Cucsat.G1363 (gene) Cucumber (B10) v3

Overview
NameCucsat.G1363
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionMADS-box transcription factor 17-like
Locationctg1: 12342092 .. 12346860 (+)
RNA-Seq ExpressionCucsat.G1363
SyntenyCucsat.G1363
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAATGGGAAAGGGAAAGGGAAAGGGAAAGGGAAAGAGAGAGTTTTGGAGAGTAACAAAGATAAAAGTTGGAAAGGGACAAGCTAAGGTAAGGGAGAGGAACTATAAAAACCAACAAGAGCACTTCCACACACTTTGTTGAACATATATAATATGTGGTTTTAGCTTTAGTTTGAGAGATCAGAGAAGAAGGAGGAGGAGGAATTAGATCATAATATCATAATGGGAAGGGGAAAAGTAGTGCTTGAAAGAATAGAGAACAGAGTGAATCGTCAAGTGACCTTCTCAAAGAGAAGAAATGGGTTATTGAAGAAGGCTTCTGAACTCTCTGTGCTTTGTGATGTTGATGTTGCTCTCATCATCTTCTCTACTCGTGGAAAGCTCTTTGAATTTGGCAGCACTGAGTAAATTAAAATACTACACTATTTTTCATTCCTTCTTCTTCTTCTTCTTCTTCTTCTAATTTCTTTTATTTATGGCAATTTATCATCACTTTCATTCATCAATAATCAGCATGAACAAAATCCTTGAGAGGTATCACCAGCAATGTTACACCTCTGGATCAACCACCAATCTTGACGAGAGTGACGTACAGGTGAACAATTAGGAGATCCAAACTATTTATGTATTATTTACTGAGTTATCTTCAGATTGACTAGTAAGATATAGGGTTAATTGGTTCAAAATAAATATTTTCTTTTTATTTTTTGGAATTTGTTGGTGATGATATGATGATATACATGTTGGGAATGCAGATAGAGGAGGTGTCAAAGCTGAGAGCTAAATATGAATCTCTTCAACGCTCCCATAGGTTAATTTAATTAGATTAGTTAAATGAAGACCTTGTTTTTTTAAAAAATGATCTTGATGTGTGGTTTAATTTTGTATGAATTTTGAAGGAATTTTCTTGGAGAAGAACTTGAACCATTGACCTTAAAAGAGTTGCATAATCTTGAGAAACAGTTGGACAAAACTCTTTCACAAGCTAGACAGCGAAAGGTAATTCAAGATAAGGATTGGTTTTTTCTATTTTCGTTTAATTTTATTCTTTTTATTAGGTTGGAATCGCTAAATTCATAACATTAATAAGGATGATTTCTCTATGAATAGTGATTTCTTCCCATTAGATCAATTTTTTTTTATCTTTTATCTTTTTCTTTTTGGATTTGGTCCTACCCAAAATTATTTTGATATATCCTGTCATATTTCTGAGTTTACACTCAATATAGCTCAATTTTGTAAATTTCTTGATTATAAAATGAGTTACTAAAAGAATATGGGACGAGTTTCTTTAATTGTTTAGAGTTTATGATTATTTTATGATCTACTTTTTAATATAGATGAAAATGTTTTTCATTGTCAACAACAGTGTGTAGAATTGAATAAAATTCAAAAAGTTATGTTTTTGTTTTGATACTGATTTAACTAAAGCATATCTGAAAGTTCTTCCATTAATACTTTGTGTGTGTGGTGTTATTTTCAAACAATTTCTTACTATTACGAAGAGAAACTATAATATTTGAAAAGAATTCATATTATATCAAATGATTTATTAATTTTTTTTAAGAATAAAATACATATAAATACAATGGGTGTACTAAGATTTTTCAATTAGGTTCACACACTTTGCATCTTTAGCACCATCATAAATGGTTATTAATTTTATTTTAAAAAGGTTTGAACTTCTAAGCTTTTTGGTTATGAGAACATATAGTTTATCCAAATCTCCTTTACTTTACTATTTGTAGCAAGAAATTTTGTTAGGTCTATATAAGTTGTTTTAAATCACTACTAAATCCCATTGCTCAACATATGGTATTTGAATATAGAGAATGAAATAATGATACAGACGCACTATAAAAAGGTTGGTATGAAGATTTGTGATCATATACTCTAATATTACATTAAATTGCCACGAAGATGTGACATAAAGATGATTAAACCTTGTAGATTAGGATACTAAATGGTAGTGATCATGATAGTAACCAAACATAGAAACCGAATACAAACTGGGGTATCTTGATGAGATAAAATGGCCGTGGCATTCCATTATTAAATGAATTCAATTAAAAATTAATCGTAAGATTGATTGTGACTAATGTAGTCTCTATTTTAATAATATATCTATCAAAATCAATTTCATGAAGTTTGATTGTGGGTTAATAATAGACATTGATATGATATGTTTTTGTTTATGTTCCTAATTGCAGGCTGAAATAATGCTTCAAAAATTAGCAGACTTGCGCAAAATGGTAAGAAAAATCAATTTTAATTTAGAGGAATTATCATAAATATCAAAAATTAGAAACTATTTGCAAGTTGTCCCTTTAATCATGGACAAAATATGATATCCAACCCTAATTATCATTATTTTCTTTTTGTCATTCATGAAACAGAAATAATGATAATGTAAAGAAATGTCCATCTAGTGGAGATGTCGTAGTGTACCTATTAATCATGATCCTTCTGTATATTTTTTTAAAAGATATTCAATCCTAATTAGTATATACATACTAACATATCAAAGTTCCTTCTTATTCTATATTATATGCTTTTCTTTCTGTTTTTTTTAAAAAGATAGTTACTTCTTATTATATATGTTTTTTCAAACTAATTTAGATGTATTTGATATATATGTATGGCATTTTTAAATATAGTATAAAATATTTACAAACTATAGTAAAATTTTGGATTATATCAATGATAGAAACTGATAAACTTCTTTCGTTATCTATCAATGTCACTAATGGAAAAGGATATCAATGTCTATTATTGATAGAATTTAAAATTTTGCTATATGTTGTAAATATTTTGTCAAATTTGTTATTCTTGATAATTTTTTTATTATATTAATATTTCTTTGTTTTCTTTCAAAATTCAAAATATTAAAATAATTTTTTACACGAAAAATTTATTTAAAGTTAAATAGTTAAAATCTATATGTTACCTTATTTGTTATTATATATAGTTATTATTGTTTGGAACTATGATCAATCTCATAAAGTATAAAGAAAACTATGTTGAAAGAAAAAAGTTAGAAATAAGAGTCTACAATTTTGGTGTTTTCAAGTGCTTTTGTATTGTACCTTTTTCAAAAAACTTATAATTATATGGAAATGTTTCTTGACAAAAGAAAATATGTTCTCAACACAAGAACTAAATCTGACAACTTTTTCTATTTAATTATTTTACAATAAAATTGTCAGACACTGTTGTATTGATCGATTATGGAAGAAAAAAAATGACAGAATAAATTATATTCACATCGAATAACAATTCGTTCCTTGATTATTATGCAATAGTGGACATATATATTTCTGGAAATTCAATAACAATGTTGGGAATCCCCTTGTTGCATTATTGCAATACTACTCTTTGTTTTGCATTGATTGTCGCTTAATAATAGCATTGAGTGTTATAGATGATCTGTCAATCTAGTTGACATATTTGGATGTATATTTATTAATTCCTCTATCATTTAGCATCTTGAAAAAATAATAGCATGATCTACCGTATTATGTTGCAGTGTTAAACCTAAAATTAATATATAATAATGCTCCATATAAAATATTTTAAGTTTGATAAAAGGGTAAGTCATAAGTAAATAACCTTAAGTTTGAATAAACTTATGAATTGATAAAAATAATAGTGTGGTGTGATTCAATTGAAAATGAAACTAAAGAGGAAGTTTATATGTGTTTATTGTTTATTTGTGTGAGTAAATAAGTGACAAGCATTAGTTTTTTTGAGATATACAGGAGCAGGATCTTGGAGATCAAAATACTCAGCTCAAGTCAAAGGTTCTTCTCTCTTTCTTCTTTTTTTTTTTCCTCTTTAAAGAAGATGGAGAAATATCTGTTCAACGACTTATTTTGTGTGCAATTTTAACATAATAAAATACCTTTGAAGTTCCATTCTTTCTTAGCTATATATGATTTCTGTAATTACCATCTTGATTTATTATATAAACTCTCTAACTATATCTTTAAGCCGTCCTTGATATTTTCTCTGATCTTTCTATTAGTCTGCAAACACAGCTAGTATTACTGTTAGTAAAATGCATAAATATTTGTGTCGATTGTTCTGCTGTTTCTGTGTATTTGCTTCTTTTTTTTTTTTTTTTTTTGTCCGCTTTATAACATTTTTTAAATTCACGAATATAGTAGAATATAAAACCAAAACAAAAGTTCTTTGCATGCAACACAGCTCGAAAAAGATCAGGAACAGGAAGGTGGTGAGGAAGATCCAAAGAATTACGAAGTTGTGAGAGCTGACGACCCAAACATGATCAACACCACCAGGTATTATGCATATTCAAACCAAATATTTAAGTTACTATATAATCTGAGAAGTGTTAATTGTGGTTACTAATAAGGTAGGCGTAGCCAAAATGATTAGTTTTGGGTTTGGTCTGTTTGAGTTTTAATGAACAGCAATAATAATAATAAAAGAAAAAACACACAGGTATTATGAAGCCCAAGAAGAAGAAGAAGAGTGCAGGGGGGTGATAGACGGTGGGAGTAACTTAATCCCAGATTGGCTACTTTGATAGATCTCACTAATTATATATCTATATGGAATATGCTCGGATCCCCCCTAATTTTTATTTTCTATTATTCTTGACAAATAAAGTAATTAGGATCATGATGCATGGGGGAACCTTGGACGTTAAATTATATCCTATATAGAAACCTTTCTGTTATTTAATAAATATGTCTCTTTGTTTTAAATTTTTTACCAATAATTCAGGGCTAATTTTATATGTAATAT

Coding sequence (CDS)

ATGGGAAGGGGAAAAGTAGTGCTTGAAAGAATAGAGAACAGAGTGAATCGTCAAGTGACCTTCTCAAAGAGAAGAAATGGGTTATTGAAGAAGGCTTCTGAACTCTCTGTGCTTTGTGATGTTGATGTTGCTCTCATCATCTTCTCTACTCGTGGAAAGCTCTTTGAATTTGGCAGCACTGACATGAACAAAATCCTTGAGAGGTATCACCAGCAATGTTACACCTCTGGATCAACCACCAATCTTGACGAGAGTGACGTACAGATAGAGGAGGTGTCAAAGCTGAGAGCTAAATATGAATCTCTTCAACGCTCCCATAGGTTAATTTAA

Protein sequence

MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGSTDMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHRLI
Homology
[Close]
BLAST of Cucsat.G1363 vs. ExPASy Swiss-Prot
Match: Q8LLR1 (Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-32
Identity = 72/107 (67.29%), Postives = 84/107 (78.50%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V L+RIEN++NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKL+EFGS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 108
              K LERY + CYT        E+    +EVSKL+AKYESLQR+ R
Sbjct: 61  GTTKTLERYQRVCYTPQDNNMECETQSWYQEVSKLKAKYESLQRTQR 107

[Close]
BLAST of Cucsat.G1363 vs. ExPASy Swiss-Prot
Match: Q6EU39 (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS6 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-31
Identity = 70/108 (64.81%), Postives = 86/108 (79.63%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V L+RIEN++NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKL+EFGS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMNKILERYHQQCYTSGSTTN-LDESDVQIEEVSKLRAKYESLQRSHR 108
            + K LERY   CY +  + N L E+     E+SKL+AK+E+LQR+ R
Sbjct: 61  GITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQR 108

[Close]
BLAST of Cucsat.G1363 vs. ExPASy Swiss-Prot
Match: Q7XUN2 (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS17 PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 1.4e-29
Identity = 70/110 (63.64%), Postives = 87/110 (79.09%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V L+RIEN++NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKL+EFGS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60

Query: 61  DMNKILERYHQQCYTS-GSTTNLDESDVQ--IEEVSKLRAKYESLQRSHR 108
            +NK LE+Y+  CY + GS + L   + Q   +E+S+L+ K E LQRS R
Sbjct: 61  GINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQR 110

[Close]
BLAST of Cucsat.G1363 vs. ExPASy Swiss-Prot
Match: P29386 (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-29
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V ++RIEN++NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKL+EFGS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQ--IEEVSKLRAKYESLQRSHR 108
            +   +ERY+ +CY    + N  E   Q   +EV+KL++KYESL R++R
Sbjct: 61  GIESTIERYN-RCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNR 108

[Close]
BLAST of Cucsat.G1363 vs. ExPASy Swiss-Prot
Match: Q39685 (MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 6.0e-28
Identity = 69/109 (63.30%), Postives = 84/109 (77.06%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V L+RIEN++NRQVTF+KRRNGLLKKA ELSVLCD +VALI+FS RGKL+EF ST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60

Query: 61  D-MNKILERYHQQCYTSGSTTN-LDESDVQIEEVSKLRAKYESLQRSHR 108
             MNK LERY +  Y S  T+    E++   +E  KL+AK + LQRSHR
Sbjct: 61  SCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHR 109

[Close]
BLAST of Cucsat.G1363 vs. NCBI nr
Match: KAA0033595.1 (MADS-box transcription factor 17-like [Cucumis melo var. makuwa] >TYK22261.1 MADS-box transcription factor 17-like [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (521), Expect = 7.90e-66
Identity = 105/107 (98.13%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107
           DMNKILERYHQQCYTSGSTTNLDESD+QIEEVSKLRAKYESLQRS+R
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYR 107

[Close]
BLAST of Cucsat.G1363 vs. NCBI nr
Match: XP_011651126.1 (agamous-like MADS-box protein MADS3 [Cucumis sativus] >KAE8650443.1 hypothetical protein Csa_009943 [Cucumis sativus])

HSP 1 Score: 207 bits (528), Expect = 1.13e-65
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107
           DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107

[Close]
BLAST of Cucsat.G1363 vs. NCBI nr
Match: XP_008439145.1 (PREDICTED: MADS-box transcription factor 17-like [Cucumis melo])

HSP 1 Score: 205 bits (521), Expect = 1.74e-64
Identity = 105/107 (98.13%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107
           DMNKILERYHQQCYTSGSTTNLDESD+QIEEVSKLRAKYESLQRS+R
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYR 107

[Close]
BLAST of Cucsat.G1363 vs. NCBI nr
Match: XP_022141193.1 (MADS-box transcription factor 6-like [Momordica charantia])

HSP 1 Score: 193 bits (491), Expect = 4.31e-60
Identity = 99/107 (92.52%), Postives = 104/107 (97.20%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIF +RGKLFEF ST
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107
           DMNKILERYHQ+CY+SGST+NLDESDVQIEEVSKLRAKYESLQRSHR
Sbjct: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHR 107

[Close]
BLAST of Cucsat.G1363 vs. NCBI nr
Match: XP_038886448.1 (agamous-like MADS-box protein MADS3 [Benincasa hispida])

HSP 1 Score: 192 bits (489), Expect = 9.83e-60
Identity = 97/107 (90.65%), Postives = 106/107 (99.07%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIFS+RGKLFEFGST
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIIFSSRGKLFEFGST 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107
           DMNKILERYHQ+CY+SGS+TNLDESD+QIEEV+KLRAKYESL+RS+R
Sbjct: 61  DMNKILERYHQRCYSSGSSTNLDESDIQIEEVAKLRAKYESLRRSNR 107

[Close]
BLAST of Cucsat.G1363 vs. ExPASy TrEMBL
Match: A0A5D3DF02 (MADS-box transcription factor 17-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold440G00130 PE=4 SV=1)

HSP 1 Score: 205 bits (521), Expect = 3.83e-66
Identity = 105/107 (98.13%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107
           DMNKILERYHQQCYTSGSTTNLDESD+QIEEVSKLRAKYESLQRS+R
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYR 107

[Close]
BLAST of Cucsat.G1363 vs. ExPASy TrEMBL
Match: A0A1S3AY43 (MADS-box transcription factor 17-like OS=Cucumis melo OX=3656 GN=LOC103484028 PE=4 SV=1)

HSP 1 Score: 205 bits (521), Expect = 8.43e-65
Identity = 105/107 (98.13%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST
Sbjct: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107
           DMNKILERYHQQCYTSGSTTNLDESD+QIEEVSKLRAKYESLQRS+R
Sbjct: 61  DMNKILERYHQQCYTSGSTTNLDESDIQIEEVSKLRAKYESLQRSYR 107

[Close]
BLAST of Cucsat.G1363 vs. ExPASy TrEMBL
Match: A0A6J1CJS1 (MADS-box transcription factor 6-like OS=Momordica charantia OX=3673 GN=LOC111011649 PE=4 SV=1)

HSP 1 Score: 193 bits (491), Expect = 2.09e-60
Identity = 99/107 (92.52%), Postives = 104/107 (97.20%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKVVLERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALIIF +RGKLFEF ST
Sbjct: 1   MGRGKVVLERIENKVNRQVTFSKRRNGLLKKAYELSVLCDVDVALIIFYSRGKLFEFSST 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107
           DMNKILERYHQ+CY+SGST+NLDESDVQIEEVSKLRAKYESLQRSHR
Sbjct: 61  DMNKILERYHQRCYSSGSTSNLDESDVQIEEVSKLRAKYESLQRSHR 107

[Close]
BLAST of Cucsat.G1363 vs. ExPASy TrEMBL
Match: A0A6J1E935 (MADS-box transcription factor 6-like OS=Cucurbita moschata OX=3662 GN=LOC111430519 PE=4 SV=1)

HSP 1 Score: 182 bits (463), Expect = 2.74e-56
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 0 

Query: 2   GRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGSTD 61
           G+GKVV+ERIEN+VNRQVTFSKRRNGLLKKA ELSVLCDVDVALI+FS+RGKLFEFGSTD
Sbjct: 15  GKGKVVVERIENKVNRQVTFSKRRNGLLKKACELSVLCDVDVALIMFSSRGKLFEFGSTD 74

Query: 62  MNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107
           MNKILERYH +CY +GSTTNL  + VQIEEVSKLRAKYESLQRSHR
Sbjct: 75  MNKILERYHHRCYNTGSTTNLHHTHVQIEEVSKLRAKYESLQRSHR 120

[Close]
BLAST of Cucsat.G1363 vs. ExPASy TrEMBL
Match: A0A6P9EZQ4 (agamous-like MADS-box protein MADS3 isoform X4 OS=Juglans regia OX=51240 GN=LOC108998622 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 2.19e-43
Identity = 76/107 (71.03%), Postives = 89/107 (83.18%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+VVLERIEN++NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKLF+FGST
Sbjct: 1   MGRGRVVLERIENKINRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSSRGKLFQFGST 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 107
           +MNKILERY Q CY+  +      +     E+++LRAKYESLQRS R
Sbjct: 61  EMNKILERYRQCCYSQDTDVVEQGTQTLYREITRLRAKYESLQRSQR 107

[Close]
BLAST of Cucsat.G1363 vs. TAIR 10
Match: AT2G45650.1 (AGAMOUS-like 6 )

HSP 1 Score: 128.6 bits (322), Expect = 3.0e-30
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V ++RIEN++NRQVTFSKRRNGLLKKA ELSVLCD +VALIIFS+RGKL+EFGS 
Sbjct: 1   MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQ--IEEVSKLRAKYESLQRSHR 108
            +   +ERY+ +CY    + N  E   Q   +EV+KL++KYESL R++R
Sbjct: 61  GIESTIERYN-RCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNR 108

[Close]
BLAST of Cucsat.G1363 vs. TAIR 10
Match: AT3G02310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26
Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRG+V L+RIEN++NRQVTF+KRRNGLLKKA ELSVLCD +V+LI+FS RGKL+EF ST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  -DMNKILERYHQQCYTSGSTTNLDESDVQ--IEEVSKLRAKYESLQRSHR 108
            +M K LERY +  Y S    N    +++    E  KL+ +YE+LQR  R
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQR 110

[Close]
BLAST of Cucsat.G1363 vs. TAIR 10
Match: AT5G15800.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26
Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEF-GS 60
           MGRG+V L+RIEN++NRQVTF+KRRNGLLKKA ELSVLCD +VALIIFS RGKL+EF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  TDMNKILERYHQQCYTSGSTTNLDESDVQ--IEEVSKLRAKYESLQRSHR 108
           ++M K L+RY +  Y S    N    +++    E  KL+ +YE+LQR  R
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQR 110

[Close]
BLAST of Cucsat.G1363 vs. TAIR 10
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26
Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEF-GS 60
           MGRG+V L+RIEN++NRQVTF+KRRNGLLKKA ELSVLCD +VALIIFS RGKL+EF  S
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  TDMNKILERYHQQCYTSGSTTNLDESDVQ--IEEVSKLRAKYESLQRSHR 108
           ++M K L+RY +  Y S    N    +++    E  KL+ +YE+LQR  R
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQR 110

[Close]
BLAST of Cucsat.G1363 vs. TAIR 10
Match: AT3G61120.1 (AGAMOUS-like 13 )

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-26
Identity = 59/107 (55.14%), Postives = 81/107 (75.70%), Query Frame = 0 

Query: 1   MGRGKVVLERIENRVNRQVTFSKRRNGLLKKASELSVLCDVDVALIIFSTRGKLFEFGST 60
           MGRGKV ++RIEN++ RQVTFSKR++GLLKKA ELSVLCD +V+LIIFST GKL+EF + 
Sbjct: 1   MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60

Query: 61  DMNKILERYHQQCYTSGSTTNLDESDVQIEEVSKLRAKYESLQRSHR 108
            + + +ERY++          L+++    +EV+KL+ KYESL R+HR
Sbjct: 61  GVGRTIERYYRCKDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHR 107

The following BLAST results are available for this feature:
BLAST of Cucsat.G1363 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LLR13.1e-3267.29Agamous-like MADS-box protein MADS3 OS=Vitis vinifera OX=29760 GN=MADS3 PE=2 SV=... [more]
Q6EU392.6e-3164.81MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS... [more]
Q7XUN21.4e-2963.64MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
P293864.2e-2961.47Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 ... [more]
Q396856.0e-2863.30MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1[more]
BLAST of Cucsat.G1363 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0033595.17.90e-6698.13MADS-box transcription factor 17-like [Cucumis melo var. makuwa] >TYK22261.1 MAD... [more]
XP_011651126.11.13e-65100.00agamous-like MADS-box protein MADS3 [Cucumis sativus] >KAE8650443.1 hypothetical... [more]
XP_008439145.11.74e-6498.13PREDICTED: MADS-box transcription factor 17-like [Cucumis melo][more]
XP_022141193.14.31e-6092.52MADS-box transcription factor 6-like [Momordica charantia][more]
XP_038886448.19.83e-6090.65agamous-like MADS-box protein MADS3 [Benincasa hispida][more]
BLAST of Cucsat.G1363 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DF023.83e-6698.13MADS-box transcription factor 17-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3AY438.43e-6598.13MADS-box transcription factor 17-like OS=Cucumis melo OX=3656 GN=LOC103484028 PE... [more]
A0A6J1CJS12.09e-6092.52MADS-box transcription factor 6-like OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A6J1E9352.74e-5686.79MADS-box transcription factor 6-like OS=Cucurbita moschata OX=3662 GN=LOC1114305... [more]
A0A6P9EZQ42.19e-4371.03agamous-like MADS-box protein MADS3 isoform X4 OS=Juglans regia OX=51240 GN=LOC1... [more]
BLAST of Cucsat.G1363 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45650.13.0e-3061.47AGAMOUS-like 6 [more]
AT3G02310.11.2e-2658.18K-box region and MADS-box transcription factor family protein [more]
AT5G15800.11.2e-2658.18K-box region and MADS-box transcription factor family protein [more]
AT5G15800.21.2e-2658.18K-box region and MADS-box transcription factor family protein [more]
AT3G61120.12.0e-2655.14AGAMOUS-like 13 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..142
NoneNo IPR availableCOILSCoilCoilcoord: 151..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..189
NoneNo IPR availablePANTHERPTHR48019SERUM RESPONSE FACTOR HOMOLOGcoord: 1..176
NoneNo IPR availablePANTHERPTHR48019:SF70TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A-LIKE ISOFORM X1coord: 1..176
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 3..23
score: 64.27
coord: 38..59
score: 59.69
coord: 23..38
score: 82.94
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 6.2E-38
score: 142.0
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
e-value: 2.9E-26
score: 90.7
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 30.865862
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 14..92
e-value: 2.3E-29
score: 103.3
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 2..87
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 89..169
e-value: 5.8E-24
score: 84.1
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 85..175
score: 13.98754
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 2..78
e-value: 1.17321E-42
score: 136.913

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G1363.T2Cucsat.G1363.T2mRNA
Cucsat.G1363.T3Cucsat.G1363.T3mRNA
Cucsat.G1363.T1Cucsat.G1363.T1mRNA
Cucsat.G1363.T4Cucsat.G1363.T4mRNA
Cucsat.G1363.T8Cucsat.G1363.T8mRNA
Cucsat.G1363.T9Cucsat.G1363.T9mRNA
Cucsat.G1363.T10Cucsat.G1363.T10mRNA
Cucsat.G1363.T5Cucsat.G1363.T5mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity