KAA0059379.1 zinc finger CCCH domain-containing protein 62-like [Cucumis melo var. makuwa] >TYK03947.1 zinc finger CCCH domain-containing protein 62-like [Cucumis melo var. makuwa])

HSP 1 Score: 468 bits (1203), Expect = 1.24e-160
Identity = 242/292 (82.88%), Postives = 256/292 (87.67%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQ WEDE ERQKVL EKHARGSLARSNRE
Sbjct: 217 IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQTWEDERERQKVLKEKHARGSLARSNRE 276

Query: 100 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQER 159
           ARVIEKEKRKTHKENRE RKEG+RNNPS+SNLSSAGT+LA SMAKL+V+ RNVVHQHQER
Sbjct: 277 ARVIEKEKRKTHKENRESRKEGYRNNPSRSNLSSAGTMLAESMAKLTVDSRNVVHQHQER 336

Query: 160 PSFGNLRKATDQTKSHLFIDDH----------NNRLPFQHQHMVDNTIKNNYYSQPQTKA 219
           PSFGNL KATDQTKSH+FID +          +NRLPFQHQHMVDNT++NNYYSQPQTKA
Sbjct: 337 PSFGNLGKATDQTKSHMFIDQNRLPSQHQHMMDNRLPFQHQHMVDNTMQNNYYSQPQTKA 396

Query: 220 NPPAIFNIHPSIYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEG 279
           NPPA FNI PSIYR N AA+SVNKVLDN NHI          PMDRMNLYPKVNHSAQEG
Sbjct: 397 NPPASFNIQPSIYRTNPAASSVNKVLDNRNHI----------PMDRMNLYPKVNHSAQEG 456

Query: 280 YKQQQCRYYAVGKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR 320
           Y Q QCRY+AVGKCYYRE+CKFSHDMTEDFVQRE+ERLGH YHMHQNARHCR
Sbjct: 457 YNQPQCRYFAVGKCYYRESCKFSHDMTEDFVQREKERLGHYYHMHQNARHCR 498

[Close]

BLAST of Cucsat.G3673 vs. NCBI nr
Match: XP_038899462.1 (zinc finger CCCH domain-containing protein 62-like [Benincasa hispida])

HSP 1 Score: 390 bits (1001), Expect = 4.52e-130
Identity = 213/292 (72.95%), Postives = 238/292 (81.51%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLWSKGEKPLPPLHPLLIKGRNLYR+KT RQ WEDE ERQKVLMEKHARGSLARSNRE
Sbjct: 217 IEVLWSKGEKPLPPLHPLLIKGRNLYRIKTFRQTWEDEGERQKVLMEKHARGSLARSNRE 276

Query: 100 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQER 159
            RV+E+EKRKTHKENR+ R EGF++NPSQSNLSSAGT L  SM KLSV+ R VVHQHQE 
Sbjct: 277 TRVVEREKRKTHKENRKSRNEGFKDNPSQSNLSSAGTTLVQSMEKLSVDSRKVVHQHQEE 336

Query: 160 PSFGNLRKA---------TDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKAN 219
             FGN  KA         ++QTKS LFID  +NRLPFQHQ        NNYYSQPQ KAN
Sbjct: 337 QLFGNSGKAFQHQQPENPSNQTKSDLFID--HNRLPFQHQ--------NNYYSQPQMKAN 396

Query: 220 PPAIFNI-HPSIYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEG 279
             A ++I  P IY+ +HAA SVN+VLDNTN  SWDY H+SRLPM RMNLYP+VN +AQEG
Sbjct: 397 HSACYSIMQPIIYKADHAA-SVNEVLDNTNRSSWDY-HYSRLPMGRMNLYPRVNQTAQEG 456

Query: 280 YKQQQCRYYAVGKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR 320
           YKQQQCR+YAVG+CYY ENCKFSH+MT DFV+RE+ERLGH +H+HQNARHCR
Sbjct: 457 YKQQQCRHYAVGRCYYGENCKFSHEMTRDFVRREKERLGH-HHIHQNARHCR 495

[Close]

BLAST of Cucsat.G3673 vs. NCBI nr
Match: KAG7013969.1 (Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347 bits (889), Expect = 2.23e-113
Identity = 193/295 (65.42%), Postives = 219/295 (74.24%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQ WEDE ERQKVLMEKHARGSLARS RE
Sbjct: 207 IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTRE 266

Query: 100 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQER 159
           ARV+EKEKRKTH ENR+ R+EGF  NPSQSNLSSAGT+LA +M KLSV+ R  VH HQER
Sbjct: 267 ARVVEKEKRKTHNENRKSRREGFSENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQER 326

Query: 160 PSFGNL------RKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPA 219
           P FGN          T QTKS +FID  ++R P+Q Q MV N ++NNY+SQPQ K +PP 
Sbjct: 327 PLFGNSGEPPRQHNPTKQTKSDVFID--HSRRPYQLQPMV-NPVQNNYFSQPQMKPDPPP 386

Query: 220 I-FNIHPSIYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQ 279
           + +N+HPSIYR +H A                    SRL M +MNLYPKVN  AQE YKQ
Sbjct: 387 VSYNVHPSIYRADHPA--------------------SRLAMGQMNLYPKVNQHAQESYKQ 446

Query: 280 QQCRYYAVGKCYYRENCKFSHDMTEDFVQRERERLGHRYH------MHQNARHCR 320
           Q+CRYYAVG+C+Y ENCKFSH+MT+DF  RE+ERLG  +H      MHQNAR CR
Sbjct: 447 QRCRYYAVGRCHYGENCKFSHEMTQDFAGREKERLGRHHHHHHHHQMHQNARLCR 478

[Close]

BLAST of Cucsat.G3673 vs. ExPASy TrEMBL
Match: A0A0A0KCF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448770 PE=4 SV=1)

HSP 1 Score: 572 bits (1474), Expect = 4.11e-202
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE
Sbjct: 218 IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 277

Query: 100 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQHQERP 159
           ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQHQERP
Sbjct: 278 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVERNVVHQHQERP 337

Query: 160 SFGNLRKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPS 219
           SFGNLRKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPS
Sbjct: 338 SFGNLRKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPS 397

Query: 220 IYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAV 279
           IYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAV
Sbjct: 398 IYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAV 457

Query: 280 GKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR 320
           GKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR
Sbjct: 458 GKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR 498

[Close]

BLAST of Cucsat.G3673 vs. ExPASy TrEMBL
Match: A0A5A7V0Q9 (Zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001440 PE=4 SV=1)

HSP 1 Score: 468 bits (1203), Expect = 6.01e-161
Identity = 242/292 (82.88%), Postives = 256/292 (87.67%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQ WEDE ERQKVL EKHARGSLARSNRE
Sbjct: 217 IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQTWEDERERQKVLKEKHARGSLARSNRE 276

Query: 100 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQER 159
           ARVIEKEKRKTHKENRE RKEG+RNNPS+SNLSSAGT+LA SMAKL+V+ RNVVHQHQER
Sbjct: 277 ARVIEKEKRKTHKENRESRKEGYRNNPSRSNLSSAGTMLAESMAKLTVDSRNVVHQHQER 336

Query: 160 PSFGNLRKATDQTKSHLFIDDH----------NNRLPFQHQHMVDNTIKNNYYSQPQTKA 219
           PSFGNL KATDQTKSH+FID +          +NRLPFQHQHMVDNT++NNYYSQPQTKA
Sbjct: 337 PSFGNLGKATDQTKSHMFIDQNRLPSQHQHMMDNRLPFQHQHMVDNTMQNNYYSQPQTKA 396

Query: 220 NPPAIFNIHPSIYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEG 279
           NPPA FNI PSIYR N AA+SVNKVLDN NHI          PMDRMNLYPKVNHSAQEG
Sbjct: 397 NPPASFNIQPSIYRTNPAASSVNKVLDNRNHI----------PMDRMNLYPKVNHSAQEG 456

Query: 280 YKQQQCRYYAVGKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR 320
           Y Q QCRY+AVGKCYYRE+CKFSHDMTEDFVQRE+ERLGH YHMHQNARHCR
Sbjct: 457 YNQPQCRYFAVGKCYYRESCKFSHDMTEDFVQREKERLGHYYHMHQNARHCR 498

[Close]

BLAST of Cucsat.G3673 vs. ExPASy TrEMBL
Match: A0A1S3CH36 (zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LOC103500669 PE=4 SV=1)

HSP 1 Score: 468 bits (1203), Expect = 6.01e-161
Identity = 242/292 (82.88%), Postives = 256/292 (87.67%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQ WEDE ERQKVL EKHARGSLARSNRE
Sbjct: 217 IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQTWEDERERQKVLKEKHARGSLARSNRE 276

Query: 100 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQER 159
           ARVIEKEKRKTHKENRE RKEG+RNNPS+SNLSSAGT+LA SMAKL+V+ RNVVHQHQER
Sbjct: 277 ARVIEKEKRKTHKENRESRKEGYRNNPSRSNLSSAGTMLAESMAKLTVDSRNVVHQHQER 336

Query: 160 PSFGNLRKATDQTKSHLFIDDH----------NNRLPFQHQHMVDNTIKNNYYSQPQTKA 219
           PSFGNL KATDQTKSH+FID +          +NRLPFQHQHMVDNT++NNYYSQPQTKA
Sbjct: 337 PSFGNLGKATDQTKSHMFIDQNRLPSQHQHMMDNRLPFQHQHMVDNTMQNNYYSQPQTKA 396

Query: 220 NPPAIFNIHPSIYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEG 279
           NPPA FNI PSIYR N AA+SVNKVLDN NHI          PMDRMNLYPKVNHSAQEG
Sbjct: 397 NPPASFNIQPSIYRTNPAASSVNKVLDNRNHI----------PMDRMNLYPKVNHSAQEG 456

Query: 280 YKQQQCRYYAVGKCYYRENCKFSHDMTEDFVQRERERLGHRYHMHQNARHCR 320
           Y Q QCRY+AVGKCYYRE+CKFSHDMTEDFVQRE+ERLGH YHMHQNARHCR
Sbjct: 457 YNQPQCRYFAVGKCYYRESCKFSHDMTEDFVQREKERLGHYYHMHQNARHCR 498

[Close]

BLAST of Cucsat.G3673 vs. ExPASy TrEMBL
Match: A0A6J1GQF0 (zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662 GN=LOC111456567 PE=4 SV=1)

HSP 1 Score: 346 bits (888), Expect = 1.96e-113
Identity = 193/293 (65.87%), Postives = 220/293 (75.09%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQ WEDE ERQKVLMEKHARGSLARS RE
Sbjct: 217 IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTRE 276

Query: 100 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQER 159
           ARV+EKEKRKTH ENR+ R+EGF  NPSQSNLSSAGT+LA +M KLSV+ R  VH HQER
Sbjct: 277 ARVVEKEKRKTHNENRKSRREGFSENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQER 336

Query: 160 PSFGNL------RKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPA 219
           P FGN          T QTKS +FID  ++R P+Q Q M+ N ++NNY+SQPQ KA+PP 
Sbjct: 337 PLFGNSGEPPRQHNPTKQTKSDVFID--HSRRPYQLQPMM-NPVQNNYFSQPQMKADPPP 396

Query: 220 I-FNIHPSIYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQ 279
           + +NIHPSIYR ++ A                    SRL M +MNLYPKVN  AQE YKQ
Sbjct: 397 VSYNIHPSIYRADYPA--------------------SRLAMGQMNLYPKVNQHAQESYKQ 456

Query: 280 QQCRYYAVGKCYYRENCKFSHDMTEDFVQRERERLGHRYH----MHQNARHCR 320
           Q+CRYYAVG+C+Y ENCKFSH+MT+DF  RE+ERLG  +H    MHQNAR CR
Sbjct: 457 QRCRYYAVGRCHYGENCKFSHEMTQDFAGREKERLGRHHHHHHQMHQNARLCR 486

[Close]

BLAST of Cucsat.G3673 vs. ExPASy TrEMBL
Match: A0A6J1JT10 (zinc finger CCCH domain-containing protein 62-like OS=Cucurbita maxima OX=3661 GN=LOC111488621 PE=4 SV=1)

HSP 1 Score: 340 bits (873), Expect = 3.27e-111
Identity = 189/292 (64.73%), Postives = 218/292 (74.66%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLWSKGEKPLPPLHPLLIKGRNLYRMKT+RQ WEDE ERQKVLMEKHARGSLARS RE
Sbjct: 215 IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTLRQTWEDEGERQKVLMEKHARGSLARSTRE 274

Query: 100 ARVIEKEKRKTHKENREPRKEGFRNNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQER 159
           ARV+EKEKRKTH ENR+ R+EGF  NPS+SNLSSAGT+LA +M KLSV+ R  VH HQE+
Sbjct: 275 ARVVEKEKRKTHNENRKSRREGFNENPSKSNLSSAGTMLAETMVKLSVDARKAVHPHQEK 334

Query: 160 PSFGNL-----RKATDQTKSHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAI 219
           P FG+         T QTKS +FID  ++R P+Q Q MV N ++NNY+SQPQ KA+PP +
Sbjct: 335 PLFGHSGEPRQHNPTKQTKSDVFID--HSRRPYQLQPMV-NPVQNNYFSQPQMKADPPPV 394

Query: 220 -FNIHPSIYRNNHAAASVNKVLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQ 279
            +NIHPSIY  +H A                    SRL M +MNLYPKVN  AQE YKQQ
Sbjct: 395 SYNIHPSIYSADHPA--------------------SRLAMGQMNLYPKVNQHAQESYKQQ 454

Query: 280 QCRYYAVGKCYYRENCKFSHDMTEDFVQRERERLGHRYH----MHQNARHCR 320
           +CRYYAVG+C+Y ENCKFSH+M +DF  RE+ERLG  +H    MHQNAR CR
Sbjct: 455 RCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMHQNARLCR 483

[Close]

BLAST of Cucsat.G3673 vs. TAIR 10
Match: AT5G66840.1 (SAP domain-containing protein )

HSP 1 Score: 80.1 bits (196), Expect = 3.6e-15
Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 40  IEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNRE 99
           IEVLW +G + LPPL+PLL+KGRNLYR+ T+RQ W +E++R KVL EKH RG+ AR    
Sbjct: 199 IEVLWCEGTQKLPPLYPLLVKGRNLYRLMTLRQRWPNEEDRVKVLNEKHNRGAAARKVMR 258

Query: 100 ARVIE 105
            R I+
Sbjct: 259 ERKIK 263

The following BLAST results are available for this feature:

BLAST of Cucsat.G3673 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q338N2	1.6e-20	40.38	Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Cucsat.G3673 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744267.1	8.19e-202	100.00	zinc finger CCCH domain-containing protein 62 isoform X2 [Cucumis sativus]	[more]
XP_004141817.1	8.48e-202	100.00	zinc finger CCCH domain-containing protein 62 isoform X1 [Cucumis sativus] >KGN4...	[more]
XP_008462271.1	1.24e-160	82.88	PREDICTED: zinc finger CCCH domain-containing protein 62-like [Cucumis melo] >KA...	[more]
XP_038899462.1	4.52e-130	72.95	zinc finger CCCH domain-containing protein 62-like [Benincasa hispida]	[more]
KAG7013969.1	2.23e-113	65.42	Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma s...	[more]

BLAST of Cucsat.G3673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCF3	4.11e-202	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448770 PE=4 SV=1	[more]
A0A5A7V0Q9	6.01e-161	82.88	Zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CH36	6.01e-161	82.88	zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1GQF0	1.96e-113	65.87	zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JT10	3.27e-111	64.73	zinc finger CCCH domain-containing protein 62-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Cucsat.G3673 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66840.1	3.6e-15	58.46	SAP domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 271..291
None	No IPR available	GENE3D	2.30.30.1190		coord: 406..481 e-value: 4.4E-6 score: 28.7
None	No IPR available	PIRSR	PIRSR003033-1	PIRSR003033-1	coord: 86..142 e-value: 1.2E-5 score: 21.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..300
None	No IPR available	PANTHER	PTHR35323:SF4	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE	coord: 448..481
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 448..481
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 8..452
None	No IPR available	PANTHER	PTHR35323:SF4	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE	coord: 8..452
IPR003034	SAP domain	SMART	SM00513	sap_9	coord: 107..141 e-value: 3.9E-5 score: 33.1
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 107..141 e-value: 1.3E-10 score: 40.8
IPR003034	SAP domain	PROSITE	PS50800	SAP	coord: 107..141 score: 10.485491
IPR036361	SAP domain superfamily	GENE3D	1.10.720.30	SAP domain	coord: 88..151 e-value: 2.3E-7 score: 32.3
IPR036361	SAP domain superfamily	SUPERFAMILY	68906	SAP domain	coord: 104..142
IPR041367	E3 ligase, CCCH-type zinc finger	PFAM	PF18044	zf-CCCH_4	coord: 451..471 e-value: 1.7E-6 score: 27.6
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 446..473 score: 13.948072
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 446..474

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3673.T4	Cucsat.G3673.T4	mRNA
Cucsat.G3673.T2	Cucsat.G3673.T2	mRNA
Cucsat.G3673.T3	Cucsat.G3673.T3	mRNA
Cucsat.G3673.T1	Cucsat.G3673.T1	mRNA
Cucsat.G3673.T13	Cucsat.G3673.T13	mRNA
Cucsat.G3673.T7	Cucsat.G3673.T7	mRNA
Cucsat.G3673.T14	Cucsat.G3673.T14	mRNA
Cucsat.G3673.T12	Cucsat.G3673.T12	mRNA
Cucsat.G3673.T9	Cucsat.G3673.T9	mRNA
Cucsat.G3673.T11	Cucsat.G3673.T11	mRNA
Cucsat.G3673.T10	Cucsat.G3673.T10	mRNA
Cucsat.G3673.T8	Cucsat.G3673.T8	mRNA
Cucsat.G3673.T6	Cucsat.G3673.T6	mRNA
Cucsat.G3673.T5	Cucsat.G3673.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding