Cucsat.G13572 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13572
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	fibroin heavy chain-like isoform X47
Location	ctg1838: 9362797 .. 9364194 (+)
RNA-Seq Expression	Cucsat.G13572
Synteny	Cucsat.G13572

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGATGTAGATTTTGGGCCACCCACTTTCTCCCCTTCTTGCATGTGCCTCAACCACTCTCTACCATAACTTGCACTTTTTACTCCCCATCTTTTCCTTATATATATATATATATAGCCTTTAGTCCCCTTTCATTTCACTTCAACCATTCACAAATGGCTTCTCATAAGTTTTCTTCTTTTGTATTGTTCTTTCTTTTGTTAGGTATTGGGGTTTCATATGCAGCTAGAACTCTCTTAACTTATGGTGGAGGACCAGTGAATATACCTGCATTTGCTTATGGTGCAGGCAATGGTGGAGGTGGTGGAAGCGGTGGTGGATATGGTCCACTTGGTGGTGGTGGTGGAGGTTATGGAAGTGGAGGTGGTGGTAGTTATAGTTCTGTAGGAGTACAATATGGTGTTGGAGGCTATGGAAGTGGAGGTGGAGGTGGAAGTGGTGGTGGTGAAGGATACGGTCCTAGTGGTGGCTATGGTGGAGGAGGAGGTGGTGGGAGTGGCGGTGGTTCTGCTTATGGTCATGGTGGTTCTGCTTATGGAGGTGGTGGAGGAAGTGGCGGAGGAGGTGGTTATGGTCCTGGTGGTGGTGGATATGGAGGGGGTGGTGGAAATGGTGGTGGAGCGAGTTATGGTCCTGGAGAAGGTAGTGGATATGGAGGTGTAGGATATGGTGGAGGTGGTGGTAGTGGAGGTGGTGTGGGGTATGGCCCGGGAGGTGGAGGGTATGGAGGAGGTGGTGGGAATGGAGGTGGGGCTGGATATGGTCTTGGGGGTGCAGGATATGGAGGAGGTGGTGGAAATGGCGGTGGGGCAGGATATGGTCATGAAGGTGCAGGTTATGGAGGGGGTGGTGGAAATGGCGGTGGAGGAGGATATGGCCATGAAGGTGCAGGGTATGGAGGGGGTGGTGGAAATGGCGGTGGAGGAGGATACGGTCATGAAAGTGGAGGATATGGAGGTAATGGAGGAAATGGCGGTGGTCATGAAAGTGGAGGATATGGAGGCAGTGGTCATGAAAGTGGAGGATATGGAGGTAGTGGAGGAAATAACGGCGGTCATGAAAGTGGAGGATACGGAGGCAGTGGAGGAAATGGAGGAAATGGCGGCAGTCATGAAAGTGGAGGATATGGAGGCAGTGGAGGAAATGGAGGTGGTCATGAAAGTGGAGGATACGGAGGCAGCGGAGGAAATGGTGGCGGTCATGAAAGTGGAGGATATGGAGGCAGTGGAGGAAATAGTGGTGGTCATGAAAGTGGAGGATATGGAGGAAGTGAAGGACATGGCGGTGGTCATGAAAGTGGAGGATACGGAGGCAGTGGAGGAAATGGTGGCGGTCATGAAAGTGGAGGATATGGAGGTAGTGGAGGAAATGGCGGTGGTCATGAAAGTGGAGGATATGG

Coding sequence (CDS)

AGATGTAGATTTTGGGCCACCCACTTTCTCCCCTTCTTGCATGTGCCTCAACCACTCTCTACCATAACTTGCACTTTTTACTCCCCATCTTTTCCTTATATATATATATATATAGCCTTTAGTCCCCTTTCATTTCACTTCAACCATTCACAAATGGCTTCTCATAAGTTTTCTTCTTTTGTATTGTTCTTTCTTTTGTTAGGTATTGGGGTTTCATATGCAGCTAGAACTCTCTTAACTTATGGTGGAGGACCAGTGAATATACCTGCATTTGCTTATGGTGCAGGCAATGGTGGAGGTGGTGGAAGCGGTGGTGGATATGGTCCACTTGGTGGTGGTGGTGGAGGTTATGGAAGTGGAGGTGGTGGTAGTTATAGTTCTGTAGGAGTACAATATGGTGTTGGAGGCTATGGAAGTGGAGGTGGAGGTGGAAGTGGTGGTGGTGAAGGATACGGTCCTAGTGGTGGCTATGGTGGAGGAGGAGGTGGTGGGAGTGGCGGTGGTTCTGCTTATGGTCATGGTGGTTCTGCTTATGGAGGTGGTGGAGGAAGTGGCGGAGGAGGTGGTTATGGTCCTGGTGGTGGTGGATATGGAGGGGGTGGTGGAAATGGTGGTGGAGCGAGTTATGGTCCTGGAGAAGGTAGTGGATATGGAGGTGTAGGATATGGTGGAGGTGGTGGTAGTGGAGGTGGTGTGGGGTATGGCCCGGGAGGTGGAGGGTATGGAGGAGGTGGTGGGAATGGAGGTGGGGCTGGATATGGTCTTGGGGGTGCAGGATATGGAGGAGGTGGTGGAAATGGCGGTGGGGCAGGATATGGTCATGAAGGTGCAGGTTATGGAGGGGGTGGTGGAAATGGCGGTGGAGGAGGATATGGCCATGAAGGTGCAGGGTATGGAGGGGGTGGTGGAAATGGCGGTGGAGGAGGATACGGTCATGAAAGTGGAGGATATGGAGGTAATGGAGGAAATGGCGGTGGTCATGAAAGTGGAGGATATGGAGGTAGTGGAGGAAATGGCGGTGGTCATGAAAGTGGAGGATAT

Protein sequence

RCRFWATHFLPFLHVPQPLSTITCTFYSPSFPYIYIYIAFSPLSFHFNHSQMASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLGGGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAYGHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGGVGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGYGHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGGNGGGHESGGY

Homology

[Close]

BLAST of Cucsat.G13572 vs. NCBI nr
Match: XP_031738893.1 (glycine-rich cell wall structural protein 1.8 isoform X2 [Cucumis sativus])

HSP 1 Score: 363 bits (932), Expect = 2.04e-118
Identity = 295/296 (99.66%), Postives = 295/296 (99.66%), Query Frame = 0


Query: 52  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 111
           MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG
Sbjct: 1   MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 60

Query: 112 GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 171
           GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY
Sbjct: 61  GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 120

Query: 172 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 231
           GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG
Sbjct: 121 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 180

Query: 232 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 291
           VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY
Sbjct: 181 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 240

Query: 292 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGGNGGGHESGGY 347
           GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGGN GGHESGGY
Sbjct: 241 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGGNNGGHESGGY 296

[Close]

BLAST of Cucsat.G13572 vs. NCBI nr
Match: XP_031738895.1 (glycine-rich cell wall structural protein 1 isoform X4 [Cucumis sativus])

HSP 1 Score: 354 bits (909), Expect = 2.05e-116
Identity = 291/296 (98.31%), Postives = 291/296 (98.31%), Query Frame = 0


Query: 52  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 111
           MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG
Sbjct: 1   MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 60

Query: 112 GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 171
           GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY
Sbjct: 61  GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 120

Query: 172 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 231
           GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG
Sbjct: 121 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 180

Query: 232 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 291
           VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY
Sbjct: 181 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 240

Query: 292 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGGNGGGHESGGY 347
           GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSG     HESGGY
Sbjct: 241 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSG-----HESGGY 291

[Close]

BLAST of Cucsat.G13572 vs. NCBI nr
Match: XP_031738894.1 (glycine-rich cell wall structural protein 1.8 isoform X3 [Cucumis sativus])

HSP 1 Score: 355 bits (911), Expect = 2.78e-115
Identity = 295/306 (96.41%), Postives = 295/306 (96.41%), Query Frame = 0


Query: 52  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 111
           MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG
Sbjct: 1   MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 60

Query: 112 GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 171
           GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY
Sbjct: 61  GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 120

Query: 172 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 231
           GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG
Sbjct: 121 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 180

Query: 232 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 291
           VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY
Sbjct: 181 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 240

Query: 292 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSG----------GNGGG 347
           GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSG          GN GG
Sbjct: 241 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGHESGGYGGSGGNNGG 300

[Close]

BLAST of Cucsat.G13572 vs. NCBI nr
Match: XP_031738892.1 (glycine-rich cell wall structural protein 1.8 isoform X1 [Cucumis sativus] >KAE8651439.1 hypothetical protein Csa_001535 [Cucumis sativus])

HSP 1 Score: 355 bits (911), Expect = 3.95e-115
Identity = 295/306 (96.41%), Postives = 295/306 (96.41%), Query Frame = 0


Query: 52  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 111
           MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG
Sbjct: 1   MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 60

Query: 112 GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 171
           GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY
Sbjct: 61  GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 120

Query: 172 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 231
           GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG
Sbjct: 121 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 180

Query: 232 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 291
           VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY
Sbjct: 181 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 240

Query: 292 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSG----------GNGGG 347
           GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSG          GN GG
Sbjct: 241 GHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGHESGGYGGSGGNNGG 300

[Close]

BLAST of Cucsat.G13572 vs. NCBI nr
Match: XP_038887344.1 (glycine-rich cell wall structural protein 1.8-like isoform X2 [Benincasa hispida])

HSP 1 Score: 251 bits (642), Expect = 2.74e-76
Identity = 261/314 (83.12%), Postives = 264/314 (84.08%), Query Frame = 0


Query: 52  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGP-VNIPAFAYGAGNGGGGGSGGGYGPL 111
           MASHK SSFV FFLLLGIGVS AARTLLTY  G  VNIPAFAYGAGNG GGGSGGGYGPL
Sbjct: 1   MASHKLSSFV-FFLLLGIGVSSAARTLLTYADGESVNIPAFAYGAGNGAGGGSGGGYGPL 60

Query: 112 GG--GGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGG 171
           GG  GGGGYG GGG SY S G QYGVGGYGSGGGGGSGGG GYGPSGGYGGGGGGGSGGG
Sbjct: 61  GGHGGGGGYGGGGGSSYGSEG-QYGVGGYGSGGGGGSGGGGGYGPSGGYGGGGGGGSGGG 120

Query: 172 SAYGHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGP-------GEGSGYGGVG 231
           SAYGHGGSAYGGGGG G G GYGPGGGGYGGGGGNGGGA YGP       G G+GYGGVG
Sbjct: 121 SAYGHGGSAYGGGGGGGEGVGYGPGGGGYGGGGGNGGGAGYGPSGGGYGPGGGNGYGGVG 180

Query: 232 YGGGGGSGGGVGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGG 291
           YGGGGGSGGGVGYG GGGGYGGGGGNGGGAGYG GG+GYGGGGGNGGGAGYGHEGAGYGG
Sbjct: 181 YGGGGGSGGGVGYGLGGGGYGGGGGNGGGAGYGPGGSGYGGGGGNGGGAGYGHEGAGYGG 240

Query: 292 GGGNGGGGGYGHEGAGYGGGGGNGGGGGYGHESGGYGGNGGNGGG----HESGGYGGSGG 347
           GGGNGGG GYGHE  GYGGGGG+GGG GYGHE  GYGG GGNGGG    HE  GYGG GG
Sbjct: 241 GGGNGGGAGYGHESGGYGGGGGSGGGAGYGHEGAGYGGGGGNGGGAGYGHEGAGYGGGGG 300

[Close]

BLAST of Cucsat.G13572 vs. ExPASy TrEMBL
Match: A0A0A0LH77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902220 PE=4 SV=1)

HSP 1 Score: 321 bits (823), Expect = 1.70e-104
Identity = 278/289 (96.19%), Postives = 279/289 (96.54%), Query Frame = 0


Query: 52  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 111
           MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG
Sbjct: 1   MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGGPVNIPAFAYGAGNGGGGGSGGGYGPLG 60

Query: 112 GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 171
           GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY
Sbjct: 61  GGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSAY 120

Query: 172 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 231
           GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG
Sbjct: 121 GHGGSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGGVGYGGGGGSGGG 180

Query: 232 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGGGY 291
           VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGG  Y
Sbjct: 181 VGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAGYGGGGGNGGGASY 240

Query: 292 GH-EGAGYGG-GGGNGGGGGYGHESGGYGGNGGNGGGHESGGYGGSGGN 338
           G  EG+GYGG GGGNGG    GHESGGYGGNGGNGG HESGGYGGSGGN
Sbjct: 241 GPGEGSGYGGVGGGNGG----GHESGGYGGNGGNGGSHESGGYGGSGGN 285

[Close]

BLAST of Cucsat.G13572 vs. ExPASy TrEMBL
Match: A0A6J1HV81 (glycine-rich cell wall structural protein 1.8-like isoform X50 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 199 bits (505), Expect = 1.88e-53
Identity = 240/318 (75.47%), Postives = 244/318 (76.73%), Query Frame = 0


Query: 52  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGG-PVNIPAFAYGAGNGGGGGSGGGYGPL 111
           MASHK  S  +FFLLLGIGVS AAR LLTYG G PVNIPAFAYGAG G G GSGGGYG L
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 112 GGGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSA 171
           GG GGG G+GGG  Y SVG +YGVGGYGSGGGGGSG G GYGP GG G GGGGGSGGG  
Sbjct: 61  GGYGGGGGNGGGSGYGSVG-EYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGG 120

Query: 172 YGHG-----------GSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG 231
           YG G           GS YGGG  SGGG GYGPGGGGYGGGGGNGGGA YGPG      G
Sbjct: 121 YGSGVRYGEVGYGSGGSGYGGG--SGGGAGYGPGGGGYGGGGGNGGGAGYGPG------G 180

Query: 232 VGYGGGGGSGGGVGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAG- 291
            GYGGGGG+GGG GYG  GGGYGGGGGNGGGAGYG  G GYGGGGGNGGGAGYGHEG G 
Sbjct: 181 SGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGG 240

Query: 292 YGGGGGNGGGGGYGHEGAG-YGGGGGNGGGGGYGHESGGYGGNGGNGGG----HESGGYG 347
           YGGGGGNGGG GYGHEG G YGGGGGNGGG GYGHE GGYGG GGNGGG    HE GGYG
Sbjct: 241 YGGGGGNGGGAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYG 300

[Close]

BLAST of Cucsat.G13572 vs. ExPASy TrEMBL
Match: A0A6J1HR00 (PE-PGRS family protein PE_PGRS16-like isoform X49 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 199 bits (505), Expect = 2.20e-53
Identity = 240/318 (75.47%), Postives = 244/318 (76.73%), Query Frame = 0


Query: 52  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGG-PVNIPAFAYGAGNGGGGGSGGGYGPL 111
           MASHK  S  +FFLLLGIGVS AAR LLTYG G PVNIPAFAYGAG G G GSGGGYG L
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 112 GGGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSA 171
           GG GGG G+GGG  Y SVG +YGVGGYGSGGGGGSG G GYGP GG G GGGGGSGGG  
Sbjct: 61  GGYGGGGGNGGGSGYGSVG-EYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGG 120

Query: 172 YGHG-----------GSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG 231
           YG G           GS YGGG  SGGG GYGPGGGGYGGGGGNGGGA YGPG      G
Sbjct: 121 YGSGVRYGEVGYGSGGSGYGGG--SGGGAGYGPGGGGYGGGGGNGGGAGYGPG------G 180

Query: 232 VGYGGGGGSGGGVGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAG- 291
            GYGGGGG+GGG GYG  GGGYGGGGGNGGGAGYG  G GYGGGGGNGGGAGYGHEG G 
Sbjct: 181 SGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGG 240

Query: 292 YGGGGGNGGGGGYGHEGAG-YGGGGGNGGGGGYGHESGGYGGNGGNGGG----HESGGYG 347
           YGGGGGNGGG GYGHEG G YGGGGGNGGG GYGHE GGYGG GGNGGG    HE GGYG
Sbjct: 241 YGGGGGNGGGAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYG 300

[Close]

BLAST of Cucsat.G13572 vs. ExPASy TrEMBL
Match: A0A6J1HS93 (fibroin heavy chain-like isoform X48 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 199 bits (505), Expect = 3.51e-53
Identity = 240/318 (75.47%), Postives = 244/318 (76.73%), Query Frame = 0


Query: 52  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGG-PVNIPAFAYGAGNGGGGGSGGGYGPL 111
           MASHK  S  +FFLLLGIGVS AAR LLTYG G PVNIPAFAYGAG G G GSGGGYG L
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 112 GGGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSA 171
           GG GGG G+GGG  Y SVG +YGVGGYGSGGGGGSG G GYGP GG G GGGGGSGGG  
Sbjct: 61  GGYGGGGGNGGGSGYGSVG-EYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGG 120

Query: 172 YGHG-----------GSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG 231
           YG G           GS YGGG  SGGG GYGPGGGGYGGGGGNGGGA YGPG      G
Sbjct: 121 YGSGVRYGEVGYGSGGSGYGGG--SGGGAGYGPGGGGYGGGGGNGGGAGYGPG------G 180

Query: 232 VGYGGGGGSGGGVGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAG- 291
            GYGGGGG+GGG GYG  GGGYGGGGGNGGGAGYG  G GYGGGGGNGGGAGYGHEG G 
Sbjct: 181 SGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGG 240

Query: 292 YGGGGGNGGGGGYGHEGAG-YGGGGGNGGGGGYGHESGGYGGNGGNGGG----HESGGYG 347
           YGGGGGNGGG GYGHEG G YGGGGGNGGG GYGHE GGYGG GGNGGG    HE GGYG
Sbjct: 241 YGGGGGNGGGAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYG 300

[Close]

BLAST of Cucsat.G13572 vs. ExPASy TrEMBL
Match: A0A6J1HUM8 (fibroin heavy chain-like isoform X47 OS=Cucurbita maxima OX=3661 GN=LOC111466985 PE=4 SV=1)

HSP 1 Score: 199 bits (505), Expect = 3.59e-53
Identity = 240/318 (75.47%), Postives = 244/318 (76.73%), Query Frame = 0


Query: 52  MASHKFSSFVLFFLLLGIGVSYAARTLLTYGGG-PVNIPAFAYGAGNGGGGGSGGGYGPL 111
           MASHK  S  +FFLLLGIGVS AAR LLTYG G PVNIPAFAYGAG G G GSGGGYG L
Sbjct: 1   MASHKRLSSFIFFLLLGIGVSSAARNLLTYGEGKPVNIPAFAYGAGGGAGAGSGGGYGSL 60

Query: 112 GGGGGGYGSGGGGSYSSVGVQYGVGGYGSGGGGGSGGGEGYGPSGGYGGGGGGGSGGGSA 171
           GG GGG G+GGG  Y SVG +YGVGGYGSGGGGGSG G GYGP GG G GGGGGSGGG  
Sbjct: 61  GGYGGGGGNGGGSGYGSVG-EYGVGGYGSGGGGGSGEGGGYGPGGGNGYGGGGGSGGGGG 120

Query: 172 YGHG-----------GSAYGGGGGSGGGGGYGPGGGGYGGGGGNGGGASYGPGEGSGYGG 231
           YG G           GS YGGG  SGGG GYGPGGGGYGGGGGNGGGA YGPG      G
Sbjct: 121 YGSGVRYGEVGYGSGGSGYGGG--SGGGAGYGPGGGGYGGGGGNGGGAGYGPG------G 180

Query: 232 VGYGGGGGSGGGVGYGPGGGGYGGGGGNGGGAGYGLGGAGYGGGGGNGGGAGYGHEGAG- 291
            GYGGGGG+GGG GYG  GGGYGGGGGNGGGAGYG  G GYGGGGGNGGGAGYGHEG G 
Sbjct: 181 SGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGG 240

Query: 292 YGGGGGNGGGGGYGHEGAG-YGGGGGNGGGGGYGHESGGYGGNGGNGGG----HESGGYG 347
           YGGGGGNGGG GYGHEG G YGGGGGNGGG GYGHE GGYGG GGNGGG    HE GGYG
Sbjct: 241 YGGGGGNGGGAGYGHEGGGGYGGGGGNGGGAGYGHEGGGYGGGGGNGGGAGYGHEGGGYG 300

The following BLAST results are available for this feature:

BLAST of Cucsat.G13572 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G13572 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738893.1	2.04e-118	99.66	glycine-rich cell wall structural protein 1.8 isoform X2 [Cucumis sativus]	[more]
XP_031738895.1	2.05e-116	98.31	glycine-rich cell wall structural protein 1 isoform X4 [Cucumis sativus]	[more]
XP_031738894.1	2.78e-115	96.41	glycine-rich cell wall structural protein 1.8 isoform X3 [Cucumis sativus]	[more]
XP_031738892.1	3.95e-115	96.41	glycine-rich cell wall structural protein 1.8 isoform X1 [Cucumis sativus] >KAE8...	[more]
XP_038887344.1	2.74e-76	83.12	glycine-rich cell wall structural protein 1.8-like isoform X2 [Benincasa hispida...	[more]

BLAST of Cucsat.G13572 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH77	1.70e-104	96.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902220 PE=4 SV=1	[more]
A0A6J1HV81	1.88e-53	75.47	glycine-rich cell wall structural protein 1.8-like isoform X50 OS=Cucurbita maxi...	[more]
A0A6J1HR00	2.20e-53	75.47	PE-PGRS family protein PE_PGRS16-like isoform X49 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1HS93	3.51e-53	75.47	fibroin heavy chain-like isoform X48 OS=Cucurbita maxima OX=3661 GN=LOC111466985...	[more]
A0A6J1HUM8	3.59e-53	75.47	fibroin heavy chain-like isoform X47 OS=Cucurbita maxima OX=3661 GN=LOC111466985...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 68..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13572.T1	Cucsat.G13572.T1	mRNA
Cucsat.G13572.T4	Cucsat.G13572.T4	mRNA
Cucsat.G13572.T5	Cucsat.G13572.T5	mRNA
Cucsat.G13572.T6	Cucsat.G13572.T6	mRNA
Cucsat.G13572.T7	Cucsat.G13572.T7	mRNA
Cucsat.G13572.T8	Cucsat.G13572.T8	mRNA
Cucsat.G13572.T13	Cucsat.G13572.T13	mRNA
Cucsat.G13572.T18	Cucsat.G13572.T18	mRNA
Cucsat.G13572.T3	Cucsat.G13572.T3	mRNA
Cucsat.G13572.T10	Cucsat.G13572.T10	mRNA
Cucsat.G13572.T19	Cucsat.G13572.T19	mRNA
Cucsat.G13572.T2	Cucsat.G13572.T2	mRNA
Cucsat.G13572.T12	Cucsat.G13572.T12	mRNA
Cucsat.G13572.T16	Cucsat.G13572.T16	mRNA
Cucsat.G13572.T9	Cucsat.G13572.T9	mRNA
Cucsat.G13572.T11	Cucsat.G13572.T11	mRNA
Cucsat.G13572.T15	Cucsat.G13572.T15	mRNA
Cucsat.G13572.T14	Cucsat.G13572.T14	mRNA
Cucsat.G13572.T17	Cucsat.G13572.T17	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0097159	organic cyclic compound binding