Cucsat.G21255 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACGTGAAGATTAAAACTGTGAAAACACACTTTATTCCCAACTAAAAAGGTAAATTTCCCAAATATGATTAGAAAAAAAACTAGAAATCGTCTAGCAAAGTGGAAGGGTCGAGGGGGTTATTTGGTCATCGAATTCCGCCGTGTTAACGGAGATTGTCTATTTCCTGATTCCCAAGCGACCGCGGTATACTTCCGATTTGATATAAATACAATCCCTTGCCTCTACTCCCTTAACAAGAAATTCCCAGAAGATCGTCATACATACCCTTCAAACTTCTCTCTAAATTTCCGTCAGCATTTTCTGAATCCCAACGTCGACTGGAAGTATAGTTGTTTGTTCATCAAATCTCTCTCTAAATAACGATCAATCTCCTCTTCCTTATACAAATTCACGTTACAACTCCTGCCGACACCAATATGATGCTCAGAATTCGCAGTAGAGATGGTCTGGAGCGAGTCGCTGTAGAAAACCCACACATCACAATCGCTCAACTCAAAGCCATAATCCAATCCCAGCTCAAAATCCCAATCCACAACCAAACCCTCTCCACTAACCAAAATATTCTATTGGCTAAGACTCAGGATGATCTTTCCAAATTCACTGACATGTCTAATCCTAATACCTACCTCTCCTCGCTTAATTTGTCCCATGGGTCTATTGTCTTTCTCGCCTACGAGGGCGAGCGCACTGTTGCTGGGCCTACTGTCCATCCCGCCGGATCTTTTGGCCGTAAAATGACTATGGATGATCTAATTGCTAAGCAGATGCGGATCACTCGTCAAGAAAACCCGCACTGTGAATTGGTTTCTTTCGACCGGGATTGCGCCAATGCTTTCCAGCATTATGTTAATGAAACGCTAGCCTTCGCCGTCAAACGTGGGGGGATGATGTACGGAACCGTATCACCAGAAGGCAAGGTCGAGGTAGATTTCATATATGAGCCGCCACAGCAAGGGACTGAGGATAATTTACTGTTTTTCCGAGATCACGATGAGGAAAGATTGGTGGAAGCAATCGCAGTTGGGTTGGGAATGAGGAAAGTTGGGTTTATATTCACGCAGACGATAAGTCAGGACAAAAAAGACTACACCTTATCCAACAGGGAAGTACTCCAGGCGGCTCAGTTTCACTCTGAGAGCGAGTTGAAGGAGTGGGTGACAGCAGTTGTGAAGTTGGAGGTGAACGAGGATGGGGGTGCTGATGTTCATTTTGAGGCTTTTCAAATGAGTGACATGTGTATTAGATTGTTTAAGGAATGTTGGTTTGAGACGGATATTGGAGAGGATTTTGATCCCAAGCTCTCCAAGATGAAGAAGGACGTTGTTGTTGGTGTCAAAGACACTAGAGATGTTGACAATGATTTTTTCCTGGTCGTCGTCAAGATCCTCGACCATCAGGTTCGTGGACCCTTTATTTTTAATAATCGTATTCCCTCATTCCTCTGCTGTGTCGAACTGTGTGTGTTTTCTCTTCAAATAATGACTCATAATTGCATTCATTGAAATTGTTTCCACTGAATTCTCAGATTTTTGTAAATATTCTTTGTATGTTGCTTCTTTTACACATTTGACTTACCGGGATATCATGATTGAAAGTGAATTGTCAACTTGCTTTGTGAACTGAATGTGTTAGCTATTGGCCGGAGCGTAGGAGTTGGAGGTTTAGGGGGTGGTGTATTTTCCATCTTCTTAGGGCCAGAATATTAGGTAATAATTTTTGGAAATATCAATTTGGTAATTCGTTCATTGCATATTTGCTATTTATTCTACCATAACAGGTTTAACAGATAACTCGGATCAAGTAAGATATAACTGTTGCTTCTATTTTCTCTCTAAGTTCTTCGTTCTTGGGAACCATGGGCCAAGTTGGACCTTCAATGTTGTTTCCAGCTCAAGTTACCAAGGCCTAGACTCCATTCTACTCTTTCGTCCACATCTAGATTGGGGAAGAATGAGAATTGCCTTTTTAAAATTCACTAGTTGCTGCCTACCTCTCCTTTTTCTTTTCAATTCTAGCCCCCTCTTGAAACTGAATTCCTGAGCTCCATAATGATGGTATTTACAATGGGAAAAAGCTTCGTAATTCCTTCTAGTATAACATTTTATCTCTTGGGATCTATTATGTTTTTCTGGCTTCTTTTTCATACAAGAATTAACTGTACTTTTATGCTTTATGTTTCTTCACCTTTTTTATCCTCTTAGGAGCTGCTTGACTGTGTATGTTCAAAAAGTTCATACAGCATCCTTGTTTACTAAGTAAATTTTGTTGCATTAATCGTTCCCAAATGATGTTCTTATTACCGATGGGGCTAAGGTGTTGTTTACAAGTTATTATATCAGTCTTGTCTCTCAATGTCCATATCGTTAAATAATGCATTGGCTAACCAATCATTTCATGTCGAGCTCCTTAATCTCTATAGGGAAAATAAAACGTCACATGATGGTGAAAATATGGAAACTTTGGCCATCCCTTCAGTAGAGGGGAAAGCTATGTTAACCTCATGGATGAGGGTCTTGCTAAATACATCAAAGAGGCTGTTATATCTCTTCTCCCATTCATTCCATCTCAATAATGATGATTATAGGGCTTATTTCTTCAACTCTTAATAGGCCTTTTTTGTTATACGCTTGTTATGAAAATCATTATTGGTTTCCTATTAAGCCCAAAGATATTTTGTGGACTGAAGTTCCAAAAGGACTTGAAGCTCTAAGAAGACGAAGTTTTGTTTTCTCAAGATTTTCTTTTTCCTGTTTCTGGCATGGTGTTCTGTGCTTCTTGGCATTCAATGTTCCATCCGTTCCCCCCTTCTATGACGTACGAAATAATTTATTCCAGTTTCTTGTCAGTTCAGTTCTCTGTTCTCAAACTTACCTTCCCTGGGGCTTCATATCCATAGACATATACCAGTGTTGCTGGTAACAGCTTCCATTAGCTTTTCTTTTCTTTCCTTCCATATTTGCGGCTACTAAAAAGTTTCCTCTTAATGACCGATGATCCCACTTTGAGGATCCAACCTTTGATATGCCAGATCTTTAGCTCATTTACCTGCTGTCTTTGAATGCAGGCGGATTACAAGTCATTCTCCCCTCACTCACAAACCAAATTTTCTGTGCTGATATTTTTTGCTGGCCTTTATACTTTCCAATTTCTTTTCTACCCACACTGTGAACAAACTCAACCTTGGGCCACTTAGTGATCTTCCTTCTTTTCTTGCTGTCGGTGCACCATCCTGATTATCAACCTTCCTGGTATCGTCTTTCTTGCCATATGACACACTTGATTTTGTTATGGAGCTCTACCTCTTTGTCTTTGCCAACCTAATCTCTCTCCCTCTCTCTTTTTAATTGTTTATTCTTCACTTTTATTTCTCCAAAATTTTTCACTATTGACACAGATTGAAATATCAAATACATTTACTCCAATTGATTCTTCAGTTGATCCATTTCTTTCGATAAATCTTCAATATCACTTAACGTAAATTAACCTCTAACTCTATATCTGACTCCATGACCAGAAATGAATTACACTATATCAATTGATTGAATCCAAATATGCTAAAAAAAAATATAAAAGGTGACAAAATTGTAAGATAACCAAGTAATTCAAGGTACTTGGACCTCCTTCATTTAATCACACTCACTTAAAGCTTAGCCGACTTAATTTGTCCATGCTCTCATCTTTTCTAATCCCCTCTATTTATAACACACTCTACTATCTTTCTCACAATTATCAATATACTCTCTTGACCTCTCGTTCTCTTGGTGGATTGGGAGCGCAACCTTGAAGGAAAAGGAAAAACTCTGTTTTTCTCAAATGGTAGCACTTCTAGAAAGAAAATTAGCAGCTCTTTGGGAAAGGGCGGTTAAGAGGAAATATGGCGTTGATTCTTCAAAAGACATGAAAAACAAGACAAATTTGAGAGGTTTTTATTTGTTTAGTCCTTAGAAGGTGATAGCTAAAAACTCAGATTTCTTTTGGAAAAACATTAGTTTTAAACTAGGTGATAATGACCATGTTTTAGGAAGACAGGCTTGTTAATCAGGCACCTTACAAAAGTTGGTTCCAATTTGCAACAATATAATTTAGGCTAAGATCTGTATGGGGCTGTTGGTGTTTACACCAAAAGGCATGTTAAAAATAGATTAATCAAGGATGTCTATTTGTCCATGGAAGAAGTGATTGATTCTTAGATTTAGGGAGGTGCCCGTTTTTGTTCATTTTTTCTGTATGAAAGTTCTTGTAAGAAAAGTACTTAAAAAGGTTAGATTCTTCCTTTGGACGGTTACTCCCGGCATTAATACTTACGGTAAGGTGCGAAGATAACTTCACCTTAACATTTTTCTTGTAATCCTATTACTTGTGCCAACTGCAGGAGTGAGGGATCACTTCCTCACTTTTTACTTCACTGCAGCTTTGGCAAAAAAGTCTGCAACTACTTTGGTAACTTATTTGGTCTAATATGGTGTTACCCTCTAGTGTTAGATCAAGGGCTGGTGGAGTTTTACTGTTGTGGTTAACAAAGTAATGTAATATGTTTTGGTTCCTTTACTTAATGTACTCTGTTTCTACAGTTTATTTTTCGTTCCAACTTTTGTTCTTTTATTTAGGAGGCTTATTTGTTTGGAGCGTTTGCAAAAATAGCAAAAAAAATTATGATAATATGGTCCATATCACTACATTTTCTAAATTACTTGTTATATTTGTCATATTTGCAATATGCAAAAATGAGGTACTATGAGCTGTTTTTTCTAAAAAAAAATTGTCATTTGATGCAATTTTCCTATTGTTTTCATTGGAGGCTCACCAGCCACCTTCTTTGTAGAACCAGAAGCCCTTCTTCCTCTTGGAAGGATCATTAAGTAAATTTATCTTCTGTGTTTAGAACACAAGGGCTGTTTTGTGGCTAATGTAGAAGGAAAGAAATGTTAGAATTCGTAGACACGTACAATTTCTTTAATTATTTTTGACTTTGTACAGTTCACGGCTTCCAATTGGAGTAGCTGAACACAATTTCCTTTTTTTTTGTAATTGAAGGCTCTTATGAATTTTAATGCTTCTCTTTGGATGTTGTTGACGGTCCCTTTTTTCATTATATGCTAGGTCTAGGACATATTGGACATATTTTATTAGATTGGAGTCCTTTTCTCTAGGGTATTCCCTTTTTGTGGGCTGGCTCTTTTTTTTCTCATTGTTTTATGCCCTTATATTCTTTCGATTTTTTCATTGAAATTTGGTCTTAAGAACGAAAAAAAAACAGTTGTTTTTTAATTACTCCACCGGTTCACCCTGCTCATTAATTTTCTTTTTCTTAAGAAATAAAAAATAAAAAACTGTTATACCCTAATTCTATTCTGGTAGCACCCCTCGCATGTAGCTGCTAGTGTATTGGTTTGATCTTTCATTTTTCTTTCGGTGTGTGTGCCAAATATCCTGCTATGTGTTTGAGCGTTTAAATGTGATTATGAAGTTGGATGTGAATCGGCCAACAATTGTAACATTTCTAGTAGATGTGGAGGGTAATTTGATGCGAGAATTGGCCCAAATTTAAACATACAATTGTGCTTGATGAATAATATGAAAATAGGAAAAAAGAACTGCAGACAAGTCAAGTATTCTTCATTTTTCTAACTTGATACTTCAAATATAAAAAAGGTAGAAAATTTTAAATTTGGCCGCTTCTAACTGATGTTGATGACAACTTTGTACTGCAGGGTCCACTTTCGACAACATTTCCTATTGAAAACCGAAATGTTCCAGTGACCATGAAGGCATTGAAGAATCACCTAGACCGTTCAAAAGGGCTTCCGTTTGTGAAGCGAATTTCCGATTTTCATTTGCTACTGTTACTAGCCAGGGTGTTAGACGTGAGCTCTGACGTTCCTGCACTGGCTGAGTGCGTTCAGACCCAGACAGGCGTACCTGAAGGTTACAAAATATTAATCGAGTCTATGGCAAGTGCTGCTTGATATACATAGTGTCAACTATGACTGGTTACAGGAGCTTGTTCTTGATTCTCAGTTACTTTCTATCGTCTCTCTTATCAACTTAGAGATTGTAGTTATATTTTAACATACTGTCATCTAAAAATGGTTTTATGATAATTTATGTCATAACAAAATGCCTTCTTATGTCGTAACAAAATGGCTTCCATAAAAAGTCTTGTCTTGGACTAAAACTTCACGAGTAATGCTATCTATGGAGTTTTGGTCTTAAACTTTTAATTACTTACCTTATTGCTAAAATGGGTTTTTCCTAACTAAAATTTTTGTTTGTATAGTTTTTTTTTCTACTGGATAAAAATA ATGATGCTCAGAATTCGCAGTAGAGATGGTCTGGAGCGAGTCGCTGTAGAAAACCCACACATCACAATCGCTCAACTCAAAGCCATAATCCAATCCCAGCTCAAAATCCCAATCCACAACCAAACCCTCTCCACTAACCAAAATATTCTATTGGCTAAGACTCAGGATGATCTTTCCAAATTCACTGACATGTCTAATCCTAATACCTACCTCTCCTCGCTTAATTTGTCCCATGGGTCTATTGTCTTTCTCGCCTACGAGGGCGAGCGCACTGTTGCTGGGCCTACTGTCCATCCCGCCGGATCTTTTGGCCGTAAAATGACTATGGATGATCTAATTGCTAAGCAGATGCGGATCACTCGTCAAGAAAACCCGCACTGTGAATTGGTTTCTTTCGACCGGGATTGCGCCAATGCTTTCCAGCATTATGTTAATGAAACGCTAGCCTTCGCCGTCAAACGTGGGGGGATGATGTACGGAACCGTATCACCAGAAGGCAAGGTCGAGGTAGATTTCATATATGAGCCGCCACAGCAAGGGACTGAGGATAATTTACTGTTTTTCCGAGATCACGATGAGGAAAGATTGGTGGAAGCAATCGCAGTTGGGTTGGGAATGAGGAAAGTTGGGTTTATATTCACGCAGACGATAAGTCAGGACAAAAAAGACTACACCTTATCCAACAGGGAAGTACTCCAGGCGGCTCAGTTTCACTCTGAGAGCGAGTTGAAGGAGTGGGTGACAGCAGTTGTGAAGTTGGAGGTGAACGAGGATGGGGGTGCTGATGTTCATTTTGAGGCTTTTCAAATGAGTGACATGTGTATTAGATTGTTTAAGGAATGTTGGTTTGAGACGGATATTGGAGAGGATTTTGATCCCAAGCTCTCCAAGATGAAGAAGGACGTTGTTGTTGGTGTCAAAGACACTAGAGATGTTGACAATGATTTTTTCCTGGTCGTCGTCAAGATCCTCGACCATCAGGGTCCACTTTCGACAACATTTCCTATTGAAAACCGAAATGTTCCAGTGACCATGAAGGCATTGAAGAATCACCTAGACCGTTCAAAAGGGCTTCCGTTTGTGAAGCGAATTTCCGATTTTCATTTGCTACTGTTACTAGCCAGGGTGTTAGACGTGAGCTCTGACGTTCCTGCACTGGCTGAGTGCGTTCAGACCCAGACAGGCGTACCTGAAGGTTACAAAATATTAATCGAGTCTATGGCAAGTGCTGCTTGA MMLRIRSRDGLERVAVENPHITIAQLKAIIQSQLKIPIHNQTLSTNQNILLAKTQDDLSKFTDMSNPNTYLSSLNLSHGSIVFLAYEGERTVAGPTVHPAGSFGRKMTMDDLIAKQMRITRQENPHCELVSFDRDCANAFQHYVNETLAFAVKRGGMMYGTVSPEGKVEVDFIYEPPQQGTEDNLLFFRDHDEERLVEAIAVGLGMRKVGFIFTQTISQDKKDYTLSNREVLQAAQFHSESELKEWVTAVVKLEVNEDGGADVHFEAFQMSDMCIRLFKECWFETDIGEDFDPKLSKMKKDVVVGVKDTRDVDNDFFLVVVKILDHQGPLSTTFPIENRNVPVTMKALKNHLDRSKGLPFVKRISDFHLLLLLARVLDVSSDVPALAECVQTQTGVPEGYKILIESMASAA Homology
BLAST of Cucsat.G21255 vs. ExPASy Swiss-Prot
Match: Q9LYC2 (NPL4-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g63000 PE=1 SV=1) HSP 1 Score: 635.6 bits (1638), Expect = 4.0e-181 Identity = 305/411 (74.21%), Postives = 365/411 (88.81%), Query Frame = 0
BLAST of Cucsat.G21255 vs. ExPASy Swiss-Prot
Match: O82264 (NPL4-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At2g47970 PE=1 SV=1) HSP 1 Score: 625.2 bits (1611), Expect = 5.4e-178 Identity = 308/410 (75.12%), Postives = 359/410 (87.56%), Query Frame = 0
BLAST of Cucsat.G21255 vs. ExPASy Swiss-Prot
Match: Q9AS33 (NPL4-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0377700 PE=2 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 2.8e-126 Identity = 239/419 (57.04%), Postives = 306/419 (73.03%), Query Frame = 0
BLAST of Cucsat.G21255 vs. ExPASy Swiss-Prot
Match: Q8TAT6 (Nuclear protein localization protein 4 homolog OS=Homo sapiens OX=9606 GN=NPLOC4 PE=1 SV=3) HSP 1 Score: 95.5 bits (236), Expect = 1.5e-18 Identity = 93/331 (28.10%), Postives = 149/331 (45.02%), Query Frame = 0
BLAST of Cucsat.G21255 vs. ExPASy Swiss-Prot
Match: P60670 (Nuclear protein localization protein 4 homolog OS=Mus musculus OX=10090 GN=Nploc4 PE=1 SV=3) HSP 1 Score: 95.1 bits (235), Expect = 1.9e-18 Identity = 93/331 (28.10%), Postives = 149/331 (45.02%), Query Frame = 0
BLAST of Cucsat.G21255 vs. NCBI nr
Match: XP_004145952.1 (NPL4-like protein 1 [Cucumis sativus] >KGN49825.1 hypothetical protein Csa_000197 [Cucumis sativus]) HSP 1 Score: 816 bits (2109), Expect = 2.68e-298 Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0
BLAST of Cucsat.G21255 vs. NCBI nr
Match: XP_008437660.1 (PREDICTED: NPL4-like protein 1 [Cucumis melo]) HSP 1 Score: 805 bits (2079), Expect = 1.00e-293 Identity = 406/411 (98.78%), Postives = 407/411 (99.03%), Query Frame = 0
BLAST of Cucsat.G21255 vs. NCBI nr
Match: XP_038874364.1 (NPL4-like protein 1 [Benincasa hispida]) HSP 1 Score: 791 bits (2044), Expect = 2.17e-288 Identity = 399/411 (97.08%), Postives = 402/411 (97.81%), Query Frame = 0
BLAST of Cucsat.G21255 vs. NCBI nr
Match: XP_022155640.1 (NPL4-like protein 1 [Momordica charantia]) HSP 1 Score: 772 bits (1993), Expect = 1.28e-280 Identity = 387/411 (94.16%), Postives = 399/411 (97.08%), Query Frame = 0
BLAST of Cucsat.G21255 vs. NCBI nr
Match: XP_022958337.1 (NPL4-like protein 1 [Cucurbita moschata] >XP_023534714.1 NPL4-like protein 1 [Cucurbita pepo subsp. pepo] >KAG7035781.1 NPL4-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 760 bits (1962), Expect = 6.80e-276 Identity = 384/411 (93.43%), Postives = 395/411 (96.11%), Query Frame = 0
BLAST of Cucsat.G21255 vs. ExPASy TrEMBL
Match: A0A0A0KJC3 (MPN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139050 PE=3 SV=1) HSP 1 Score: 816 bits (2109), Expect = 1.30e-298 Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0
BLAST of Cucsat.G21255 vs. ExPASy TrEMBL
Match: A0A1S3AU81 (NPL4-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103483000 PE=3 SV=1) HSP 1 Score: 805 bits (2079), Expect = 4.86e-294 Identity = 406/411 (98.78%), Postives = 407/411 (99.03%), Query Frame = 0
BLAST of Cucsat.G21255 vs. ExPASy TrEMBL
Match: A0A6J1DMZ8 (NPL4-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111022722 PE=3 SV=1) HSP 1 Score: 772 bits (1993), Expect = 6.21e-281 Identity = 387/411 (94.16%), Postives = 399/411 (97.08%), Query Frame = 0
BLAST of Cucsat.G21255 vs. ExPASy TrEMBL
Match: A0A6J1H1K2 (NPL4-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111459587 PE=3 SV=1) HSP 1 Score: 760 bits (1962), Expect = 3.29e-276 Identity = 384/411 (93.43%), Postives = 395/411 (96.11%), Query Frame = 0
BLAST of Cucsat.G21255 vs. ExPASy TrEMBL
Match: A0A6J1K7Q3 (NPL4-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111490933 PE=3 SV=1) HSP 1 Score: 756 bits (1952), Expect = 1.10e-274 Identity = 381/411 (92.70%), Postives = 394/411 (95.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|