Cucsat.G16766 (gene) Cucumber (B10) v3

Overview
NameCucsat.G16766
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionDUF1336 domain-containing protein
Locationctg24: 698916 .. 699457 (-)
RNA-Seq ExpressionCucsat.G16766
SyntenyCucsat.G16766
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATTCAACTGGACAAGGTAATTATGGTTAATATCAAAACGTTGAAGGTATGAATCTTTACTTTACATATGATGTTGCTACAACAATTTTGGGTCTACACTGTCGATTCTTAACTGGTGTTAATTATATATGTATCACAACGAATTACAAATTGTCATTTTTGTGGTTGTGCGTGTGCGGTCGCTGACAAATTCGTGTTAATGTGTACATCTACGGTATGATGTACTCATCTCTTCTTTGGCTTCGTTCACATGCAGGTGCAATGCAAGGTGATGATGCAAATAGACGTCGTCATGATCGAGACTTTTGGCATTCACGACAGGCGTTTTTAAAAAGCTATAACTTATCCAATGGATATAGAAGAGATGATGGATTGAAAGGCAAGATGAAGAGGACGATGAAAGAGCTCAATAGATCAACTAGTCGAATGGTTGGAGGCATTTGTGAAGACATGGCTAAAAGGAAGTTTGGAATTAGGGTTTATAGGCTCACGATAAGTCTCCCATCAATGGTTTTTATGACAGTGAGGTGTTTTTTGCCATCATTTAGGAACAAAGAGAATACACTACAAACATATAGTTACTAAATTCTCAATGTATGACTAAAATCTCACACACTAAAAAGATAAAAGTTCATGTGCTT

Coding sequence (CDS)

ATGCAAGGTGATGATGCAAATAGACGTCGTCATGATCGAGACTTTTGGCATTCACGACAGGCGTTTTTAAAAAGCTATAACTTATCCAATGGATATAGAAGAGATGATGGATTGAAAGGCAAGATGAAGAGGACGATGAAAGAGCTCAATAGATCAACTAGTCGAATGGTTGGAGGCATTTGTGAAGACATGGCTAAAAGGAAGTTTGGAATTAGGGTTTATAGGCTCACGATAAGTCTCCCATCAATGGTTTTTATGACAGTGAGGTGTTTTTTGCCATCATTTAGGAACAAAGAGAATACACTACAAACATATAGTTACTAA

Protein sequence

MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRKFGIRVYRLTISLPSMVFMTVRCFLPSFRNKENTLQTYSY
Homology
BLAST of Cucsat.G16766 vs. NCBI nr
Match: KGN53119.1 (hypothetical protein Csa_015375 [Cucumis sativus])

HSP 1 Score: 186 bits (471), Expect = 7.92e-59
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0

Query: 10  MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 69
           MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI
Sbjct: 1   MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 60

Query: 70  CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF 100
           CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF
Sbjct: 61  CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF 91

BLAST of Cucsat.G16766 vs. NCBI nr
Match: XP_030940520.1 (uncharacterized protein LOC115965432 [Quercus lobata])

HSP 1 Score: 85.1 bits (209), Expect = 1.19e-18
Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 0

Query: 18  RRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRK 77
           RRHDRD+W++R+AFL SY+ S     ++G K K++R++KELN   + +V  I   M+KRK
Sbjct: 43  RRHDRDYWYARRAFLNSYHFSE----ENGFKYKLRRSVKELNEVATGVVTDIRRKMSKRK 102

Query: 78  FGIRVYRLTISLPSMVFMTVRCF 100
            GIRVYR T++L S+V +++RCF
Sbjct: 103 LGIRVYRFTVALQSLVLLSIRCF 121

BLAST of Cucsat.G16766 vs. NCBI nr
Match: KAB1213284.1 (hypothetical protein CJ030_MR5G009621 [Morella rubra])

HSP 1 Score: 83.2 bits (204), Expect = 5.67e-18
Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 0

Query: 18  RRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICED-MAKR 77
           R H RDFW +R+AFL SY+ S      +G K K+KR++KELN   + +VG I    M+KR
Sbjct: 35  RCHSRDFWFARRAFLSSYHFSE----QNGFKDKLKRSVKELNMVATGIVGDIRRRIMSKR 94

Query: 78  KFGIRVYRLTISLPSMVFMTVRCF 100
           + GIRVYRLT++LPS+V +T+RCF
Sbjct: 95  RLGIRVYRLTVALPSLVLVTIRCF 114

BLAST of Cucsat.G16766 vs. NCBI nr
Match: XP_023920324.1 (uncharacterized protein LOC112031845 [Quercus suber])

HSP 1 Score: 82.0 bits (201), Expect = 1.93e-17
Identity = 40/83 (48.19%), Postives = 60/83 (72.29%), Query Frame = 0

Query: 18  RRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRK 77
           RRHDRD+W++R+AFL SY+ S     ++G K K++ ++KELN   + +V  I   M+KRK
Sbjct: 43  RRHDRDYWYARRAFLNSYHFSE----ENGFKYKLRGSVKELNEVATGVVTDIRRKMSKRK 102

Query: 78  FGIRVYRLTISLPSMVFMTVRCF 100
            GIRVYR T++L S+V +++RCF
Sbjct: 103 LGIRVYRFTVALQSLVVLSIRCF 121

BLAST of Cucsat.G16766 vs. NCBI nr
Match: KAF3958569.1 (hypothetical protein CMV_016545 [Castanea mollissima])

HSP 1 Score: 77.8 bits (190), Expect = 7.77e-16
Identity = 37/81 (45.68%), Postives = 57/81 (70.37%), Query Frame = 0

Query: 20  HDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRKFG 79
           HDRD+W++R+AFL SY+ S     + G K K++R++KELN   + +V  I   M+ RK G
Sbjct: 40  HDRDYWYARRAFLNSYHFSE----EKGFKYKLRRSVKELNEVATGVVTDIRRKMSNRKLG 99

Query: 80  IRVYRLTISLPSMVFMTVRCF 100
           IRVYR T+++ S+V +++RCF
Sbjct: 100 IRVYRFTVAMQSLVLLSIRCF 116

BLAST of Cucsat.G16766 vs. ExPASy TrEMBL
Match: A0A0A0KW75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017070 PE=4 SV=1)

HSP 1 Score: 186 bits (471), Expect = 3.83e-59
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0

Query: 10  MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 69
           MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI
Sbjct: 1   MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 60

Query: 70  CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF 100
           CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF
Sbjct: 61  CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF 91

BLAST of Cucsat.G16766 vs. ExPASy TrEMBL
Match: A0A803Q2Y5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.48e-21
Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 0

Query: 20  HD-RDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRKF 79
           HD RDFW SR+AFL SY+LSN  R D G KGK+KR++KELN      +  I   +++R+F
Sbjct: 38  HDGRDFWSSRRAFLSSYHLSNQQRADQGFKGKLKRSVKELNGVAVAALSNIRHQVSRRRF 97

Query: 80  GIRVYRLTISLPSMVFMTVRCF 100
           G+RV+RLT+SLPS + ++VRCF
Sbjct: 98  GVRVFRLTMSLPSFLHVSVRCF 119

BLAST of Cucsat.G16766 vs. ExPASy TrEMBL
Match: A0A7N2MT50 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.78e-19
Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 0

Query: 18  RRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICEDMAKRK 77
           RRHDRD+W++R+AFL SY+ S     ++G K K++R++KELN   + +V  I   M+KRK
Sbjct: 43  RRHDRDYWYARRAFLNSYHFSE----ENGFKYKLRRSVKELNEVATGVVTDIRRKMSKRK 102

Query: 78  FGIRVYRLTISLPSMVFMTVRCF 100
            GIRVYR T++L S+V +++RCF
Sbjct: 103 LGIRVYRFTVALQSLVLLSIRCF 121

BLAST of Cucsat.G16766 vs. ExPASy TrEMBL
Match: A0A6A1VKL6 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G009621 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.75e-18
Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 0

Query: 18  RRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGICED-MAKR 77
           R H RDFW +R+AFL SY+ S      +G K K+KR++KELN   + +VG I    M+KR
Sbjct: 35  RCHSRDFWFARRAFLSSYHFSE----QNGFKDKLKRSVKELNMVATGIVGDIRRRIMSKR 94

Query: 78  KFGIRVYRLTISLPSMVFMTVRCF 100
           + GIRVYRLT++LPS+V +T+RCF
Sbjct: 95  RLGIRVYRLTVALPSLVLVTIRCF 114

BLAST of Cucsat.G16766 vs. ExPASy TrEMBL
Match: A0A444Y8G7 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g094310 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.24e-16
Identity = 36/91 (39.56%), Postives = 65/91 (71.43%), Query Frame = 0

Query: 10  MQGDDANRRRHDRDFWHSRQAFLKSYNLSNGYRRDDGLKGKMKRTMKELNRSTSRMVGGI 69
           + G  ++RR H+  FW++R+ FLKSY+LS   + + G K K+K++MKE+N +   +V  +
Sbjct: 20  VHGGWSSRRGHE--FWYARRTFLKSYHLSLEKKNNGGFKEKLKKSMKEVNEAAMGVVSRV 79

Query: 70  CEDMAKRKFGIRVYRLTISLPSMVFMTVRCF 100
            E ++K+K GI+ +++ +++PSMV +T+RCF
Sbjct: 80  REGVSKKKLGIKTFKVKMAIPSMVLVTIRCF 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN53119.17.92e-59100.00hypothetical protein Csa_015375 [Cucumis sativus][more]
XP_030940520.11.19e-1849.40uncharacterized protein LOC115965432 [Quercus lobata][more]
KAB1213284.15.67e-1852.38hypothetical protein CJ030_MR5G009621 [Morella rubra][more]
XP_023920324.11.93e-1748.19uncharacterized protein LOC112031845 [Quercus suber][more]
KAF3958569.17.77e-1645.68hypothetical protein CMV_016545 [Castanea mollissima][more]
Match NameE-valueIdentityDescription
A0A0A0KW753.83e-59100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017070 PE=4 SV=1[more]
A0A803Q2Y55.48e-2154.88Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A7N2MT505.78e-1949.40Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A6A1VKL62.75e-1852.38Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G009621 PE=4 SV=1[more]
A0A444Y8G74.24e-1639.56Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g094310 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G16766.T1Cucsat.G16766.T1mRNA
Cucsat.G16766.T2Cucsat.G16766.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane