Cucsat.G16621 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G16621
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	50S ribosomal protein L1
Location	ctg24: 1773914 .. 1778379 (+)
RNA-Seq Expression	Cucsat.G16621
Synteny	Cucsat.G16621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGGTGATGATTTCTCTTCAGGTCCATTTTATTACTATGCATACTACGTAGTGGCAAACTCGTTCTGGATTCTTATTCCCTCGCTTATCGGTATACGGTGTTGGAAGAAAATTTGCATTGCAATGAGCATTGAAAGCCAAACGAAAACCAAAACCCTCTAAGTTATTACTCATCGGTTAAGTGTACTACACACAAAATTCTTGTTGTATTATTGCATGTCATTCAGTAAACAAGACATTGCCGGAATTTGAACGTTTACTTGAAAATTATCTTTGGAGTGTTGATTGATTGTATTAATAGTAGAGATGGAACCTTCAACCTCTAAGTAACAAGGTTATCTTAATTACTATAAATTAAAATTAAGCTCATTTAGTAAGGGTTGATTGAATTTAGGCTATTTGAATTTGCATATGGGTAAAGTGTTTCTTAACTTATTATTATTATTATTGTTTTATACCATTAGATTTGCTATGCAAACCTGTAAAGTTTGAGTGAACTATGACAAATGAAGAGGCATTGTTAAACTGGTGGATTTTCGCAAAGGAATTATGGTAATTAGAGTAAATGTATGGATGATTGTTAAAGAAAACTTTGAATTCAATTCTAATTGATTTTAATTAATCAAGAATTAAAAACCAATTAAACACCAAACAAAATAAAAAGTAATCTAATTTTAACTAGAATCCAAGAAAAGGGGGAAAAAATAGCAGAATGAGAATTAGGACACCCAAGTAGCCAAAAGAGAAAAAGGATATTAAGTCAAACCTATATAACATGCAATCTAAGAAATTAAAATAATTCACAAACAAACAAACAACAGAATATCAACTTAAGAGCACAAAATAATGATCCAAGATGAAGGAAAGAAAGAGATTATGAGAGATGATGCGAGGAAGTAGTCCTTTTTACTTTGCGTATAGATATCCAAAATACGATATGCGTCAAATTTCAATTGAGTGCAGTAGAGAGGGCCGAGGGGGACGTACTGTTTCTTTCAAGGGGTGAATGAGAGAGAGTAATTAAAATGAAAGAGAAAGATTGTGTAGATAAAAATAGGAAAGAAGAAGTTTGGGTAAAAAGGTAGTAGTGATAGGAAGGTGATTTTTTTTATTTTATTTTTAATTGATGAAAGAAACAATGAAGTAGAAGCTATTAATGGGAGGAATTGAGAGCTAATTCAATTTTATAGGGAGGATCTATCTCTATGAAATGATTCATGGAGATATAATTCATGGGTCACAATGCTCTTATTTAAGAGTTTTTAGATTGGATTGAAATTGTTGGAATAATTTACAATTCAAAAAGTGAGATCAAAGTAATATTAGGTTTTTAGTTGAAAGTATATGAATAATAACATCAAAGAATGTCCTTTGTTTTAAATGGCTGGAGAATAATAAGAAAAAAAATATTTTATACATCATTATCAAAAGTTTTAGGAGTTATAATAACGTGATTTTCAATCTACCGTAGATTTCTCTATCCATAAATTTTGTTGACGAAAATTCTATAATTCAGTAAAAATAATCTGAAAAAAATGTAGGGAGTGAGACTTGAACCTTCATAAAAGAGTTTAGATAATATCTTTTCACCTAGTTAACTACTAATATTGATATTATATGAGTTTTTTTTATATATTTATATAAAAAAATAAATTTAGAGGGAGCTTCCATTCCCCTATACTAAATCTGTTAATAATTACTGACATAACTTTTTAATATGTTTATAAGGTGTAAATGATATACATTATGTTCTATTGCAAGAATGTATTTCAATAGGGTAATTGTAGTCCCTACATACATGTATGAAAAGCGATTAGATTATTGTGTACACTAATATCACGCTGCATCGATATGATAGTTAGTTGACGTATAAGTTTGACGATCATTTTCACATGTTTATGTTTTAGCTATCAAACATAACGTCTACAAATTTTTCGTTGTTTTAATAATGTTGAATGGGTTTAATCGACATAAATTTTGAAGTTTTATCTTAAAGATATTTTTTTAAAACAATAAAAATTAGTTTATTACGAATTTGAGAGTTAAATTTTTACTAGAGGGTCTAATTTTAATATTTATATAAACTTAAAGGGCTCATTTGTTATAACTAAAAGTTTGTTTGAGAGCATAATTAACTGGCCTATATGTTAGGGTGTCCTTTGCAATTTCCAAAATAAATGAAGAAAATAGCATAGACGGTCACAACGGACCGGACCGGGGCGGCCGGACTCGACTCATATTTCTAAACCAAGAAGCTGCGATCTCTTCCCGACTTAAACCTCTAAAACCACAGTTTATTTCTTCTCCATCTTGAGGAGCTGCAACCCATCAATGGCAGTTCTCAAGCTCATCCTCACTCATGCTCGCCGCCATTCCTTTGCCAGACCTCCTTCTCTTTCAACTTCTCACTTCCTTCACTTTCGAAGATCACTCTCTTCCTCTCAATCTGATTCTAACCCAGATCCCGATTCTCCCCCTGATCAATCCTCTCCAAGAACCTCTCGTTCCGTTCCCATTCAGCCAGTTTCCTACGCCGTCAAGCCCAAGCCACAAGCCGATGAGAATCAAGATTCCCCAGTAACGCTTCAATCTCCACCGCCTCCACAGGGGCCGCCGCCAAGGCCTGAAGGTCGGAGGACGTGGACTCGTGAGGATGTTCGATATATGAAGGATGCTCCAACTATAACTCCTGTTTCTTATGCGGCACGTGTTGCTCCGCTTCCGGAAGATACGGGTTCGGCTTCCGGTGGAGGAGAAGAGGGTGTGGTGACTGAGCAAATGGAGGAGGAAAGGAAGAAAATTGAGGCGGCGAATCAATGGAGGAGGAGGGTTTTGAGGGTTGCGGAGGAGGAGAAAGTTACTGCTCCATTTCCGATGCTGATCAAAGTCGAGAAGAAGGAACAGAAGGTAGTTCTTGATTTGATAGACGCTATCCGGCAAGTGAAGGTCAGTGTATAAGATTGTGGTTTTAACTTTTCATGGGAAGTTTCTCTAATTCCTGCATTTTGGGAGAATTGAAAGTTGTAGATTGTAGAATATTTGTCTACATGATCTTTGAAGTTGTAAAATGAACGTGCTTTAGAAATGGTTATTGACAATCCCATCCTTTAATTTTCATTTTTTGTTCTTTTTCTTAAAATTCAAGTTCAGGCTGCTGCCAAGGGAAATTTTGATGAGACTGTTGAAGCACATGCAAGGTTGGGGGTTGATGCTAGGAAAATGGTATTGCGTTTATTATTTTTGTACTCAGTGGATTACTCGCTCTCAGTAGGAATTAAGCTTGAATGATTCTGTTACTAGCCTAGATTGGAACTACGGCATTTTAGGAGAGAAAGGAAACCTGGAAATTTCCTTACTCAACTGGTTTATTAGAATGTGATATCCGTTAACGGTTCAGTTTAACCTGACCTTAATAGAGTTTTTAAAGTAGGTTGTCAGAGGGCATATATACGAATGATTTGTCTGATTCACTATTTAAATTTGTTAAAAAGTTTAAATGTGTCTGTTGTTTACTCTGACACTCATTTTATATAACTTCTGAAAGGTATCCACATCCTTTATTTTTAATGAACATGAGATAAAAATGTCTCTTTCACCAGCTGGTTCTGTTCTTTCGTTCTTTAGTATTCTACCTACGTAGTTCTTGCTATGTATTTATCGACTGCAATGTTGTTTGCATTCATGACTTTTTTCCTCTAAAATGCAGCAAGTTCTGGGTAACATGACTCTGCCTCATTCCATTGGGAAGGTAAGCATGTGAATTCTGTTTGAATGAGCATGTCACATTGGAACTCAATATATAATTAATTTGTTGAAAAAATATATATTACCTTTCAGACTGTCAAAGTGGCTTTCTTTGCTGAAGGGGCTGACGCTGAGGAAGCAAGGGCTGCTGGAGCTGATATTGTAGGTGGCCTTGAACTAATAGAGCAAATTGCAAGTAAGAACTGAACTGACCCTATTGGTTTCCTTTTTATTATTAGGGAAAATTTTATTTCATTCTTGTACTTGAACCTATTCAATGAATCAATTTTTCCCTTAAAATTTCAAGTTGTTCAAATTAAATTTAATCCTAATGTTATGAGAGGTGGAATTAGCCCTTTTAAGGTCTCTCTATATTGTCTAGGATTGTCATGAAAAAATAACAGCTTAAGAAGTTTTGTGGAAGTGCACCTAAGTATCGGTTCTTCTTCTTGGATAAACCTTCTCATAATATAGTTCAAATGGGCCCAACGAACATGATCAAAAGCTTTGCAAAATCAAGTTGGTTGTGTTAGTTAGATGAACTTGAATTTCGAACTAATAATTGTTTGGGACTTCATTTCTTTAACTTTATATATGCAGGCAGTCGGAAATTCAATGCTGATAAGTGTTTCTCTACCCCTGAAATGATGAGGCGCATTGGCAAGGTTTATGGAAATTAACTTTTTGTGCATTGTATTGTTCTATGCTGATGGCTGTGTATTCAAGAAGAATATTTTTATAAAACATTTACTCGAAGTTTGATGTTATTGGTGTTTAGATTTCCAAGATTTTGAGACAGCGTGGATTGCTACCAGATCCTAAAGTGAGCACACAATCCTCTGTTTCTTTGGTGTTCCATTGCTTATAGATTGAAATCAAATCAGATGTGCTGACATATTGTATAGCTAGGTACTGTGACCAGTGATATCAAAGGGGCCTTAAAGAAAGCAAGAGAAGGACACATGCATTTTAAAATGGATTCCACATCTATTGTGCATGTGGGGCTTGGGAAGGTAAAATAACTTTAGTTTGAAGCATATAGCTTACTTTCATAAGGAATGCAGATGCTGAAGCAGTTTCAGAAAGTACCCATCTAATTAGCACAAACTGTTTCTTGCAGGTGAGTCATTCGGAAGAGTTCTTACGAGAAAATATTGGTGCATTTGTGAATGCTCTTTTGCTTGCAAAGCCTGTTGGCTTGAAAAAAGGCAAGTTGTACTCTTTTTTCCCCCCATGATACAAATTCATTCAACATTGAACTTCAGTGCTTTTACTACTTTTACGAAAAATGTTCCTATCAACGGACTGACTCTTCTGCCGATAATCATAGCATTTTCTTTGGTTTCTCTGACTGAAATTATATGTACTTGCAGCCTCAAAATATGCTGGATATTTAAATTCCTTCCACATATGTAGCACGGTAATTCTCTCAACTATTGTTATGGCCATTGCAACACTGAATTTCTTAGGAGCATAGTGATACATTGTTGAGTTCAACACTAAAATTATTGTGTGAAAATCTCTCAAGGATCTACTAGGATCATGCAATAGTAATCATGCATGAGTTTCTAACTCCAAACTTGATGAACATGGATCATGGAGGTCCTTGGGACAAATATTGTGATTTCATAAACGGGCTTTCTTTCATTGCAACTTTAAGATCTTATTTTGATGTTAAGTCTAGATATGTATTGCTATAGGCTGCAAGTTATCTGCCTCTTCCTTTTGTGAAATTCCTAAAACTGTTTAAAAAAGTATGTGTCTGTGCTATTTGGATGAATGAGTCACTCAGATGTATGAACATTTTGTGTCAGAATCTGTGAATGTCTTGGCATGAAAATAAGAAGTTCAACGACTCCAAAAATTCTCATAGTACTATTTTGCTATCAAGGATATTGAATAATTCATCTGTAGCATACATATTTAAAATAGTTAAGGGAATGTCGGCTGTTTTGACCAATGATAAATCTTATAAAATGTCTGAAAGGTTAGTAAAGGATATGAGACATGAGACAGTTTATGTTCTAAATATTGACCATAAGACCCCATTCTCTATTTGTCCATCCTTTATTTTTGTAGGTGATAGAATGCTAAGGAATATTATTCAGTATTGAGGGCATGTTAGTTATCAGCTAAGGAAGGGTTATGGTGATCATAAAATAGGGAGAGAATAGGAAATTGTTTAATATTCTAGGCTCTAGTATCATTCCACAAATGATAAAAAAGGAGGTTTCAAGTACCTTAAATACTTGGGAAAGTTTTGTTGTAATTCTGATCCTTATATTTCACTACGTTTGGAGTTCTATTGGTAGGCTATTTATAAGTTGATGCATGTCAGTTTTACTTCCAAATAATTTGTTTATAGTACATGTTCATAAACCGAAATGATGGTTGCACACTTCGCTGATACATATCTCCTCTTTGGGATCTTATATCCTCTTAGTTGCACCTACTGAATGTCTACTAAATGGTGAAATAACTCATTATTTTTGTAATTTGCAGATGGGTCCCGGATTCCCAATCACAATACAATCATTGTCCAAAGTTGCAGATCAATACAACAGAAAGTACTTAAGTGGTGTGGTCCGATGAAATCTAAAGTTGTAGGTTTTTTCGTAGCCATTTTTTCATCTTTGATCTCCCTTTTCCCCAATTATAATTCAATTGTTATAAAGCAGGAAGTAGTCTAGATTGGATTGGATTATGTTCAACTATTTATTGAGGACATTCCATCTTTTTTGTGTACTGAGGTAGAAACTGTTAGCTTTTACTGAATAGCAGCAGAGTCATTTTGATTTTGGCTTTGCTCTGTTTGTTGTATTTACTTGATCGATCTTCTGGGCTCTTGCAGTTTGTTTATCACTAAACACTAGCTGTGGTTTTTGTGGTCTTCAGTACTCCTTGTGACTTGTGAGACTCATAGCTGCTTGTGGAAAATAAAAGGCAAGCTTTCTTATAAAGATAAAGTCTGGATTTGTCAAACAGTTCGGATCTCTTCATTTTTCTTTCTCTATTAATTGAATCAGTGATTAGTTGTCTTTTCTGATCTTACAAATTGAGGTATGAATTACTTATTGGGAGAGTTGATGGTAATTTAAAAAGTAGGTTGTATGTTTGTGGTTTACTTGTATTTTGTAATCAATATGAAATAGCTT

Coding sequence (CDS)

ATGGCAGTTCTCAAGCTCATCCTCACTCATGCTCGCCGCCATTCCTTTGCCAGACCTCCTTCTCTTTCAACTTCTCACTTCCTTCACTTTCGAAGATCACTCTCTTCCTCTCAATCTGATTCTAACCCAGATCCCGATTCTCCCCCTGATCAATCCTCTCCAAGAACCTCTCGTTCCGTTCCCATTCAGCCAGTTTCCTACGCCGTCAAGCCCAAGCCACAAGCCGATGAGAATCAAGATTCCCCAGTAACGCTTCAATCTCCACCGCCTCCACAGGGGCCGCCGCCAAGGCCTGAAGGTCGGAGGACGTGGACTCGTGAGGATGTTCGATATATGAAGGATGCTCCAACTATAACTCCTGTTTCTTATGCGGCACGTGTTGCTCCGCTTCCGGAAGATACGGGTTCGGCTTCCGGTGGAGGAGAAGAGGGTGTGGTGACTGAGCAAATGGAGGAGGAAAGGAAGAAAATTGAGGCGGCGAATCAATGGAGGAGGAGGGTTTTGAGGGTTGCGGAGGAGGAGAAAGTTACTGCTCCATTTCCGATGCTGATCAAAGTCGAGAAGAAGGAACAGAAGGTAGTTCTTGATTTGATAGACGCTATCCGGCAAGTGAAGGCTGCTGCCAAGGGAAATTTTGATGAGACTGTTGAAGCACATGCAAGGTTGGGGGTTGATGCTAGGAAAATGCAAGTTCTGGGTAACATGACTCTGCCTCATTCCATTGGGAAGACTGTCAAAGTGGCTTTCTTTGCTGAAGGGGCTGACGCTGAGGAAGCAAGGGCTGCTGGAGCTGATATTGTAGGTGGCCTTGAACTAATAGAGCAAATTGCAAGCAGTCGGAAATTCAATGCTGATAAGTGTTTCTCTACCCCTGAAATGATGAGGCGCATTGGCAAGATTTCCAAGATTTTGAGACAGCGTGGATTGCTACCAGATCCTAAACTAGGTACTGTGACCAGTGATATCAAAGGGGCCTTAAAGAAAGCAAGAGAAGGACACATGCATTTTAAAATGGATTCCACATCTATTGTGCATGTGGGGCTTGGGAAGGTGAGTCATTCGGAAGAGTTCTTACGAGAAAATATTGGTGCATTTGTGAATGCTCTTTTGCTTGCAAAGCCTGTTGGCTTGAAAAAAGCCTCAAAATATGCTGGATATTTAAATTCCTTCCACATATGTAGCACGATGGGTCCCGGATTCCCAATCACAATACAATCATTGTCCAAAGTTGCAGATCAATACAACAGAAAGTACTTAAGTGGTGTGGTCCGATGA

Protein sequence

MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSVPIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPFPMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLSGVVR

Homology

[Close]

BLAST of Cucsat.G16621 vs. ExPASy Swiss-Prot
Match: A4WVL9 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) OX=349102 GN=rplA PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.0e-46
Identity = 99/217 (45.62%), Postives = 138/217 (63.59%), Query Frame = 0


Query: 192 KVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVKVAF 251
           K ++ + DA+  +K AA   FDET+E    LGVD R     V G +TLP+  GKTV+VA 
Sbjct: 18  KDMVSVEDAVALIKGAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAV 77

Query: 252 FAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGL 311
           FA GA A+EA+AAGADIVG  +L+E I S  K   D+C +TP+MM  +G++ KIL  R L
Sbjct: 78  FARGAKADEAKAAGADIVGAEDLMETIQSG-KIEFDRCIATPDMMPLVGRLGKILGPRNL 137

Query: 312 LPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNAL 371
           +P+PK+GTVT D+ GA+  A+ G + FK++   ++H G+GK+S   E L +N+ AFV+A+
Sbjct: 138 MPNPKVGTVTMDVAGAVGNAKGGEVQFKVEKAGVIHAGVGKISFDAEKLAQNVRAFVDAV 197

Query: 372 LLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQS 407
             AKP G K       YL    + STMGPG  + + S
Sbjct: 198 NRAKPAGAK-----GTYLKKVSLSSTMGPGVSVDLAS 228

[Close]

BLAST of Cucsat.G16621 vs. ExPASy Swiss-Prot
Match: A3PGI6 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) OX=349101 GN=rplA1 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45
Identity = 98/217 (45.16%), Postives = 139/217 (64.06%), Query Frame = 0


Query: 192 KVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVKVAF 251
           K ++ + DA+  +K AA   FDET+E    LGVD R     V G +TLP+  GKTV+VA 
Sbjct: 18  KDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAV 77

Query: 252 FAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGL 311
           FA GA A+EA+AAGADIVG  +L+E I S  K   D+C +TP+MM  +G++ KIL  R L
Sbjct: 78  FARGAKADEAKAAGADIVGAEDLMETIQSG-KIEFDRCIATPDMMPLVGRLGKILGPRNL 137

Query: 312 LPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNAL 371
           +P+PK+GTVT D+K A++ A+ G + FK++   ++H G+GK+S   + L +N+ AFV+A+
Sbjct: 138 MPNPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDAV 197

Query: 372 LLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQS 407
             AKP G K       YL    + STMGPG  + + S
Sbjct: 198 NRAKPAGAK-----GTYLKKVSLSSTMGPGVSVDLTS 228

[Close]

BLAST of Cucsat.G16621 vs. ExPASy Swiss-Prot
Match: Q3J5T3 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=rplA PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45
Identity = 98/217 (45.16%), Postives = 139/217 (64.06%), Query Frame = 0


Query: 192 KVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVKVAF 251
           K ++ + DA+  +K AA   FDET+E    LGVD R     V G +TLP+  GKTV+VA 
Sbjct: 18  KDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAV 77

Query: 252 FAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGL 311
           FA GA A+EA+AAGADIVG  +L+E I S  K   D+C +TP+MM  +G++ KIL  R L
Sbjct: 78  FARGAKADEAKAAGADIVGAEDLMETIQSG-KIEFDRCIATPDMMPLVGRLGKILGPRNL 137

Query: 312 LPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNAL 371
           +P+PK+GTVT D+K A++ A+ G + FK++   ++H G+GK+S   + L +N+ AFV+A+
Sbjct: 138 MPNPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDAV 197

Query: 372 LLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQS 407
             AKP G K       YL    + STMGPG  + + S
Sbjct: 198 NRAKPAGAK-----GTYLKKVSLSSTMGPGVSVDLTS 228

[Close]

BLAST of Cucsat.G16621 vs. ExPASy Swiss-Prot
Match: B9KL80 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) OX=557760 GN=rplA PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45
Identity = 98/217 (45.16%), Postives = 139/217 (64.06%), Query Frame = 0


Query: 192 KVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVKVAF 251
           K ++ + DA+  +K AA   FDET+E    LGVD R     V G +TLP+  GKTV+VA 
Sbjct: 18  KDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAV 77

Query: 252 FAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGL 311
           FA GA A+EA+AAGADIVG  +L+E I S  K   D+C +TP+MM  +G++ KIL  R L
Sbjct: 78  FARGAKADEAKAAGADIVGAEDLMETIQSG-KIEFDRCIATPDMMPLVGRLGKILGPRNL 137

Query: 312 LPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNAL 371
           +P+PK+GTVT D+K A++ A+ G + FK++   ++H G+GK+S   + L +N+ AFV+A+
Sbjct: 138 MPNPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDAV 197

Query: 372 LLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQS 407
             AKP G K       YL    + STMGPG  + + S
Sbjct: 198 NRAKPAGAK-----GTYLKKVSLSSTMGPGVSVDLTS 228

[Close]

BLAST of Cucsat.G16621 vs. ExPASy Swiss-Prot
Match: B9JDR8 (50S ribosomal protein L1 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) OX=311403 GN=rplA PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.6e-45
Identity = 97/214 (45.33%), Postives = 136/214 (63.55%), Query Frame = 0


Query: 197 LIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVKVAFFAEGA 256
           L  AI  VK  A   FDET+E    LGVD R     V G + LP+  G++V+VA FA GA
Sbjct: 21  LTQAIGMVKERAIAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGA 80

Query: 257 DAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGLLPDPK 316
            A+EA+AAGADIVG  EL+E I    K + D+C +TP+MM  +G++ K+L  RG++P+PK
Sbjct: 81  KADEAKAAGADIVGAEELVE-IVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140

Query: 317 LGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNALLLAKP 376
           +GTVT D+KGA++ ++ G + F+++   IVH G+GK S   + L ENI AF +A++ AKP
Sbjct: 141 VGTVTMDVKGAVEASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKP 200

Query: 377 VGLKKASKYAGYLNSFHICSTMGPGFPITIQSLS 409
            G K       Y+    I STMGPG  I + S++
Sbjct: 201 AGAK-----GNYVKRVAISSTMGPGVKIELASVT 228

[Close]

BLAST of Cucsat.G16621 vs. NCBI nr
Match: XP_004152169.1 (uncharacterized protein LOC101207134 [Cucumis sativus] >KGN52948.1 hypothetical protein Csa_014531 [Cucumis sativus])

HSP 1 Score: 813 bits (2099), Expect = 2.48e-296
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP
Sbjct: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF
Sbjct: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS
Sbjct: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420

Query: 421 GVVR 424
           GVVR
Sbjct: 421 GVVR 424

[Close]

BLAST of Cucsat.G16621 vs. NCBI nr
Match: XP_008454163.1 (PREDICTED: 50S ribosomal protein L1 isoform X1 [Cucumis melo] >XP_008454164.1 PREDICTED: 50S ribosomal protein L1 isoform X1 [Cucumis melo])

HSP 1 Score: 769 bits (1985), Expect = 5.84e-279
Identity = 404/426 (94.84%), Postives = 413/426 (96.95%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFA+PPSLST  FLHFRRSLSSSQSDSNPDP+SPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPP--RPEGRRTWTREDVRYMKDAPTI 120
           PIQPVSYAVKPKP+ADENQDSP  LQSPPPPQGPPP  RPEGRRTWTREDVRYMKD+P+I
Sbjct: 61  PIQPVSYAVKPKPEADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSPSI 120

Query: 121 TPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTA 180
           TPVSYA RVAPLPEDTGS  GGGEEGVV+ QMEEERKKIEAANQWRRRVLRV EE+KVTA
Sbjct: 121 TPVSYATRVAPLPEDTGS--GGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKVTA 180

Query: 181 PFPMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPMLIKVEKKEQKVVLDL DAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIG 300
           HSIGKTVKVAFFAEGADAEEARAAGADIVGG+ELIEQIASSRKFNADKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360

Query: 361 RENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKY 420
           RENIGAFVNALLLAKP GLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYN+KY
Sbjct: 361 RENIGAFVNALLLAKPAGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNKKY 420

Query: 421 LSGVVR 424
           LSGVVR
Sbjct: 421 LSGVVR 424

[Close]

BLAST of Cucsat.G16621 vs. NCBI nr
Match: XP_016901449.1 (PREDICTED: 50S ribosomal protein L1 isoform X2 [Cucumis melo])

HSP 1 Score: 753 bits (1945), Expect = 6.99e-273
Identity = 396/418 (94.74%), Postives = 405/418 (96.89%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFA+PPSLST  FLHFRRSLSSSQSDSNPDP+SPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPP--RPEGRRTWTREDVRYMKDAPTI 120
           PIQPVSYAVKPKP+ADENQDSP  LQSPPPPQGPPP  RPEGRRTWTREDVRYMKD+P+I
Sbjct: 61  PIQPVSYAVKPKPEADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSPSI 120

Query: 121 TPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTA 180
           TPVSYA RVAPLPEDTGS  GGGEEGVV+ QMEEERKKIEAANQWRRRVLRV EE+KVTA
Sbjct: 121 TPVSYATRVAPLPEDTGS--GGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKVTA 180

Query: 181 PFPMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPMLIKVEKKEQKVVLDL DAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIG 300
           HSIGKTVKVAFFAEGADAEEARAAGADIVGG+ELIEQIASSRKFNADKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360

Query: 361 RENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNR 416
           RENIGAFVNALLLAKP GLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYN+
Sbjct: 361 RENIGAFVNALLLAKPAGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNK 416

[Close]

BLAST of Cucsat.G16621 vs. NCBI nr
Match: XP_038877977.1 (50S ribosomal protein L1 [Benincasa hispida] >XP_038877978.1 50S ribosomal protein L1 [Benincasa hispida])

HSP 1 Score: 702 bits (1812), Expect = 1.27e-252
Identity = 370/424 (87.26%), Postives = 388/424 (91.51%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAV KLILT +RRH  A+PPSLST  FL FRR LSSSQS+SNPDPDSP +QSSPRT RSV
Sbjct: 1   MAVFKLILTQSRRHRLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSPHNQSSPRTPRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYAVKPKPQ+DENQDSP +LQSPP    PPP P GRRTWTRED+RYMKD P+I  
Sbjct: 61  PIQPVSYAVKPKPQSDENQDSPESLQSPPATPRPPPSPAGRRTWTREDIRYMKDNPSIAS 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSY  RVAPLPED  SASGGGEEGV + QMEEERK+IEA NQWRR   RV EEEKVTAPF
Sbjct: 121 VSYPLRVAPLPEDRVSASGGGEEGVESGQMEEERKRIEAENQWRRS-FRVLEEEKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PMLIKVEKKEQKVVL+L+DAIRQVKA AKGNFDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMLIKVEKKEQKVVLELMDAIRQVKANAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTV+VAFFAEGADAEEARAAGADIVGG+ELIE+IA+SRKFN DKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVT DIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEE LRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTGDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEESLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           NIGAFVNALLLAKP GLKKASKYAGY+NSFHICSTMGPGFPITIQSLSKVADQYNRKYLS
Sbjct: 361 NIGAFVNALLLAKPAGLKKASKYAGYVNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420

Query: 421 GVVR 424
           GV+R
Sbjct: 421 GVIR 423

[Close]

BLAST of Cucsat.G16621 vs. NCBI nr
Match: KAG6581968.1 (hypothetical protein SDJN03_21970, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018387.1 rplA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 696 bits (1795), Expect = 4.92e-250
Identity = 361/424 (85.14%), Postives = 390/424 (91.98%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MA+ KLILT +RRH  A+ PSLST  FL FRRSLSSSQS+SNPDPDSPP++SS RT RS 
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNESS-RTPRSA 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYA+KPKPQ+D++ DSP + Q P  P+ PPP PEGRRTWTRED+RYMKD PTI P
Sbjct: 61  PIQPVSYAIKPKPQSDQDHDSPESPQPPSAPRRPPPSPEGRRTWTREDIRYMKDTPTIAP 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSY +RVAPLPED  SASGGGEEGV +EQMEEERKKIEA   WRRRV RVAEE+KVTAPF
Sbjct: 121 VSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PM+IKV+KKE KVVLDL+DAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTVKVAFFAEGADAEEARAAGADIVGG+ELIE+IA+SRKFN DKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEE LRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEESLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           NIGAFVNALLLAKPVGLKKASKYAGY+NSFHICSTMGPGFP+TIQSLSKVADQYN+K+LS
Sbjct: 361 NIGAFVNALLLAKPVGLKKASKYAGYVNSFHICSTMGPGFPVTIQSLSKVADQYNKKFLS 420

Query: 421 GVVR 424
           GV+R
Sbjct: 421 GVIR 423

[Close]

BLAST of Cucsat.G16621 vs. ExPASy TrEMBL
Match: A0A0A0KTS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007040 PE=4 SV=1)

HSP 1 Score: 813 bits (2099), Expect = 1.20e-296
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP
Sbjct: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF
Sbjct: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS
Sbjct: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420

Query: 421 GVVR 424
           GVVR
Sbjct: 421 GVVR 424

[Close]

BLAST of Cucsat.G16621 vs. ExPASy TrEMBL
Match: A0A1S3BZ70 (50S ribosomal protein L1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4 SV=1)

HSP 1 Score: 769 bits (1985), Expect = 2.83e-279
Identity = 404/426 (94.84%), Postives = 413/426 (96.95%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFA+PPSLST  FLHFRRSLSSSQSDSNPDP+SPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPP--RPEGRRTWTREDVRYMKDAPTI 120
           PIQPVSYAVKPKP+ADENQDSP  LQSPPPPQGPPP  RPEGRRTWTREDVRYMKD+P+I
Sbjct: 61  PIQPVSYAVKPKPEADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSPSI 120

Query: 121 TPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTA 180
           TPVSYA RVAPLPEDTGS  GGGEEGVV+ QMEEERKKIEAANQWRRRVLRV EE+KVTA
Sbjct: 121 TPVSYATRVAPLPEDTGS--GGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKVTA 180

Query: 181 PFPMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPMLIKVEKKEQKVVLDL DAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIG 300
           HSIGKTVKVAFFAEGADAEEARAAGADIVGG+ELIEQIASSRKFNADKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360

Query: 361 RENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKY 420
           RENIGAFVNALLLAKP GLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYN+KY
Sbjct: 361 RENIGAFVNALLLAKPAGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNKKY 420

Query: 421 LSGVVR 424
           LSGVVR
Sbjct: 421 LSGVVR 424

[Close]

BLAST of Cucsat.G16621 vs. ExPASy TrEMBL
Match: A0A1S4DZR3 (50S ribosomal protein L1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4 SV=1)

HSP 1 Score: 753 bits (1945), Expect = 3.38e-273
Identity = 396/418 (94.74%), Postives = 405/418 (96.89%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFA+PPSLST  FLHFRRSLSSSQSDSNPDP+SPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPP--RPEGRRTWTREDVRYMKDAPTI 120
           PIQPVSYAVKPKP+ADENQDSP  LQSPPPPQGPPP  RPEGRRTWTREDVRYMKD+P+I
Sbjct: 61  PIQPVSYAVKPKPEADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSPSI 120

Query: 121 TPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTA 180
           TPVSYA RVAPLPEDTGS  GGGEEGVV+ QMEEERKKIEAANQWRRRVLRV EE+KVTA
Sbjct: 121 TPVSYATRVAPLPEDTGS--GGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKVTA 180

Query: 181 PFPMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPMLIKVEKKEQKVVLDL DAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIG 300
           HSIGKTVKVAFFAEGADAEEARAAGADIVGG+ELIEQIASSRKFNADKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360

Query: 361 RENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNR 416
           RENIGAFVNALLLAKP GLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYN+
Sbjct: 361 RENIGAFVNALLLAKPAGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNK 416

[Close]

BLAST of Cucsat.G16621 vs. ExPASy TrEMBL
Match: A0A6J1GVQ7 (uncharacterized protein LOC111457596 OS=Cucurbita moschata OX=3662 GN=LOC111457596 PE=4 SV=1)

HSP 1 Score: 695 bits (1794), Expect = 3.38e-250
Identity = 360/424 (84.91%), Postives = 390/424 (91.98%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MA+ KLILT +RRH  A+ PSLST  FL FRRSLSSSQS+SNPDPDSPP++SS RT RS 
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNESS-RTPRSA 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYA+KPKPQ+D++ DSP + Q P  P+ PPP PEGRRTWTRED+RYMKD PTI P
Sbjct: 61  PIQPVSYAIKPKPQSDQDHDSPESPQPPSAPRRPPPSPEGRRTWTREDIRYMKDTPTIAP 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSY +RVAPLPED  SASGGGEEGV +EQMEEERKKIEA   WRRRV RVAEE+KVTAPF
Sbjct: 121 VSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PM+IKV+KKE KVVLDL+DAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTVKVAFFAEGADAEEARAAGADIVGG+ELIE+IA+SRKFN DKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEE LRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEESLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           N+GAFVNALLLAKPVGLKKASKYAGY+NSFHICSTMGPGFP+TIQSLSKVADQYN+K+LS
Sbjct: 361 NVGAFVNALLLAKPVGLKKASKYAGYVNSFHICSTMGPGFPVTIQSLSKVADQYNKKFLS 420

Query: 421 GVVR 424
           GV+R
Sbjct: 421 GVIR 423

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BLAST of Cucsat.G16621 vs. ExPASy TrEMBL
Match: A0A6J1ISN8 (uncharacterized protein LOC111479599 OS=Cucurbita maxima OX=3661 GN=LOC111479599 PE=4 SV=1)

HSP 1 Score: 686 bits (1771), Expect = 1.07e-246
Identity = 355/424 (83.73%), Postives = 389/424 (91.75%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MA+ KLILT +RRH  A+ PSLST  FL FRRSLSSSQS+SNPDPDSPP++SS RT RSV
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNESS-RTPRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYA+KPKPQ+D+++DSP + Q P  P+ PPP  EGR TWTRED+RYMKD P+I P
Sbjct: 61  PIQPVSYAIKPKPQSDQDRDSPESPQPPSAPRRPPPSSEGRTTWTREDIRYMKDTPSIAP 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSY +RVAPLPED  SASGGGEEGV +EQMEEERKKIEA   WRRRV RVAEE+KVTAPF
Sbjct: 121 VSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PM+IKV+KKE KVVLDL+DAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTVKVAFFA+GADAEEARAAGADIVGG+ELI++IA+SRKFN DKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVKVAFFADGADAEEARAAGADIVGGVELIQEIATSRKFNVDKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSE+ LRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEDLLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           NIGAFVNALLLAKP GLKKASKYAGY+NSFHICSTMGPGFP+TIQSLSKVADQYN+K+LS
Sbjct: 361 NIGAFVNALLLAKPAGLKKASKYAGYVNSFHICSTMGPGFPVTIQSLSKVADQYNKKFLS 420

Query: 421 GVVR 424
           GV+R
Sbjct: 421 GVIR 423

The following BLAST results are available for this feature:

BLAST of Cucsat.G16621 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4WVL9	5.0e-46	45.62	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4...	[more]
A3PGI6	1.1e-45	45.16	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4...	[more]
Q3J5T3	1.1e-45	45.16	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158...	[more]
B9KL80	1.1e-45	45.16	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) ...	[more]
B9JDR8	5.6e-45	45.33	50S ribosomal protein L1 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868...	[more]

BLAST of Cucsat.G16621 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152169.1	2.48e-296	100.00	uncharacterized protein LOC101207134 [Cucumis sativus] >KGN52948.1 hypothetical ...	[more]
XP_008454163.1	5.84e-279	94.84	PREDICTED: 50S ribosomal protein L1 isoform X1 [Cucumis melo] >XP_008454164.1 PR...	[more]
XP_016901449.1	6.99e-273	94.74	PREDICTED: 50S ribosomal protein L1 isoform X2 [Cucumis melo]	[more]
XP_038877977.1	1.27e-252	87.26	50S ribosomal protein L1 [Benincasa hispida] >XP_038877978.1 50S ribosomal prote...	[more]
KAG6581968.1	4.92e-250	85.14	hypothetical protein SDJN03_21970, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cucsat.G16621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTS4	1.20e-296	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007040 PE=4 SV=1	[more]
A0A1S3BZ70	2.83e-279	94.84	50S ribosomal protein L1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4...	[more]
A0A1S4DZR3	3.38e-273	94.74	50S ribosomal protein L1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4...	[more]
A0A6J1GVQ7	3.38e-250	84.91	uncharacterized protein LOC111457596 OS=Cucurbita moschata OX=3662 GN=LOC1114575...	[more]
A0A6J1ISN8	1.07e-246	83.73	uncharacterized protein LOC111479599 OS=Cucurbita maxima OX=3661 GN=LOC111479599...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 205..302 e-value: 6.9E-13 score: 48.8
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 197..302 e-value: 7.27153E-25 score: 97.2547
None	No IPR available	GENE3D	3.30.190.20		coord: 197..239 e-value: 2.5E-30 score: 107.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..63
None	No IPR available	PANTHER	PTHR36427	54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL	coord: 36..300
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 240..300 e-value: 2.5E-30 score: 107.5
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 186..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G16621.T1	Cucsat.G16621.T1	mRNA
Cucsat.G16621.T2	Cucsat.G16621.T2	mRNA
Cucsat.G16621.T8	Cucsat.G16621.T8	mRNA
Cucsat.G16621.T7	Cucsat.G16621.T7	mRNA
Cucsat.G16621.T10	Cucsat.G16621.T10	mRNA
Cucsat.G16621.T3	Cucsat.G16621.T3	mRNA
Cucsat.G16621.T4	Cucsat.G16621.T4	mRNA
Cucsat.G16621.T9	Cucsat.G16621.T9	mRNA
Cucsat.G16621.T6	Cucsat.G16621.T6	mRNA
Cucsat.G16621.T5	Cucsat.G16621.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding