Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATTCAACTGGACAAGGTAATTATGGTTAATATCAAAACGTTGAAGGTATGAATCTTTACTTTACATATGATGTTGCTACAACAATTTTGGGTCTACACTGTCGATTCTTAACTGGTGTTAATTATATATGTATCACAACGAATTACAAATTGTCATTTTTGTGGTTGTGCGTGTGCGGTCGCTGACAAATTCGTGTTAATGTGTACATCTACGGTATGATGTACTCATCTCTTCTTTGGCTTCGTTCACATGCAGGTGCAATGCAAGGTGATGATGCAAATAGACGTCGTCATGATCGAGACTTTTGGCATTCACGACAGGCGTTTTTAAAAAGCTATAACTTATCCAATGGATATAGAAGAGATGATGGATTGAAAGGCAAGATGAAGAGGACGATGAAAGAGCTCAATAGATCAACTAGTCGAATGGTTGGAGGCATTTGTGAAGACATGGCTAAAAGGAAGTTTGGAATTAGGGTTTATAGGCTCACGATAAGTCTCCCATCAATGGTTTTTATGACAGTGAGGTGTTTTTTGCCATCATTTAGGAACAAAGAGAATACACTACAAACATATAGTTACTAAATTCTCAATGTATGACTAAAATCTCACACACTAAAAAGATAAAAGTTCATGTGCTT
Coding sequence (CDS)
ATGCAAGGTGATGATGCAAATAGACGTCGTCATGATCGAGACTTTTGGCATTCACGACAGGCGTTTTTAAAAAGCTATAACTTATCCAATGGATATAGAAGAGATGATGGATTGAAAGGCAAGATGAAGAGGACGATGAAAGAGCTCAATAGATCAACTAGTCGAATGGTTGGAGGCATTTGTGAAGACATGGCTAAAAGGAAGTTTGGAATTAGGGTTTATAGGCTCACGATAAGTCTCCCATCAATGGTTTTTATGACAGTGAGGTGTTTTTTGCCATCATTTAGGAACAAAGAGAATACACTACAAACATATAGTTACTAA
Protein sequence
MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRKFGIRVYRLTISLPSMVFMTVRCFLPSFRNKENTLQTYSY
Homology
BLAST of Cucsat.G16766 vs. NCBI nr
Match:
KGN53119.1 (hypothetical protein Csa_015375 [Cucumis sativus])
HSP 1 Score: 186 bits (471), Expect = 7.92e-59
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query: 10 MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 69
MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI
Sbjct: 1 MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 60
Query: 70 CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF 100
CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF
Sbjct: 61 CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF 91
BLAST of Cucsat.G16766 vs. NCBI nr
Match:
XP_030940520.1 (uncharacterized protein LOC115965432 [Quercus lobata])
HSP 1 Score: 85.1 bits (209), Expect = 1.19e-18
Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 0
Query: 18 RRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRK 77
RRHDRD+W++R+AFL SY+ S ++G K K++R++KELN + +V I M+KRK
Sbjct: 43 RRHDRDYWYARRAFLNSYHFSE----ENGFKYKLRRSVKELNEVATGVVTDIRRKMSKRK 102
Query: 78 FGIRVYRLTISLPSMVFMTVRCF 100
GIRVYR T++L S+V +++RCF
Sbjct: 103 LGIRVYRFTVALQSLVLLSIRCF 121
BLAST of Cucsat.G16766 vs. NCBI nr
Match:
KAB1213284.1 (hypothetical protein CJ030_MR5G009621 [Morella rubra])
HSP 1 Score: 83.2 bits (204), Expect = 5.67e-18
Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 0
Query: 18 RRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICED-MAKR 77
R H RDFW +R+AFL SY+ S +G K K+KR++KELN + +VG I M+KR
Sbjct: 35 RCHSRDFWFARRAFLSSYHFSE----QNGFKDKLKRSVKELNMVATGIVGDIRRRIMSKR 94
Query: 78 KFGIRVYRLTISLPSMVFMTVRCF 100
+ GIRVYRLT++LPS+V +T+RCF
Sbjct: 95 RLGIRVYRLTVALPSLVLVTIRCF 114
BLAST of Cucsat.G16766 vs. NCBI nr
Match:
XP_023920324.1 (uncharacterized protein LOC112031845 [Quercus suber])
HSP 1 Score: 82.0 bits (201), Expect = 1.93e-17
Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 0
Query: 18 RRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRK 77
RRHDRD+W++R+AFL SY+ S ++G K K++ ++KELN + +V I M+KRK
Sbjct: 43 RRHDRDYWYARRAFLNSYHFSE----ENGFKYKLRGSVKELNEVATGVVTDIRRKMSKRK 102
Query: 78 FGIRVYRLTISLPSMVFMTVRCF 100
GIRVYR T++L S+V +++RCF
Sbjct: 103 LGIRVYRFTVALQSLVVLSIRCF 121
BLAST of Cucsat.G16766 vs. NCBI nr
Match:
KAF3958569.1 (hypothetical protein CMV_016545 [Castanea mollissima])
HSP 1 Score: 77.8 bits (190), Expect = 7.77e-16
Identity = 37/81 (45.68%), Postives = 57/81 (70.37%), Query Frame = 0
Query: 20 HDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRKFG 79
HDRD+W++R+AFL SY+ S + G K K++R++KELN + +V I M+ RK G
Sbjct: 40 HDRDYWYARRAFLNSYHFSE----EKGFKYKLRRSVKELNEVATGVVTDIRRKMSNRKLG 99
Query: 80 IRVYRLTISLPSMVFMTVRCF 100
IRVYR T+++ S+V +++RCF
Sbjct: 100 IRVYRFTVAMQSLVLLSIRCF 116
BLAST of Cucsat.G16766 vs. ExPASy TrEMBL
Match:
A0A0A0KW75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017070 PE=4 SV=1)
HSP 1 Score: 186 bits (471), Expect = 3.83e-59
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query: 10 MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 69
MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI
Sbjct: 1 MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 60
Query: 70 CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF 100
CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF
Sbjct: 61 CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF 91
BLAST of Cucsat.G16766 vs. ExPASy TrEMBL
Match:
A0A803Q2Y5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 5.48e-21
Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 0
Query: 20 HD-RDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRKF 79
HD RDFW SR+AFL SY+LSN R D G KGK+KR++KELN + I +++R+F
Sbjct: 38 HDGRDFWSSRRAFLSSYHLSNQQRADQGFKGKLKRSVKELNGVAVAALSNIRHQVSRRRF 97
Query: 80 GIRVYRLTISLPSMVFMTVRCF 100
G+RV+RLT+SLPS + ++VRCF
Sbjct: 98 GVRVFRLTMSLPSFLHVSVRCF 119
BLAST of Cucsat.G16766 vs. ExPASy TrEMBL
Match:
A0A7N2MT50 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 85.1 bits (209), Expect = 5.78e-19
Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 0
Query: 18 RRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRK 77
RRHDRD+W++R+AFL SY+ S ++G K K++R++KELN + +V I M+KRK
Sbjct: 43 RRHDRDYWYARRAFLNSYHFSE----ENGFKYKLRRSVKELNEVATGVVTDIRRKMSKRK 102
Query: 78 FGIRVYRLTISLPSMVFMTVRCF 100
GIRVYR T++L S+V +++RCF
Sbjct: 103 LGIRVYRFTVALQSLVLLSIRCF 121
BLAST of Cucsat.G16766 vs. ExPASy TrEMBL
Match:
A0A6A1VKL6 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G009621 PE=4 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 2.75e-18
Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 0
Query: 18 RRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICED-MAKR 77
R H RDFW +R+AFL SY+ S +G K K+KR++KELN + +VG I M+KR
Sbjct: 35 RCHSRDFWFARRAFLSSYHFSE----QNGFKDKLKRSVKELNMVATGIVGDIRRRIMSKR 94
Query: 78 KFGIRVYRLTISLPSMVFMTVRCF 100
+ GIRVYRLT++LPS+V +T+RCF
Sbjct: 95 RLGIRVYRLTVALPSLVLVTIRCF 114
BLAST of Cucsat.G16766 vs. ExPASy TrEMBL
Match:
A0A444Y8G7 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g094310 PE=4 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 4.24e-16
Identity = 36/91 (39.56%), Postives = 65/91 (71.43%), Query Frame = 0
Query: 10 MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 69
+ G ++RR H+ FW++R+ FLKSY+LS + + G K K+K++MKE+N + +V +
Sbjct: 20 VHGGWSSRRGHE--FWYARRTFLKSYHLSLEKKNNGGFKEKLKKSMKEVNEAAMGVVSRV 79
Query: 70 CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF 100
E ++K+K GI+ +++ +++PSMV +T+RCF
Sbjct: 80 REGVSKKKLGIKTFKVKMAIPSMVLVTIRCF 108
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KW75 | 3.83e-59 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017070 PE=4 SV=1 | [more] |
A0A803Q2Y5 | 5.48e-21 | 54.88 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A7N2MT50 | 5.78e-19 | 49.40 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A6A1VKL6 | 2.75e-18 | 52.38 | Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G009621 PE=4 SV=1 | [more] |
A0A444Y8G7 | 4.24e-16 | 39.56 | Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g094310 PE=4 SV=1 | [more] |