Cucsat.G15022 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15022
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Protein RNA-directed DNA methylation 3
Location	ctg191: 93329 .. 94523 (+)
RNA-Seq Expression	Cucsat.G15022
Synteny	Cucsat.G15022

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGGATTTGGTGGCAGAGGTCGTGGAAGATGGAGCAGTGGAAGTGGTTCAAATGACAGTGACAGTGGGAGTGGGGGGTGGAGTGGTGGTGGTGATAGATCAGACCGAAGTGGAGGTGGATTTAGAGGTAGAGGCCGTGGAAGATGGAACCAAGAAGGTTCCTACGATGGTGACAATGGAGGGCAAAGAGGTGGATATGGAGGCCGAGGACGTGGGAGATGGAATCAAGAAAATGGTTCAAATGAAGGTGGTGACAATGGTGGGTGGAGTGGTGGTAGAGGTGGATTTGGAAGTCGAGGCCGTGGAAGTTGGAATCAAGACGATGGTGGTTCAGGAGGATGGAGTGGAGGAAATGGTGGTAGAGGCGGATTTGGCGGCCGAGGTCGTGGAAGGAGGAATCAAGACAGTTCAAATGATGGCAATAATGATGATAAACCTGCAAGCTGGAGCACAGGTTCAGGTAATAGTGGAGGGTGGAACAGTGGCGGTGGTGGTGGTGGTGGTGGTGCAGGATCTTGGAACCAAGGAGGTGATGAAAAGAACCAGCAGCAACATAGTTGGAAGTCTAGCAATGATGGCGGTCAGGGATCTGGTTGGAAGGAACCAAGTGGGAGTGATCACAATAATTGGGAATCATCTGGTTCTTCTGGTGCAGGTAATAGTTCTGGGTGGAACAATTCGACTACAGGCAAGGAGACGGAAGAGAGTGGTGGTCACAACAGCTGGAACCAAACGACAAAGACGGATTCTCAAGGTGGAGGCTGGCAGAAGTCAGCATCTAGTTGGAATGCCGGAACTGAGAATCAAACAGTGACCAAGGATGTGAGTTCAGTTTCTAAAGATGGAGGTTGGGGAAAGTCTGCTGAGCCATCAACCCTGGACAAAGAAATAGCCAACGTAGGTGCCCAAGGAGGAGGAGCAGCAGGTTGGGAGAAGCCTACATCTAGTTGGAATACAGAGCAGTCTCGAGGCGAAAACAACAGCGGAGGAGGACGAGGAGGAGCTCGGGGTAAATAAGGAAATCATTAAACATAATCTTCATAACATTATGCCCCTTTTGGGTCATAATGGATGTTCTAATAATCACAAACTATTGAATTGAGCATGCTTTGATTAACTAAGGAAATCATTAGGATTCAAATATCTTTCTCATTGTTTGAGAGTCTGTCTTGACCAATTGCTTCAATGATATTGT

Coding sequence (CDS)

GGTGGATTTGGTGGCAGAGGTCGTGGAAGATGGAGCAGTGGAAGTGGTTCAAATGACAGTGACAGTGGGAGTGGGGGGTGGAGTGGTGGTGGTGATAGATCAGACCGAAGTGGAGGTGGATTTAGAGGTAGAGGCCGTGGAAGATGGAACCAAGAAGGTTCCTACGATGGTGACAATGGAGGGCAAAGAGGTGGATATGGAGGCCGAGGACGTGGGAGATGGAATCAAGAAAATGGTTCAAATGAAGGTGGTGACAATGGTGGGTGGAGTGGTGGTAGAGGTGGATTTGGAAGTCGAGGTCGTGGAAGGAGGAATCAAGACAGTTCAAATGATGGCAATAATGATGATAAACCTGCAAGCTGGAGCACAGGTTCAGGTAATAGTGGAGGGTGGAACAGTGGCGGTGGTGGTGGTGGTGGTGGTGCAGGATCTTGGAACCAAGGAGGTGATGAAAAGAACCAGCAGCAACATAGTTGGAAGTCTAGCAATGATGGCGGTCAGGGATCTGGTTGGAAGGAACCAAGTGGGAGTGATCACAATAATTGGGAATCATCTGGTTCTTCTGGTGCAGGTAATAGTTCTGGGTGGAACAATTCGACTACAGGCAAGGAGACGGAAGAGAGTGGTGGTCACAACAGCTGGAACCAAACGACAAAGACGGATTCTCAAGGTGGAGGCTGGCAGAAGTCAGCATCTAGTTGGAATGCCGGAACTGAGAATCAAACAGTGACCAAGGATGTGAGTTCAGTTTCTAAAGATGGAGGTTGGGGAAAGTCTGCTGAGCCATCAACCCTGGACAAAGAAATAGCCAACGTAGGTGCCCAAGGAGGAGGAGCAGCAGGTTGGGAGAAGCCTACATCTAGTTGGAATACAGAGCAGTCTCGAGGCGAAAACAACAGCGGAGGAGGACGAGGAGGAGCTCGGGGTAAATAA

Protein sequence

GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSGGGFRGRGRGRWNQEGSYDGDNGGQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGRGGFGSRGRGRRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEKNQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGHNSWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIANVGAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK

Homology

[Close]

BLAST of Cucsat.G15022 vs. NCBI nr
Match: KAE8652013.1 (hypothetical protein Csa_006830 [Cucumis sativus])

HSP 1 Score: 545 bits (1404), Expect = 2.19e-178
Identity = 310/338 (91.72%), Postives = 310/338 (91.72%), Query Frame = 0


Query: 1    GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSGGGFRGRGRGRWNQEGSYDGDNG 60
            GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSGGGFRGRGRGRWNQEGSYDGDNG
Sbjct: 1291 GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSGGGFRGRGRGRWNQEGSYDGDNG 1350

Query: 61   GQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGRGGFGSRGRG------------------ 120
            GQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGRGGFGSRGRG                  
Sbjct: 1351 GQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGRGGFGSRGRGSWNQDDGGSGGWSGGNGG 1410

Query: 121  ----------RRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEK 180
                      RRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEK
Sbjct: 1411 RGGFGGRGRGRRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEK 1470

Query: 181  NQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGHN 240
            NQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGHN
Sbjct: 1471 NQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGHN 1530

Query: 241  SWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIANV 300
            SWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIANV
Sbjct: 1531 SWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIANV 1590

Query: 301  GAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK 310
            GAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK
Sbjct: 1591 GAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK 1628

[Close]

BLAST of Cucsat.G15022 vs. NCBI nr
Match: XP_031736956.1 (protein RNA-directed DNA methylation 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 545 bits (1404), Expect = 2.23e-178
Identity = 310/338 (91.72%), Postives = 310/338 (91.72%), Query Frame = 0


Query: 1    GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSGGGFRGRGRGRWNQEGSYDGDNG 60
            GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSGGGFRGRGRGRWNQEGSYDGDNG
Sbjct: 1292 GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSGGGFRGRGRGRWNQEGSYDGDNG 1351

Query: 61   GQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGRGGFGSRGRG------------------ 120
            GQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGRGGFGSRGRG                  
Sbjct: 1352 GQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGRGGFGSRGRGSWNQDDGGSGGWSGGNGG 1411

Query: 121  ----------RRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEK 180
                      RRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEK
Sbjct: 1412 RGGFGGRGRGRRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEK 1471

Query: 181  NQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGHN 240
            NQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGHN
Sbjct: 1472 NQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGHN 1531

Query: 241  SWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIANV 300
            SWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIANV
Sbjct: 1532 SWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIANV 1591

Query: 301  GAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK 310
            GAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK
Sbjct: 1592 GAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK 1629

[Close]

BLAST of Cucsat.G15022 vs. NCBI nr
Match: XP_031736955.1 (protein RNA-directed DNA methylation 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 545 bits (1404), Expect = 6.19e-178
Identity = 310/338 (91.72%), Postives = 310/338 (91.72%), Query Frame = 0


Query: 1    GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSGGGFRGRGRGRWNQEGSYDGDNG 60
            GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSGGGFRGRGRGRWNQEGSYDGDNG
Sbjct: 1352 GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSGGGFRGRGRGRWNQEGSYDGDNG 1411

Query: 61   GQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGRGGFGSRGRG------------------ 120
            GQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGRGGFGSRGRG                  
Sbjct: 1412 GQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGRGGFGSRGRGSWNQDDGGSGGWSGGNGG 1471

Query: 121  ----------RRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEK 180
                      RRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEK
Sbjct: 1472 RGGFGGRGRGRRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEK 1531

Query: 181  NQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGHN 240
            NQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGHN
Sbjct: 1532 NQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGHN 1591

Query: 241  SWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIANV 300
            SWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIANV
Sbjct: 1592 SWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIANV 1651

Query: 301  GAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK 310
            GAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK
Sbjct: 1652 GAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK 1689

[Close]

BLAST of Cucsat.G15022 vs. NCBI nr
Match: TYJ99969.1 (protein RNA-directed DNA methylation 3 [Cucumis melo var. makuwa])

HSP 1 Score: 454 bits (1167), Expect = 1.76e-143
Identity = 277/339 (81.71%), Postives = 286/339 (84.37%), Query Frame = 0


Query: 1    GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGG-DR----SDRSGGGFRGRGRGRWNQEG-S 60
            GGFGGRGRGRWSSGSGSND DSGSGGWSGGG DR    S+R GGGFRGRGRGRWNQEG S
Sbjct: 1403 GGFGGRGRGRWSSGSGSNDGDSGSGGWSGGGGDREKFGSERGGGGFRGRGRGRWNQEGGS 1462

Query: 61   YDGDNGGQRGGYGGRGRGRWNQENGSNEGGDNGG---------------------WSGG- 120
            YDGDNGG+RGGYGGRGRGRWNQENGSNEGGDNGG                     WSGG 
Sbjct: 1463 YDGDNGGRRGGYGGRGRGRWNQENGSNEGGDNGGRGGFGGRGRGRWNQDDGGSGGWSGGG 1522

Query: 121  -RGGFGSRGRGRRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDE 180
             RGGFG RGRGRRNQD SN+ NNDDKPASWS GSGNSGGW+S GG     AGSWNQGGDE
Sbjct: 1523 GRGGFGGRGRGRRNQDGSNESNNDDKPASWSAGSGNSGGWSSSGG-----AGSWNQGGDE 1582

Query: 181  KNQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGH 240
            KN+QQHSWKSSNDGGQGSGWKEPSG+DHNNW+SSGSSGAGNSSGWNNST  KE EESGG 
Sbjct: 1583 KNEQQHSWKSSNDGGQGSGWKEPSGNDHNNWKSSGSSGAGNSSGWNNSTAAKEMEESGGQ 1642

Query: 241  NSWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIAN 300
            NSW+Q+TKTDSQGGGWQKSASSWNAGTENQT TKDVSS SKDGGWGKS EPSTLDKE AN
Sbjct: 1643 NSWSQSTKTDSQGGGWQKSASSWNAGTENQTATKDVSSGSKDGGWGKSVEPSTLDKEKAN 1702

Query: 301  VGAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK 310
            VGAQGG A GWEKPTSSWNTEQSRGENNSGGG GGA GK
Sbjct: 1703 VGAQGG-AGGWEKPTSSWNTEQSRGENNSGGG-GGAWGK 1734

[Close]

BLAST of Cucsat.G15022 vs. NCBI nr
Match: XP_008456802.1 (PREDICTED: uncharacterized transmembrane protein DDB_G0289901-like, partial [Cucumis melo])

HSP 1 Score: 404 bits (1039), Expect = 7.78e-139
Identity = 239/293 (81.57%), Postives = 247/293 (84.30%), Query Frame = 0


Query: 42  RGRGRGRWNQEG-SYDGDNGGQRGGYGGRGRGRWNQENGSNEGGDNGG------------ 101
           RGRGRGRWNQEG SYDGDNGG+RGGYGGRGRGRWNQENGSNEGGDNGG            
Sbjct: 1   RGRGRGRWNQEGGSYDGDNGGRRGGYGGRGRGRWNQENGSNEGGDNGGRGGFGGRGRGRW 60

Query: 102 ---------WSGG--RGGFGSRGRGRRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGG 161
                    WSGG  RGGFG RGRGRRNQD SN+ NNDDKPASWS GSGNSGGW+S GG 
Sbjct: 61  NQDDGGSGGWSGGGGRGGFGGRGRGRRNQDGSNESNNDDKPASWSAGSGNSGGWSSSGG- 120

Query: 162 GGGGAGSWNQGGDEKNQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWN 221
               AGSWNQGGDEKN+QQHSWKSSNDGGQGSGWKEPSG+DHNNW+SSGSSGAGNSSGWN
Sbjct: 121 ----AGSWNQGGDEKNEQQHSWKSSNDGGQGSGWKEPSGNDHNNWKSSGSSGAGNSSGWN 180

Query: 222 NSTTGKETEESGGHNSWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWG 281
           NST  KE EESGG NSW+Q+TKTDSQGGGWQKSASSWNAGTENQT TKDVSS SKDGGWG
Sbjct: 181 NSTAAKEMEESGGQNSWSQSTKTDSQGGGWQKSASSWNAGTENQTATKDVSSGSKDGGWG 240

Query: 282 KSAEPSTLDKEIANVGAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK 310
           KS EPSTLDKE ANVGAQGG A GWEKPTSSWNTEQSRGENNSGGG GGA GK
Sbjct: 241 KSVEPSTLDKEKANVGAQGG-AGGWEKPTSSWNTEQSRGENNSGGG-GGAWGK 286

[Close]

BLAST of Cucsat.G15022 vs. ExPASy TrEMBL
Match: A0A5D3BLU8 (Protein RNA-directed DNA methylation 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00100 PE=4 SV=1)

HSP 1 Score: 454 bits (1167), Expect = 8.52e-144
Identity = 277/339 (81.71%), Postives = 286/339 (84.37%), Query Frame = 0


Query: 1    GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGG-DR----SDRSGGGFRGRGRGRWNQEG-S 60
            GGFGGRGRGRWSSGSGSND DSGSGGWSGGG DR    S+R GGGFRGRGRGRWNQEG S
Sbjct: 1403 GGFGGRGRGRWSSGSGSNDGDSGSGGWSGGGGDREKFGSERGGGGFRGRGRGRWNQEGGS 1462

Query: 61   YDGDNGGQRGGYGGRGRGRWNQENGSNEGGDNGG---------------------WSGG- 120
            YDGDNGG+RGGYGGRGRGRWNQENGSNEGGDNGG                     WSGG 
Sbjct: 1463 YDGDNGGRRGGYGGRGRGRWNQENGSNEGGDNGGRGGFGGRGRGRWNQDDGGSGGWSGGG 1522

Query: 121  -RGGFGSRGRGRRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDE 180
             RGGFG RGRGRRNQD SN+ NNDDKPASWS GSGNSGGW+S GG     AGSWNQGGDE
Sbjct: 1523 GRGGFGGRGRGRRNQDGSNESNNDDKPASWSAGSGNSGGWSSSGG-----AGSWNQGGDE 1582

Query: 181  KNQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGH 240
            KN+QQHSWKSSNDGGQGSGWKEPSG+DHNNW+SSGSSGAGNSSGWNNST  KE EESGG 
Sbjct: 1583 KNEQQHSWKSSNDGGQGSGWKEPSGNDHNNWKSSGSSGAGNSSGWNNSTAAKEMEESGGQ 1642

Query: 241  NSWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSAEPSTLDKEIAN 300
            NSW+Q+TKTDSQGGGWQKSASSWNAGTENQT TKDVSS SKDGGWGKS EPSTLDKE AN
Sbjct: 1643 NSWSQSTKTDSQGGGWQKSASSWNAGTENQTATKDVSSGSKDGGWGKSVEPSTLDKEKAN 1702

Query: 301  VGAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK 310
            VGAQGG A GWEKPTSSWNTEQSRGENNSGGG GGA GK
Sbjct: 1703 VGAQGG-AGGWEKPTSSWNTEQSRGENNSGGG-GGAWGK 1734

[Close]

BLAST of Cucsat.G15022 vs. ExPASy TrEMBL
Match: A0A1S3C5D0 (uncharacterized transmembrane protein DDB_G0289901-like OS=Cucumis melo OX=3656 GN=LOC103496642 PE=4 SV=1)

HSP 1 Score: 404 bits (1039), Expect = 3.77e-139
Identity = 239/293 (81.57%), Postives = 247/293 (84.30%), Query Frame = 0


Query: 42  RGRGRGRWNQEG-SYDGDNGGQRGGYGGRGRGRWNQENGSNEGGDNGG------------ 101
           RGRGRGRWNQEG SYDGDNGG+RGGYGGRGRGRWNQENGSNEGGDNGG            
Sbjct: 1   RGRGRGRWNQEGGSYDGDNGGRRGGYGGRGRGRWNQENGSNEGGDNGGRGGFGGRGRGRW 60

Query: 102 ---------WSGG--RGGFGSRGRGRRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGG 161
                    WSGG  RGGFG RGRGRRNQD SN+ NNDDKPASWS GSGNSGGW+S GG 
Sbjct: 61  NQDDGGSGGWSGGGGRGGFGGRGRGRRNQDGSNESNNDDKPASWSAGSGNSGGWSSSGG- 120

Query: 162 GGGGAGSWNQGGDEKNQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGNSSGWN 221
               AGSWNQGGDEKN+QQHSWKSSNDGGQGSGWKEPSG+DHNNW+SSGSSGAGNSSGWN
Sbjct: 121 ----AGSWNQGGDEKNEQQHSWKSSNDGGQGSGWKEPSGNDHNNWKSSGSSGAGNSSGWN 180

Query: 222 NSTTGKETEESGGHNSWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSKDGGWG 281
           NST  KE EESGG NSW+Q+TKTDSQGGGWQKSASSWNAGTENQT TKDVSS SKDGGWG
Sbjct: 181 NSTAAKEMEESGGQNSWSQSTKTDSQGGGWQKSASSWNAGTENQTATKDVSSGSKDGGWG 240

Query: 282 KSAEPSTLDKEIANVGAQGGGAAGWEKPTSSWNTEQSRGENNSGGGRGGARGK 310
           KS EPSTLDKE ANVGAQGG A GWEKPTSSWNTEQSRGENNSGGG GGA GK
Sbjct: 241 KSVEPSTLDKEKANVGAQGG-AGGWEKPTSSWNTEQSRGENNSGGG-GGAWGK 286

[Close]

BLAST of Cucsat.G15022 vs. ExPASy TrEMBL
Match: A0A0A0LN22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G325960 PE=4 SV=1)

HSP 1 Score: 340 bits (871), Expect = 3.68e-103
Identity = 232/358 (64.80%), Postives = 243/358 (67.88%), Query Frame = 0


Query: 39   GGFRGRG-RGRWNQEGSYD----GDNGGQRGGYGGRGRGRWNQENGSNEGGDNGGWSGGR 98
            GGFRGRG RGR+   G  D    G  G  RGG+GGRGRGRWN E GSN+G +N GWSGG 
Sbjct: 1116 GGFRGRGERGRFGGRGRSDRGGFGRGGSDRGGFGGRGRGRWNSEGGSNDG-ENKGWSGGG 1175

Query: 99   GG------FGSRGRGRRNQ------DSSND--------------------------GNND 158
            GG      +GS G G  N+      D SN+                          G++D
Sbjct: 1176 GGGSDNKGWGSGGGGSDNKGWSSGGDGSNNKGWSTGGEGSGNKGGGDNKGWGSGSGGSSD 1235

Query: 159  DKPAS-------------WSTGSGNSG-----------------------GWNSGGGGG- 218
            DK  S             W +G G S                        GW+SGG GG 
Sbjct: 1236 DKGWSGGGNGVGGGDNKGWGSGGGGSNDNKGWSGGDNKGWGSAGGSSDNKGWSSGGSGGD 1295

Query: 219  ------GGGAGSWNQGGDEKNQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGN 278
                  GG   SWNQGGDEKNQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGN
Sbjct: 1296 NKGWSSGGDGRSWNQGGDEKNQQQHSWKSSNDGGQGSGWKEPSGSDHNNWESSGSSGAGN 1355

Query: 279  SSGWNNSTTGKETEESGGHNSWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSK 310
            SSGWNNSTTGKETEESGGHNSWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSK
Sbjct: 1356 SSGWNNSTTGKETEESGGHNSWNQTTKTDSQGGGWQKSASSWNAGTENQTVTKDVSSVSK 1415

[Close]

BLAST of Cucsat.G15022 vs. ExPASy TrEMBL
Match: A0A6J1H340 (protein RNA-directed DNA methylation 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459247 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 1.60e-72
Identity = 204/383 (53.26%), Postives = 228/383 (59.53%), Query Frame = 0


Query: 1    GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDRSDRSG---GGFRGRGRGRWNQEG-SYD 60
            GGFGGRGRGRW+  SGSND ++   GWS GG   +RSG   GGFRGRGRGRWNQEG S D
Sbjct: 1204 GGFGGRGRGRWNRESGSNDGENR--GWSSGGGDRERSGSDRGGFRGRGRGRWNQEGGSRD 1263

Query: 61   GDNGGQ----RGGYGGRGRGRWNQENGSNEGGDN-------------------------- 120
            GDNGG     RGGYGGRGRGRWNQE GSN+GGD+                          
Sbjct: 1264 GDNGGGWSGGRGGYGGRGRGRWNQEGGSNDGGDSVGWGGGGNWGKSGSDRGGFGGGGSGK 1323

Query: 121  ------------GGWSGG-----------RGGFGSRGRGRRNQDSS-NDGNNDDKPASWS 180
                        GGWSGG           RGGFG RGRGRRNQD    D +N DKPASWS
Sbjct: 1324 WSQEGGSNNSDYGGWSGGGGGSWGKSGSDRGGFGGRGRGRRNQDGGLKDDDNVDKPASWS 1383

Query: 181  TGSGNSGGWNSGGGGGGGGAGSWNQGGDEKNQQQHSWKSSNDGGQGSGWKEPSGSDHNNW 240
            TGSGN+GGW SGGG     AGSWN GGD+KNQQQ SWKSSND G+GSGWK PSG+++ NW
Sbjct: 1384 TGSGNNGGWGSGGGT----AGSWNGGGDDKNQQQ-SWKSSNDAGEGSGWKAPSGNENINW 1443

Query: 241  ESSGSSGAGNSSGWNNSTTGKETEESGGH-NSWNQTTKTDS--QGGGWQKSASSWNAGTE 288
            ++SGSSG  ++SGWN ST  KE EESG   NS  +  K D   QGGGWQKSAS WN G +
Sbjct: 1444 KASGSSGVDDNSGWNKSTACKEIEESGDQKNSRGKAAKADIHIQGGGWQKSASGWNEGID 1503

[Close]

BLAST of Cucsat.G15022 vs. ExPASy TrEMBL
Match: A0A6J1JV02 (protein RNA-directed DNA methylation 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489134 PE=4 SV=1)

HSP 1 Score: 250 bits (638), Expect = 2.59e-71
Identity = 204/358 (56.98%), Postives = 225/358 (62.85%), Query Frame = 0


Query: 1    GGFGGRGRGRWSSGSGSNDSDSGSGGWSGGGDR----SDRSGGGFRGRGRGRWNQEG-SY 60
            GGFGGRGRGRWSSGSGS+D           GDR    SDR  GGFRGRGRGRWNQ+G S+
Sbjct: 1271 GGFGGRGRGRWSSGSGSHD-----------GDREKFGSDR--GGFRGRGRGRWNQDGGSH 1330

Query: 61   DGDNGGQRGG---YGGRGRGRWNQENGSNEGGDNGG--WSGGRGG------------FGS 120
            DGDNGG RGG   YGGRGRGRWNQE  SN+G DNGG  WS G GG            FG 
Sbjct: 1331 DGDNGGWRGGRGGYGGRGRGRWNQEGDSNDG-DNGGGGWSSGNGGSWGKSGSDIGGGFGG 1390

Query: 121  RGRGRRNQDSSNDGNNDDKPASWSTGSGNSGGWNSGGGGGGGGAGSWNQGGDEKNQQQHS 180
            RG G+ NQ+                GS N+GGW+SGGG     AGSWNQGGDEKNQ Q  
Sbjct: 1391 RGSGKWNQEG---------------GSNNNGGWSSGGG-----AGSWNQGGDEKNQAQ-G 1450

Query: 181  WKSSNDGG------QGSGWKEP-SGSDHNNWESSGSSGAGNSSGWNNSTTGKETEESGGH 240
            WK SNDGG      QGSGWKEP SG++ NNW+SSGSSGA ++SGWN STTGKE EES   
Sbjct: 1451 WKPSNDGGDKFGGQQGSGWKEPTSGNEPNNWKSSGSSGADHNSGWNKSTTGKEMEESDSQ 1510

Query: 241  -NSWNQTTKTDSQGGG-WQKSASSWNAGTENQTVTKDVSSVSKDGGWGKSA--------- 300
             NSW+Q TK D+QGGG WQK+AS WN  TENQTV  DV+  +KDGGWGK A         
Sbjct: 1511 KNSWSQATKVDAQGGGGWQKAASGWNGETENQTVKSDVNVSAKDGGWGKPASGWNEGSGN 1570

Query: 301  ---------------EPSTLDKEIANVGAQGGGAAGW-EKPTSSWNTEQSRGENNSGG 302
                           + ST +KE ANVGAQGGG  G  EKPTSSWN EQ +G    GG
Sbjct: 1571 QGNNNWKSSETSGEVQSSTWNKE-ANVGAQGGGEEGGSEKPTSSWNAEQPQGGGGGGG 1592

The following BLAST results are available for this feature:

BLAST of Cucsat.G15022 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G15022 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652013.1	2.19e-178	91.72	hypothetical protein Csa_006830 [Cucumis sativus]	[more]
XP_031736956.1	2.23e-178	91.72	protein RNA-directed DNA methylation 3 isoform X2 [Cucumis sativus]	[more]
XP_031736955.1	6.19e-178	91.72	protein RNA-directed DNA methylation 3 isoform X1 [Cucumis sativus]	[more]
TYJ99969.1	1.76e-143	81.71	protein RNA-directed DNA methylation 3 [Cucumis melo var. makuwa]	[more]
XP_008456802.1	7.78e-139	81.57	PREDICTED: uncharacterized transmembrane protein DDB_G0289901-like, partial [Cuc...	[more]

BLAST of Cucsat.G15022 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BLU8	8.52e-144	81.71	Protein RNA-directed DNA methylation 3 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C5D0	3.77e-139	81.57	uncharacterized transmembrane protein DDB_G0289901-like OS=Cucumis melo OX=3656 ...	[more]
A0A0A0LN22	3.68e-103	64.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G325960 PE=4 SV=1	[more]
A0A6J1H340	1.60e-72	53.26	protein RNA-directed DNA methylation 3-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JV02	2.59e-71	56.98	protein RNA-directed DNA methylation 3-like isoform X2 OS=Cucurbita maxima OX=36...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15022.T1	Cucsat.G15022.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032784	regulation of DNA-templated transcription, elongation
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus