Cucsat.G2693 (gene) Cucumber (B10) v3

Overview
NameCucsat.G2693
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionWRKY domain-containing protein
Locationctg1006: 726919 .. 729540 (-)
RNA-Seq ExpressionCucsat.G2693
SyntenyCucsat.G2693
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACACATCTCTCTCAAACAACCGAGAAAATAGAAAAGTTTAAGAGCCAAAAGTTTGGGGGTTTTTCTTTTTCTCTTTTATTCTTCAAACATCTTAACAAAAAAAAAAAAAAAAAAAAAAACCCTAATTTTTGTTGATCATATTGTTTGATTTTCAATGTCAAATGATGAAGGGAAAAATGTGTACCAGCAGTATGATCCATTTCAATACAACCAATTGGATATGAACCGTTCAATCTTCCATCAACAAGCTGCAGCGGCGTTGGATCCTGGCTTGATGAGCTTCACTAATTTCTTCGATACCAGCTCTTTGGAATATAATAGCCTGTCGAAGGCGTTCGATGTGTCGTGCTGTTCATCTCAAGTCATTTCTGCAGTGGACGACGTGTCGAAAAAGAAGGCTTCAACGACAACCCCAAATTCTTCAGTGTCATCTTCGTCTAATGAAGCTGTAGTTGAAGAAGATTCAGTGAAGAGCAACAAATTAGAAGACATAAAAGGGCGGTGCGAGAATAAAGATGAAGAAAAGTCTAAGAAACAGTAAGTATATATGTTTATTTATTTTTATTTTTTAATGGTTTAATATTGGAGGAGCCCATGGGTGAAGATTACTAAGATATAATCACTTAAAAAGCTAGATTTAGATTGATAAATAGGGTATTACTAATTCAAAAAGATAATTATATAGATTTAATTAGAGATTATTAAAAATGTGTGTGAGAAGAAATTAAAAAGGGGTTGATGATGATGTTGATTTGATTTTGTAGGAACAGCAATTTATCAAAAAAGAAAGAGAAACGGCCGAGGGAGCCCCGTTTTGCTTTCTTGACTAAGAGTGAGATTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGTCAGAAAGCAGTTAAAAATAGTCCTTACCCCAGGTTAGTTTCTTTTTTCTTTTTCTTTTTTTCTCCCCCCTGCCCTCTTATTTAAATTACTTTTCACCATTTTCCCATTTCCATTATTGTTATTTTCTTATATACATATATTCTGAATTAGTCAGAAGGGATTTAAGGCCATTGCTTGATCTGGATATGAACCATAAGATAAATTATCCCCTTTTTTTTAGTTCCTTCCCAAACTTTTTTAGGTTAAATTCTTCCCAAGTTTTAAACTTGTGTGTGTATATATATATTTTTTCATTTATTTATATAAGTGCAACTATTTAAATTAATTTATATTTAAAAAGTTTATAATAACTTGATCAACTCCTGGTGTTTGTTGTTAATTAACTCTACTGTTACTTAACATATATAGCTTATTAAAGACGTGACATTACTAAACCAAAGTTGTAAATTCTCTTACCAAACAAAGACTTGGAGTAGTGTTTTGGATTATTCGTCTCTTATGTTTGTTCACTACTGTCAAAATGTTTTAGTACAGTACTCTTTCTTGCATCTAAAGGTTTAGAGGAGTGTGAATCTTTTTGTTTTTCTATTCCTTATCCAAGTTCTTTCCAATACTTGTTTCATGTAAGGTATATAGTCTTCTAGTTTTCTTTCATTTTTTTTCCTTGTATTTTCCTAAAAGAACAAAGTATATATAAATTCTCCAAATCAACAGCATGTCATAATTAATAATACTCAATTAACATATCACTAATAAGTTAGCCACACAAATTTAATTCCTTCGATTAAGATTGGATATTGCACTACTCTTTTGATATCATATAGATTTGTTTAACCCTAATTGCAATAGAAAACACTTTCATGGTATATAACAATATTTGTAGTAAAATTTAGTATCGATAAACTCTCTATCGCCAATAGACTTTTATTAGAGAAAAACTCCTATTAATAAGTATATGATCTATCACTCATACATTAAACTTTGAAAGCTTCATCTAGATTTTCTTATATTTATATAAGACAATTTGCATTTTACTATATATATATATATATGCTAATACTTTTGACTTATTGTAATCTTTGTTTAATGTACAATATTGTGTGTGCGTGATATAACGCAGAAGCTACTATAGATGCACCAGCCAAAAATGTGTAGTAAAAAAACGAGTTGAAAGATCATATCAAGATCCATCTGTGGTGATTACTACATATGAAGGCCAACACAACCACCATTGCCCAGCTACACTCCGAGGCCATTCTGCAGGGATCATGTCGTCTCCATTCTACGCATCAGCATCAGCATCAGTAACAGCAGCCTCATCGGGGCCTACGCTTCCCCAAGAACTCTTCTCGCATTTGTTACCAACGAATAACTGCCAAACCGACCCAGCTGCCTCGATGATGTACCAAAATTTAAGCCTTCAACAACACCTTCAATTGCCTGATCATTATGGTTTGTTGCAAGATTTATTCACTCAAAAATAGGAAATCTTTATACAAGTCCTACTTTGTATGAGAATTTTATATTGTGTATAAATTTTCCGTTTTCTTCCAGCTTTCCTGCCTCTTGTATTAGGATAAACCCTTGGAGAGTTGAGATTTTCTTAGAGTCTATATATTTTACTATATATTGTTATGTATCTAACATATAATGGAGGGGTCAGAACCTGTGTACTAAGTTTACTATATGCCATATTTTTGCATTGATTTGATGCATTTAAATATACTTGTGTAAAAGACCCT

Coding sequence (CDS)

ATGTCAAATGATGAAGGGAAAAATGTGTACCAGCAGTATGATCCATTTCAATACAACCAATTGGATATGAACCGTTCAATCTTCCATCAACAAGCTGCAGCGGCGTTGGATCCTGGCTTGATGAGCTTCACTAATTTCTTCGATACCAGCTCTTTGGAATATAATAGCCTGTCGAAGGCGTTCGATGTGTCGTGCTGTTCATCTCAAGTCATTTCTGCAGTGGACGACGTGTCGAAAAAGAAGGCTTCAACGACAACCCCAAATTCTTCAGTGTCATCTTCGTCTAATGAAGCTGTAGTTGAAGAAGATTCAGTGAAGAGCAACAAATTAGAAGACATAAAAGGGCGGTGCGAGAATAAAGATGAAGAAAAGTCTAAGAAACAGAACAGCAATTTATCAAAAAAGAAAGAGAAACGGCCGAGGGAGCCCCGTTTTGCTTTCTTGACTAAGAGTGAGATTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGTCAGAAAGCAGTTAAAAATAGTCCTTACCCCAGAAGCTACTATAGATGCACCAGCCAAAAATGTGTAGTAAAAAAACGAGTTGAAAGATCATATCAAGATCCATCTGTGGTGATTACTACATATGAAGGCCAACACAACCACCATTGCCCAGCTACACTCCGAGGCCATTCTGCAGGGATCATGTCGTCTCCATTCTACGCATCAGCATCAGCATCAGTAACAGCAGCCTCATCGGGGCCTACGCTTCCCCAAGAACTCTTCTCGCATTTGTTACCAACGAATAACTGCCAAACCGACCCAGCTGCCTCGATGATGTACCAAAATTTAAGCCTTCAACAACACCTTCAATTGCCTGATCATTATGGTTTGTTGCAAGATTTATTCACTCAAAAATAG

Protein sequence

MSNDEGKNVYQQYDPFQYNQLDMNRSIFHQQAAAALDPGLMSFTNFFDTSSLEYNSLSKAFDVSCCSSQVISAVDDVSKKKASTTTPNSSVSSSSNEAVVEEDSVKSNKLEDIKGRCENKDEEKSKKQNSNLSKKKEKRPREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCVVKKRVERSYQDPSVVITTYEGQHNHHCPATLRGHSAGIMSSPFYASASASVTAASSGPTLPQELFSHLLPTNNCQTDPAASMMYQNLSLQQHLQLPDHYGLLQDLFTQK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q93WV41.2e-4159.65WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1[more]
Q8VWJ24.2e-3950.99WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1[more]
Q9FGZ43.3e-3643.38Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 ... [more]
O229009.0e-3448.65WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1[more]
Q9FL261.2e-3341.83WRKY transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=WRKY8 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_004139887.13.14e-20399.66WRKY transcription factor 71 [Cucumis sativus] >KGN44260.1 hypothetical protein ... [more]
XP_008447132.15.57e-19797.65PREDICTED: probable WRKY transcription factor 71 isoform X1 [Cucumis melo][more]
XP_038888266.11.53e-17490.91WRKY transcription factor 71-like [Benincasa hispida][more]
KAA0056516.14.69e-15682.20putative WRKY transcription factor 71 isoform X1 [Cucumis melo var. makuwa] >TYK... [more]
AZU90762.19.97e-15681.21WRKY transcription factor 2 [Siraitia grosvenorii] >QEE82238.1 WRKY transcriptio... [more]
Match NameE-valueIdentityDescription
A0A0A0K3H81.52e-20399.66WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G236280 PE=4 S... [more]
A0A1S3BHB32.70e-19797.65probable WRKY transcription factor 71 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A5D3CNS12.27e-15682.20Putative WRKY transcription factor 71 isoform X1 OS=Cucumis melo var. makuwa OX=... [more]
A0A3Q9QZR94.83e-15681.21WRKY transcription factor 2 OS=Siraitia grosvenorii OX=190515 GN=WRKY2 PE=2 SV=1[more]
A0A6J1D4043.21e-15581.35probable WRKY transcription factor 71 OS=Momordica charantia OX=3673 GN=LOC11101... [more]
Match NameE-valueIdentityDescription
AT1G29860.18.3e-4359.65WRKY DNA-binding protein 71 [more]
AT4G18170.13.0e-4050.99WRKY DNA-binding protein 28 [more]
AT5G49520.12.4e-3743.38WRKY DNA-binding protein 48 [more]
AT2G47260.16.4e-3548.65WRKY DNA-binding protein 23 [more]
AT5G46350.18.4e-3541.83WRKY DNA-binding protein 8 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 156..214
e-value: 4.3E-33
score: 125.9
IPR003657WRKY domainPFAMPF03106WRKYcoord: 157..212
e-value: 7.3E-22
score: 77.4
IPR003657WRKY domainPROSITEPS50811WRKYcoord: 151..215
score: 28.827847
IPR036576WRKY domain superfamilyGENE3D2.20.25.80WRKY domaincoord: 141..216
e-value: 2.4E-30
score: 106.1
IPR036576WRKY domain superfamilySUPERFAMILY118290WRKY DNA-binding domaincoord: 149..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..144
NoneNo IPR availablePANTHERPTHR31221:SF211WRKY TRANSCRIPTION FACTOR 71-RELATEDcoord: 16..216
IPR044810WRKY transcription factor, plantPANTHERPTHR31221WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATEDcoord: 16..216

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G2693.T1Cucsat.G2693.T1mRNA
Cucsat.G2693.T2Cucsat.G2693.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding