Cucsat.G15013 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G15013
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Pectate lyase
Location	ctg191: 94709 .. 99314 (-)
RNA-Seq Expression	Cucsat.G15013
Synteny	Cucsat.G15013

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGTCTCATCTCAGCAAATAATTTTTAATACAGAGATATGGGAAGGAAGAAGAAGAATACTAACATTTCATATCCCTATAATAAATTTAGCCAACCAAAAAAAAAAAAAAACCAGATAGAAAAATGTAAGCAACAGTCTGCAAAAGGACACGCAAAAGAGAATAAAGAGAAGGGAAGGGAGAAAGAACCATTCCTCTTTCTCCTTCTCCTTCTCCTTCTCCTTCTCACATACCCTCTTTCAGACACAGTTGTCTTGCTCTCCATTCCTTCTTGATCCTCAAAAACCCTAACAACAAAGTAAAATAAAGCACTTTCCAGTTTCCTTCTTTACCCTTTTTGCCATTCCCCATGTTCTCTCTTTTTCCTATGTTGTTTTGCAGTTTCATTTATAGTTAACCAGATTTGTTCTTAGTTCATTTCAGAGGAAGGTACCTGAAAGAGAGTCTTCATTCTGAAAAAGACTCTTCTTTTTTTTTTTCTTCTTCTTCTACTTCTTCTCAAGCAGCTCCAAACAATGTTTGCTACTACTGGAGTTCTCTTCTTCATCTGGTTTCTGAGCTGCACTCTGCTTCCTCTTACCATGGCAACTTTCAACTTCAATCTCACTGTGCCAAATCTTCTACCAGATCCTGAGACTGTTGCTTATCAAGTTCAAAGGTAACAATTTCTTCATCCATTATCACATTTGACTCAATCTTGTTGGTTTCTCTGTTTGGAATCTTGGGTATCCACCATTTCCATTGTTCCTGGCTGTAAAAAGAGCACACCCCAAATGGGGTTCTGCACCTGAACTCTAGTTGACATTTTATCGAACAATTGGTGTGCATTACTGTGTTGCTCAAGCTGCTGCTCCCCTGTTTCTATGGCTTCCCCCGCATTAATACAAGGCTATCTCTCTTTCTTGCAGGAGTGTGAATGATTCCTTTTTCAGAAGACAAATGTTGTCCATTCATTCAAAAGGACAATCCAATTCCTGTCAAACTGCAAACCCTATCGACGATTGTTGGCGTTGTGACTCAAACTGGCAAGCTAATCGCCAACGACTCGCCGATTGCGGCATTGGATTCGGCCGAGATGCCATGGGAGGGAAAGGAGGTCAGATCTACGTAGTTACAGATTCCTCCGATCCCGACCCTGTAAACCCTCGACCTGGAACTCTCCGTTACGCCGTGGTTCAAGATGAACCTCTTTGGATCGTCTTTGCTGCAGATATGACAATCAAACTCAAATACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGAGGCGCCAATGTCCACATTACCGGCGGCGGTTGCATCACACTCCAATACATCTCGAATGTAATCATCCACAACATCAACATCCACCACTGTGTCCCTACCGGTCACACCAACATCCGATCGTCCCCTACGCATGTCGGATACAGAGGAAAGTCCGACGGCGATGGAATATCGATCTTTAGCTCACGCAACATCTGGATCGACCATTGTTCTCTCTCGTACTGTACCGATGGCTTAATCGACGCCATAATGGGATCGACGGGAATCACGATCTCGAACAACTACTTCTCCCACCACGATGAGGTGATGTTGTTAGGGCACGACGATGGGTTCACGCCGGATTCAGGGATGCAGGTGACAATAGCTTTTAATTTGTTCGGGGAGAAGCTGGTTCAGAGAATGCCGCGGTGCCGACGGGGATACATTCACGTTGTAAACAACGATTTCCAATCGTGGGAGATGTACGCCATCGGCGGGAGTGGTAATCCGACGATCAACAGCCAAGGGAATCGGTATATTGCTCCAGGAAATCCCAATGCGAAGGAGGTACGTTCATCTTACTCAGTTTATCCACTCCGTAATAAAGCTCACCGGCGCGTTTATGGGACGCTCCGCTGAGGCAATTAAGTTTAAAATAATTTTCTTTTAAATTACTTTTGGACTACAAATTGTTTTCAAATTTGGACAATGAAAATATTATAATGTGTGAAATAGTTGAGAGCTATTGTTGGAAAGTAAAAAAAAAAAAGAAAAGAAGAAGAAGTTGGAGAAAAGTTCAAAGGTTTAACCTTTTAATTGAAAAGGAAATACAATGGTTAAAAATGGTGATTTGATAATGATTAGATTTCTATTAATTTAAAAATTTTCACTCCAAGTTTTATAGTGATTTCCATCCATCCATTAACACATCTTCAAGAACAAAAGCACCTTTTTGAAAATTATTTTTCTTAGTGTTAAAATTTTAACTAATTCCTTCAGAATTGATTTTGACCTGACGAATTTTATGTTGAAAAAAAAGGGAATTTAAAAAAGTCACACACGTGTGAGAGAATTATTATGATTGGTTTTGAAGCAGTGAAAAAAACCTTGTCGTTTGGTATAGGTGACGAAGCGCGTGGACACGAACGCGGGAGATTGGTCGGAGTGGAACTGGAGGACGGAGGGGGACATAATGGTAAACGGAGCGTTTTTTGTGCCTTCCGGCGAAGGACTCAGCAATATGTACGTTAAAGCTTCCAGTTTGCCGCCCAAATCCGCCGCTCTTGTCGACCAGCTCACTCTCAACGCCGGCGTCTTCGGTGGCTCCAGGTACCCTTCTTTCTTTTTTTTATTCCTCCACTTACCAAAATGCTCTCATACTCCCTGTTTGATCAAATTTAAGTATACATAGATAATGATATATTTTAACAAAAAAGAATAGGTTAAATTGGAGTGGTAATTTGTGGGAAATGAGAAAGTAAACATAAGACCCATTGCTTTCTTTTTGTCCTCACACTAGACCTCTATTTGTTTCTCTTTTCTTTTCTTTTTGTCTTTTTGCCTCTTCTGTCCACTTGTGCACTGCGAAAATAAGACCCATTGCTTTCCATTACACATCAAAATCTTATTTAGATCCTTATTTATTCATTGGGAAAAGGTAAATTCTACTCGGGGTTATATACACATTCACTTCAAATCAAATGTATAATCACCATGATCACTCCTTTTCTTCTTCTAACCTATTGAATTTGTCCCTCTATATTGTTACGGAAATGATGAAGATATATAGCAAAAACATCATTATTATTTGTGATTATTGTATTTTAGCCATAAATAAGATAGCACCAATATTATGTTTAGAGCTTCGTGTACATCCGACACCCTAGAATGGTTAGTTATCTTAGCTTCTCAAGTAATTTCTACATTTTTTTTCTTGTTTGTTGGGTAACATTTAAGGATTAAAATATCGATATTGATGTCAATATCTAGATTTCAATTTTATGGATGTATCGATATCAAAAAAATATGTAAAGTCAGAAAATTTATTTAAATAAATAATTAAGTTGTTTTTTTTTTTTTTTTTTTTTCCAAAATTGAGTTATGAATATATTTATTAGTATTTGCATTCATACAAAATTAAATACATGATATATTGTCTTTTAGGAGCATTTATAAAGATGTGATATACTTGTAAATATTTAATATGTATATTGAACTCTTGGATTTAGGATACTTTAAAGGTGAGTAACATTAGCTCAATTAGAAGAGTAGAGTTGTCCTATGGACCAAAGGAAAAAATGAATTGTCTTTTTAAAATTGTAAACATAAAAAAGGGTAAAAAGGGCGAACATGTGTATGTACAGAGAAAATGAGCAGTTGAGGCAAGTGGGGGGTTTTTCTTCATTAAATTAATCAATGAATAGCAGTGGTGAAAAGTTGATCTCTTGGTTAGTAGTATGGTATAAGTAGTTTTGTACCTTTTCTATTTCCTTTTTCATATATATATATATATATATATATATATATATAAAGTTTTTGCTTTCCAGCTATGTCTTTTAGGTCCCACTTTCTTTCTCTATATTATTTGGAAATGGTGGACCCTACTTATCAGCTTCAATTTATAATCAAACTTATGACCTCTCACTCACCTACTTCTCTTTTCCCAAGTGGATCAAAGAAGAGAGACCACAGTTTTCAAACTTTTTTCTTTGTATGTTGAGTTCTATAAATGAATTTATTTCTATTAATGCTCATGATTTGATCTCATGATAATGTAAAATCGAGGCAATAAATTTCATTTCATGTTACGCATATTACTCGAACCCATCTGCTTAATCTTGTATATTATATTATGTTTTAAGTTTGTTTCATTTTCATTTGTGTAGGGAGAACAGACAGAGCACCTCGTACCCTGGAGACGAAGCCTCCTCCAGCAGCTCAGGATCCAGTGGCAGCGATGGTGGTGGTGACTACTTTGGGATGATATTCGGCGGGGGTGGGATAAACAATGCACCACCGCCATCTCTTTCAGCTGTTAACATGATCATTCTAACCCTATTTACTGTCTACGATGCCTTATTATTAACATTGTCATTGTAGTAATTGAAGAATTTCATTGAAAAAGAAAAGATAATATAAAACAAAAAAGAACAAACATCCATCTTTTCCAGATCTCTTTTCCCTTTCGCTACGTGCAGCAATATTTAATATAAGATAAAGTAAACTTCAAACATTGTAAAACATGGTAAGTCTTAAAGTGGGTGAAACATTGAAAAAATGGAATCTATTGAAACGACCCCATCTCTTGTCTATTATTACATACACAGCATGTGGAAAATGGATGTGAGGATGATTGTCTGTCTCCCCCAAAACAAGCAAAACACCGCCCTGCACTGTGCCACACCA

Coding sequence (CDS)

ATGTTTGCTACTACTGGAGTTCTCTTCTTCATCTGGTTTCTGAGCTGCACTCTGCTTCCTCTTACCATGGCAACTTTCAACTTCAATCTCACTGTGCCAAATCTTCTACCAGATCCTGAGACTGTTGCTTATCAAGTTCAAAGGAGTGTGAATGATTCCTTTTTCAGAAGACAAATGTTGTCCATTCATTCAAAAGGACAATCCAATTCCTGTCAAACTGCAAACCCTATCGACGATTGTTGGCGTTGTGACTCAAACTGGCAAGCTAATCGCCAACGACTCGCCGATTGCGGCATTGGATTCGGCCGAGATGCCATGGGAGGGAAAGGAGGTCAGATCTACGTAGTTACAGATTCCTCCGATCCCGACCCTGTAAACCCTCGACCTGGAACTCTCCGTTACGCCGTGGTTCAAGATGAACCTCTTTGGATCGTCTTTGCTGCAGATATGACAATCAAACTCAAATACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGAGGCGCCAATGTCCACATTACCGGCGGCGGTTGCATCACACTCCAATACATCTCGAATGTAATCATCCACAACATCAACATCCACCACTGTGTCCCTACCGGTCACACCAACATCCGATCGTCCCCTACGCATGTCGGATACAGAGGAAAGTCCGACGGCGATGGAATATCGATCTTTAGCTCACGCAACATCTGGATCGACCATTGTTCTCTCTCGTACTGTACCGATGGCTTAATCGACGCCATAATGGGATCGACGGGAATCACGATCTCGAACAACTACTTCTCCCACCACGATGAGGTGATGTTGTTAGGGCACGACGATGGGTTCACGCCGGATTCAGGGATGCAGGTGACAATAGCTTTTAATTTGTTCGGGGAGAAGCTGGTTCAGAGAATGCCGCGGTGCCGACGGGGATACATTCACGTTGTAAACAACGATTTCCAATCGTGGGAGATGTACGCCATCGGCGGGAGTGGTAATCCGACGATCAACAGCCAAGGGAATCGGTATATTGCTCCAGGAAATCCCAATGCGAAGGAGGTGACGAAGCGCGTGGACACGAACGCGGGAGATTGGTCGGAGTGGAACTGGAGGACGGAGGGGGACATAATGGTAAACGGAGCGTTTTTTGTGCCTTCCGGCGAAGGACTCAGCAATATGTACGTTAAAGCTTCCAGTTTGCCGCCCAAATCCGCCGCTCTTGTCGACCAGCTCACTCTCAACGCCGGCGTCTTCGGTGGCTCCAGGGAGAACAGACAGAGCACCTCGTACCCTGGAGACGAAGCCTCCTCCAGCAGCTCAGGATCCAGTGGCAGCGATGGTGGTGGTGACTACTTTGGGATGATATTCGGCGGGGGTGGGATAAACAATGCACCACCGCCATCTCTTTCAGCTGTTAACATGATCATTCTAACCCTATTTACTGTCTACGATGCCTTATTATTAACATTGTCATTGTAG

Protein sequence

MFATTGVLFFIWFLSCTLLPLTMATFNFNLTVPNLLPDPETVAYQVQRSVNDSFFRRQMLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRENRQSTSYPGDEASSSSSGSSGSDGGGDYFGMIFGGGGINNAPPPSLSAVNMIILTLFTVYDALLLTLSL

Homology

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BLAST of Cucsat.G15013 vs. ExPASy Swiss-Prot
Match: Q9SCP2 (Probable pectate lyase 12 OS=Arabidopsis thaliana OX=3702 GN=At3g53190 PE=2 SV=2)

HSP 1 Score: 492.3 bits (1266), Expect = 4.2e-138
Identity = 226/284 (79.58%), Postives = 249/284 (87.68%), Query Frame = 0


Query: 10  SNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDPDPVNP 69
           S  C T NPIDDCW+CD NW  NRQ LADCGIGFG+ A+GGKGGQ Y VTDSSD D VNP
Sbjct: 67  STPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAVNP 126

Query: 70  RPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYIS 129
           +PGTLRY V+Q+EPLWIVF ++M IKLK EL+ NSYKTLDGRGANVHI GGGCITLQY+S
Sbjct: 127 KPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYVS 186

Query: 130 NVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGL 189
           N+IIHNI+IHHC  +G+TN+RSSPTH G+R KSDGDGISIF S++IWIDHCSLS C DGL
Sbjct: 187 NIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKDGL 246

Query: 190 IDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQRMPRCRR 249
           IDA+MGSTGITISNN+FSHH+EVMLLGH D + PDSGMQVTIAFN FGEKL+QRMPRCRR
Sbjct: 247 IDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMPRCRR 306

Query: 250 GYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 294
           GYIHVVNNDF  WEMYAIGGSGNPTINSQGNRY AP NP AKEV
Sbjct: 307 GYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEV 350

[Close]

BLAST of Cucsat.G15013 vs. ExPASy Swiss-Prot
Match: Q93Z04 (Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 3.4e-124
Identity = 205/292 (70.21%), Postives = 242/292 (82.88%), Query Frame = 0


Query: 3   SIHSKGQSNSCQTANPIDDCWRC-DSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDS 62
           S  S   S+SC+T NPIDDCWRC D++W  NRQRLADC IGFG   +GGK G+IYVVTDS
Sbjct: 65  SSSSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDS 124

Query: 63  SDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGG 122
           SD +P NP PGTLRY V+Q+EPLWIVF+++M I+LK EL++NSYKTLDGRG+ VHITG G
Sbjct: 125 SDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNG 184

Query: 123 CITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCS 182
           C+TLQY+ ++IIHN++I+ C P+              RG+SDGDGISIF S+ IW+DHCS
Sbjct: 185 CLTLQYVQHIIIHNLHIYDCKPSAGFE---------KRGRSDGDGISIFGSQKIWVDHCS 244

Query: 183 LSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLV 242
           +S+CTDGLIDA+MGST ITISNNYF+HHDEVMLLGHDD + PD+GMQVTIAFN FG+ LV
Sbjct: 245 MSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLV 304

Query: 243 QRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 294
           QRMPRCRRGYIHVVNNDF  W+MYAIGGSGNPTINSQGNRY AP +P+AKEV
Sbjct: 305 QRMPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEV 347

[Close]

BLAST of Cucsat.G15013 vs. ExPASy Swiss-Prot
Match: Q93Z25 (Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 4.9e-123
Identity = 197/282 (69.86%), Postives = 236/282 (83.69%), Query Frame = 0


Query: 12  SCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDPDPVNPRP 71
           SC + NPIDDCWRCD +W+ NR+RLADCGIGFG++A+GG+ G+IYVVTD  + DPVNPRP
Sbjct: 77  SCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRP 136

Query: 72  GTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNV 131
           GTLRYAV+QDEPLWI+F  DMTI+LK EL+MNS+KTLDGRGA+VHI+GG CIT+QY++N+
Sbjct: 137 GTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNI 196

Query: 132 IIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLID 191
           IIH ++IH C   G+T +R SP H GYR  SDGDG+SIF   ++W+DHCSLS C DGLID
Sbjct: 197 IIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLID 256

Query: 192 AIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQRMPRCRRGY 251
           AI GST ITISNNY +HH++VMLLGH D +  D  MQVTIAFN FGE LVQRMPRCR GY
Sbjct: 257 AIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGY 316

Query: 252 IHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 294
            HVVNND+  WEMYAIGGS NPTINSQGNR++AP + ++KEV
Sbjct: 317 FHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEV 358

[Close]

BLAST of Cucsat.G15013 vs. ExPASy Swiss-Prot
Match: Q940Q1 (Probable pectate lyase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g04680 PE=2 SV=2)

HSP 1 Score: 436.4 bits (1121), Expect = 2.7e-121
Identity = 195/282 (69.15%), Postives = 232/282 (82.27%), Query Frame = 0


Query: 12  SCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDPDPVNPRP 71
           +C T NPIDDCWRCD NW  NR+RLADCGIGFGR+A+GG+ G+ YVVTD  D +PVNPRP
Sbjct: 76  TCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRP 135

Query: 72  GTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQYISNV 131
           GTLR+AV+QD PLWIVF  DM I+LK EL++NS+KT+DGRGANVHI  GGCIT+Q+++NV
Sbjct: 136 GTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNV 195

Query: 132 IIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLID 191
           I+H ++IH C PTG+  +RSS TH G+R  +DGD ISIF S ++WIDH SLS+C DGL+D
Sbjct: 196 IVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVD 255

Query: 192 AIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQRMPRCRRGY 251
           A+MGST ITISNN+ +HH+EVMLLGH D +  D  MQVTIA+N FG  L+QRMPRCR GY
Sbjct: 256 AVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGY 315

Query: 252 IHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 294
            HVVNND+  WEMYAIGGS NPTINSQGNRY AP NP AKEV
Sbjct: 316 FHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEV 357

[Close]

BLAST of Cucsat.G15013 vs. ExPASy Swiss-Prot
Match: Q9SVQ6 (Putative pectate lyase 14 OS=Arabidopsis thaliana OX=3702 GN=At4g13210 PE=3 SV=2)

HSP 1 Score: 434.5 bits (1116), Expect = 1.0e-120
Identity = 198/286 (69.23%), Postives = 230/286 (80.42%), Query Frame = 0


Query: 8   GQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDPDPV 67
           G  +SC T NPIDDCWRCD  W   R+RLADC IGFGR+A+GG+ G+ Y+VTD SD DPV
Sbjct: 81  GFFSSCSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPV 140

Query: 68  NPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCITLQY 127
            P+PGTLRYAV+QDEPLWIVF  DM I L  EL+MNS+KT+DGRG NVHI GG C+T+QY
Sbjct: 141 TPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQY 200

Query: 128 ISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTD 187
           ++N+IIH INIH C  TG+  +RSS +H G+R  +DGDGISIF S +IWIDH SLS C D
Sbjct: 201 VTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCAD 260

Query: 188 GLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQRMPRC 247
           GLIDAIMGST ITISNNY +HH+E +LLGH D +T D  MQVTIA+N FGE L+QRMPRC
Sbjct: 261 GLIDAIMGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRC 320

Query: 248 RRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 294
           R GY HVVNND+  WEMYAIGGS NPTINSQGNR++APGN  AKEV
Sbjct: 321 RHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNRFAKEV 366

[Close]

BLAST of Cucsat.G15013 vs. NCBI nr
Match: XP_004150371.1 (probable pectate lyase 12 [Cucumis sativus] >KGN62193.1 hypothetical protein Csa_006834 [Cucumis sativus])

HSP 1 Score: 619 bits (1596), Expect = 1.39e-220
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 60
           MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD
Sbjct: 59  MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 118

Query: 61  SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 120
           SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG
Sbjct: 119 SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 178

Query: 121 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 180
           GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC
Sbjct: 179 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 238

Query: 181 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 240
           SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL
Sbjct: 239 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 298

Query: 241 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 293
           VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV
Sbjct: 299 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 351

[Close]

BLAST of Cucsat.G15013 vs. NCBI nr
Match: XP_008456538.1 (PREDICTED: probable pectate lyase 12 [Cucumis melo] >TYJ99968.1 putative pectate lyase 12 [Cucumis melo var. makuwa])

HSP 1 Score: 613 bits (1582), Expect = 2.33e-218
Identity = 289/293 (98.63%), Postives = 292/293 (99.66%), Query Frame = 0


Query: 1   MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 60
           MLS+HSKGQS+SCQT NPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD
Sbjct: 59  MLSVHSKGQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 118

Query: 61  SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 120
           SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG
Sbjct: 119 SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 178

Query: 121 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 180
           GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC
Sbjct: 179 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 238

Query: 181 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 240
           SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL
Sbjct: 239 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 298

Query: 241 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 293
           VQRMPRCRRGYIHVVNNDF+SWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV
Sbjct: 299 VQRMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 351

[Close]

BLAST of Cucsat.G15013 vs. NCBI nr
Match: XP_038884299.1 (probable pectate lyase 12 [Benincasa hispida])

HSP 1 Score: 606 bits (1563), Expect = 2.01e-215
Identity = 285/293 (97.27%), Postives = 289/293 (98.63%), Query Frame = 0


Query: 1   MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 60
           MLSIHSKGQSNSCQT NPIDDCWRCDSNWQANRQRLADCGIGFGR AMGGKGGQIY+VTD
Sbjct: 59  MLSIHSKGQSNSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRAAMGGKGGQIYIVTD 118

Query: 61  SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 120
           SSD DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG
Sbjct: 119 SSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 178

Query: 121 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 180
           GCITLQYISN+IIHNINIHHCVPTGHTNIRSSPTH+GYRGKSDGDGISIFSSRNIWIDHC
Sbjct: 179 GCITLQYISNIIIHNINIHHCVPTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHC 238

Query: 181 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 240
           SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDS MQVTIAFNLFGEKL
Sbjct: 239 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSAMQVTIAFNLFGEKL 298

Query: 241 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 293
           VQRMPRCRRGYIHVVNNDF+SWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV
Sbjct: 299 VQRMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 351

[Close]

BLAST of Cucsat.G15013 vs. NCBI nr
Match: XP_023524526.1 (probable pectate lyase 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 598 bits (1542), Expect = 2.73e-212
Identity = 280/293 (95.56%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 60
           MLSIHSKGQSNSCQT NPIDDCWRC SNWQANRQRLADC IGFGR+AMGGKGGQIY+VTD
Sbjct: 57  MLSIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTD 116

Query: 61  SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 120
           SSD DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG
Sbjct: 117 SSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 176

Query: 121 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 180
           GCITLQYISNVIIHNINIHHC+PTGHTN+RSSPTHVGYRGKSDGDGISIFSSRNIWIDHC
Sbjct: 177 GCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 236

Query: 181 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 240
           SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DG+TPDSGMQVTIAFNLFGEKL
Sbjct: 237 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKL 296

Query: 241 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 293
           VQRMPRCRRGYIHVVNN+F+SWEMYAIGGSG PTINSQGNRYIAPGNPNAKEV
Sbjct: 297 VQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEV 349

[Close]

BLAST of Cucsat.G15013 vs. NCBI nr
Match: XP_022990332.1 (probable pectate lyase 12 [Cucurbita maxima])

HSP 1 Score: 598 bits (1542), Expect = 2.73e-212
Identity = 280/293 (95.56%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 60
           MLSIHSKGQSNSCQT NPIDDCWRC SNWQANRQRLADC IGFGR+AMGGKGGQIY+VTD
Sbjct: 57  MLSIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTD 116

Query: 61  SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 120
           SSD DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG
Sbjct: 117 SSDTDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 176

Query: 121 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 180
           GCITLQYISNVIIHNINIHHC+PTGHTN+RSSPTHVGYRGKSDGDGISIFSSRNIWIDHC
Sbjct: 177 GCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 236

Query: 181 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 240
           SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DG+TPDSGMQVTIAFNLFGEKL
Sbjct: 237 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKL 296

Query: 241 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 293
           VQRMPRCRRGYIHVVNN+F+SWEMYAIGGSG PTINSQGNRYIAPGNPNAKEV
Sbjct: 297 VQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEV 349

[Close]

BLAST of Cucsat.G15013 vs. ExPASy TrEMBL
Match: A0A0A0LK67 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_2G326460 PE=3 SV=1)

HSP 1 Score: 619 bits (1596), Expect = 6.73e-221
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 60
           MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD
Sbjct: 59  MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 118

Query: 61  SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 120
           SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG
Sbjct: 119 SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 178

Query: 121 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 180
           GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC
Sbjct: 179 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 238

Query: 181 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 240
           SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL
Sbjct: 239 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 298

Query: 241 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 293
           VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV
Sbjct: 299 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 351

[Close]

BLAST of Cucsat.G15013 vs. ExPASy TrEMBL
Match: A0A5D3BPB8 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00090 PE=3 SV=1)

HSP 1 Score: 613 bits (1582), Expect = 1.13e-218
Identity = 289/293 (98.63%), Postives = 292/293 (99.66%), Query Frame = 0


Query: 1   MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 60
           MLS+HSKGQS+SCQT NPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD
Sbjct: 59  MLSVHSKGQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 118

Query: 61  SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 120
           SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG
Sbjct: 119 SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 178

Query: 121 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 180
           GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC
Sbjct: 179 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 238

Query: 181 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 240
           SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL
Sbjct: 239 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 298

Query: 241 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 293
           VQRMPRCRRGYIHVVNNDF+SWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV
Sbjct: 299 VQRMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 351

[Close]

BLAST of Cucsat.G15013 vs. ExPASy TrEMBL
Match: A0A1S3C4R4 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103496461 PE=3 SV=1)

HSP 1 Score: 613 bits (1582), Expect = 1.13e-218
Identity = 289/293 (98.63%), Postives = 292/293 (99.66%), Query Frame = 0


Query: 1   MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 60
           MLS+HSKGQS+SCQT NPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD
Sbjct: 59  MLSVHSKGQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 118

Query: 61  SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 120
           SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG
Sbjct: 119 SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 178

Query: 121 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 180
           GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC
Sbjct: 179 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 238

Query: 181 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 240
           SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL
Sbjct: 239 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 298

Query: 241 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 293
           VQRMPRCRRGYIHVVNNDF+SWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV
Sbjct: 299 VQRMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 351

[Close]

BLAST of Cucsat.G15013 vs. ExPASy TrEMBL
Match: A0A6J1JIE0 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111487228 PE=3 SV=1)

HSP 1 Score: 598 bits (1542), Expect = 1.32e-212
Identity = 280/293 (95.56%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 60
           MLSIHSKGQSNSCQT NPIDDCWRC SNWQANRQRLADC IGFGR+AMGGKGGQIY+VTD
Sbjct: 57  MLSIHSKGQSNSCQTGNPIDDCWRCGSNWQANRQRLADCSIGFGRNAMGGKGGQIYIVTD 116

Query: 61  SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 120
           SSD DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG
Sbjct: 117 SSDTDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 176

Query: 121 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 180
           GCITLQYISNVIIHNINIHHC+PTGHTN+RSSPTHVGYRGKSDGDGISIFSSRNIWIDHC
Sbjct: 177 GCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 236

Query: 181 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 240
           SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DG+TPDSGMQVTIAFNLFGEKL
Sbjct: 237 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKL 296

Query: 241 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 293
           VQRMPRCRRGYIHVVNN+F+SWEMYAIGGSG PTINSQGNRYIAPGNPNAKEV
Sbjct: 297 VQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEV 349

[Close]

BLAST of Cucsat.G15013 vs. ExPASy TrEMBL
Match: A0A6J1H1R2 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111459254 PE=3 SV=1)

HSP 1 Score: 596 bits (1536), Expect = 1.08e-211
Identity = 279/293 (95.22%), Postives = 287/293 (97.95%), Query Frame = 0


Query: 1   MLSIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 60
           MLSIHSKGQSNSCQT NPIDDCWRC SNWQ NRQRLADC IGFGR+AMGGKGGQIY+VTD
Sbjct: 57  MLSIHSKGQSNSCQTGNPIDDCWRCGSNWQDNRQRLADCSIGFGRNAMGGKGGQIYIVTD 116

Query: 61  SSDPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 120
           SSD DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG
Sbjct: 117 SSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 176

Query: 121 GCITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 180
           GCITLQYISNVIIHNINIHHC+PTGHTN+RSSPTHVGYRGKSDGDGISIFSSRNIWIDHC
Sbjct: 177 GCITLQYISNVIIHNINIHHCIPTGHTNVRSSPTHVGYRGKSDGDGISIFSSRNIWIDHC 236

Query: 181 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKL 240
           SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGH+DG+TPDSGMQVTIAFNLFGEKL
Sbjct: 237 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHEDGYTPDSGMQVTIAFNLFGEKL 296

Query: 241 VQRMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEV 293
           VQRMPRCRRGYIHVVNN+F+SWEMYAIGGSG PTINSQGNRYIAPGNPNAKEV
Sbjct: 297 VQRMPRCRRGYIHVVNNEFRSWEMYAIGGSGGPTINSQGNRYIAPGNPNAKEV 349

The following BLAST results are available for this feature:

BLAST of Cucsat.G15013 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCP2	4.2e-138	79.58	Probable pectate lyase 12 OS=Arabidopsis thaliana OX=3702 GN=At3g53190 PE=2 SV=2	[more]
Q93Z04	3.4e-124	70.21	Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1	[more]
Q93Z25	4.9e-123	69.86	Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1	[more]
Q940Q1	2.7e-121	69.15	Probable pectate lyase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g04680 PE=2 SV=2	[more]
Q9SVQ6	1.0e-120	69.23	Putative pectate lyase 14 OS=Arabidopsis thaliana OX=3702 GN=At4g13210 PE=3 SV=2	[more]

BLAST of Cucsat.G15013 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150371.1	1.39e-220	100.00	probable pectate lyase 12 [Cucumis sativus] >KGN62193.1 hypothetical protein Csa...	[more]
XP_008456538.1	2.33e-218	98.63	PREDICTED: probable pectate lyase 12 [Cucumis melo] >TYJ99968.1 putative pectate...	[more]
XP_038884299.1	2.01e-215	97.27	probable pectate lyase 12 [Benincasa hispida]	[more]
XP_023524526.1	2.73e-212	95.56	probable pectate lyase 12 [Cucurbita pepo subsp. pepo]	[more]
XP_022990332.1	2.73e-212	95.56	probable pectate lyase 12 [Cucurbita maxima]	[more]

BLAST of Cucsat.G15013 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK67	6.73e-221	100.00	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_2G326460 PE=3 SV=1	[more]
A0A5D3BPB8	1.13e-218	98.63	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00090 ...	[more]
A0A1S3C4R4	1.13e-218	98.63	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103496461 PE=3 SV=1	[more]
A0A6J1JIE0	1.32e-212	95.56	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111487228 PE=3 SV=1	[more]
A0A6J1H1R2	1.08e-211	95.22	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111459254 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 221..242 score: 65.15 coord: 301..320 score: 65.48 coord: 323..342 score: 75.24 coord: 121..146 score: 63.74 coord: 97..114 score: 57.41 coord: 157..173 score: 67.79
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 149..346 e-value: 4.3E-91 score: 318.6
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 157..338 e-value: 1.2E-22 score: 80.5
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 74..369 e-value: 6.9E-105 score: 352.8
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 5..352
None	No IPR available	PANTHER	PTHR31683:SF122	PECTATE LYASE	coord: 5..352
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 69..356

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G15013.T1	Cucsat.G15013.T1	mRNA
Cucsat.G15013.T4	Cucsat.G15013.T4	mRNA
Cucsat.G15013.T3	Cucsat.G15013.T3	mRNA
Cucsat.G15013.T6	Cucsat.G15013.T6	mRNA
Cucsat.G15013.T2	Cucsat.G15013.T2	mRNA
Cucsat.G15013.T5	Cucsat.G15013.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity