Cucsat.G13550 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13550
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	ergosterol biosynthetic protein 28
Location	ctg1838: 8841952 .. 8846201 (+)
RNA-Seq Expression	Cucsat.G13550
Synteny	Cucsat.G13550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACACATTTGAATTTGTAGAACAGTGTACAGATTTAAACATGACATGAAAGAAGAGATGCTGTGTGAATGTCAGGTGCATGCAGGACAAGTCGAAGAGGTAGTACCACTGCATAGATTGTTCAAAACAACATAGCCACCAATATTCCAACTGGTGCCATAAACACACAGTAAATCGGTCACAATATCAAAGTGAAATATATTCAGTAAAGCTACTATAGTCTGGTTGCTCGTAACAAATCATGAAATGTAATTATAAAACTTGTATAGCTTCTAATAGCCTAAAGGATATAGATTTGAGAATGGTGTTTAAATCTTTTTTAAGACAATTGTTAATGAAAGAAATAAACAATAAACAAAAAAAAAAGTTACACCAATTTACATGCTTGACTAACAACTCTATTAACTACATTTATTGATAAAGTACACTAGAAATAGCATGAAAATACATGTCCTAAGAAGAGAAAGCTAAAGTTTCAGGTTATGGACTAATTAGCAGACTAGACAAACATATACCCATTGGAAAATAATAAAGTTGCACTTAGTTAGGCACCCTGAAGTTAGGCTTGAGTATCGTAAACTAAACTAACATCTCCAAGGTTGTATGTAATGATATGAATGAATACATTATAAATGTAATAGTCTCCATCAAGAGGACTAGTGGAAGGAGAATAACAATGATTAAAGATGATAATGTGGGGGCATTAAGTTTGTTTTGATGTGTTTGTGTATATGGAGGAATGGATGTTAGGTAGTGATTTTTGTGAAGATGAAGCTAAAAAGATGTAAAAAGTGAAGAGAAGATAGGCTAAGTGGCAATAATGATGAATTGAAAATGTAGTAAAGTGGGTGTATATGATATGATGACGTAAGTTTTTATGTTGAGGTTTGGAGTTATATTGTTTGTCTTTACATTTAAAGCACAAAGTGTGTTCCAAACGTGGGCCTGAGGTGGAAACATATGGGCTCCGGTTCTGTTTAACGTGGGCCTGTACGGACACCACGCCACACACGTGCTCTCTGAATTCATTATTATTTTTTATTATTTCTTTTGCTTTTTAATATTGTAAAAAAGGAAAAAAATGTAAATGTAAAATTTGGTAATATTTTCCATACAAATTATTTTCTTTGCTTTGTGAGATAGAGAGAGTTGGAATTCCTGTAGATCTCGGCGAAATGAAGGTGCTAGGATGGTGGTTGATGCTGGTGGGTTCGCTCCGATTAGCCTCCGTTTGGTTTGGGTTCTTTGACATATGGGCATTGAGGCTCGCCGTCTTCTCGAACGCCACTAGTAATTTCTTTCTTTCTCTCTCTCTCGAAAATCTCATTCATCTATTAATTTTGGGTTCAGGAGCTTATGCTCAAAATGTTCATTCTCCTTCTCTTGCATCTAGATGAATGAATGTAATACTGTTATCTCTCTGCTACTCCCGTGACTAATTCAATTCCACCGATATCAAAATTCGTGGTACGTCTTTTAATGTGCTATCACGGACTGGAGTTGTTGCTCTGTGTTTCCATCCGTGACCTAATGGTTGAATTTTTGTTGTCAGATTTCTTGATTTTTGTAATGCTTGACTCTGTTTTATCGTGTTTTTACATTGATGGTGAAATTCATAAATTGGAAGCTAATTAAGCATCTGCATTATCTACGAAGTTAATCCATTATCGACGCAATCAGTTTCTAAGTAAGCCTGAGAAGTGAGCTCAATCAGTTTCTTAGGATGGGGCTTTTGAACTCGACATCACTTGGTTAATTTAATGCGTGTTGGAGAGTGATTTTGAAATGGTTGTCAATGAAGGAGAGGATTCACACTTAGTGGACAGTATACAGTATCTCGTAATTGGAAATCTGTAAATTTTTCTCCTTTGCGGACTTCTATTTCATAGTTGATGTTCTTTTTAGGAGGAAGTACATAGACTATCAAGATGGCAGATTTAAATTATTTTTTTGCTTGGAAAATTGTGTTATATGGAATAAGCAAGCATGGTTAGGAATTAGGATACTTCTTGGTGCAATAGTTTTAATCGTCTGTCATATAAACTTGAAGAAGGTGAATGGATTAGGGTGTTAATTTGTTTTGATAACCATGCCGTAATCAATTCACACCATGGCTTCTCACAGCATAGTTCATTATCGGAATTTTATCGAAGTAGATATTAAATGGAATGTTTTCCCCTCTGTAAATTACTCAGTTTTCCTATTCTGTTTCAATCAACTATAGTGATCTCGTACTTAATGTCATGCTAAATTGTTATTAACTATTATCTTAGAGAAAGTTTGTTTATTTAAAAGTTTTCTTAATCTTCTTGTTATTTATGGACTCTAAAACATTTGTGATGATTATTATTAGTTCTAGACGCATAGACTTATGTTGAAGAAGACATATATCTTCTTCATACATGTGTGGGTTTAGGAAGACTTACTCTGATTATTAAATTTAACAAGCGGGCTGATATTATTGTAAGTAGGAAAATTACTATACATGGATTTCAATTTGGGGTCCCCTATTATAGTGTTTAAATAATTTTTAAATTCTAATTTACTTTTCATTCGAACATTAATATAACTATTTAGATAATTTCTGGTACCGATTCATGTCATTATCTTATGTCATGCTTAATCCTGAATATTCTTCTCTCTCTTGCTGTATTGTGTGATAGTGACTGAAGTTCATGGAAGGACATTTGGAGTGTGGACTCTCCTAACTTGTACCCTTTGCATTCTCTGTGCATTCAACCTTGAGAATAAGCCCATTTATTTGGCGACATTTTTGTCATTCATCTATGCCTTGGGGCATTTCTTAACTGAATACTTGATATATCATACCATGTCCATTGCAAATCTTACGACGGTTGGCATCTTTGCAGGTATGATCGCTAGAATTAAATCCATCCCCATCACATATTTGGACTTTCACATATTTTGCTCTATGGTCTATTCTCCTTTGTTATTTTTAAATCTTGAACCAAAAGAATTTTTTTTTACAAGAATTTATCTGGCTGATTCTATATACTGCATCATATTAGATGAATAATTAGTATAGATCCGTCTACTCTCTCATGACACAATAATATTAATTAGTAGGACATTTCAGTCAATAGAACAGTGATTTTGTTCCCGTTCATAGTATTGCGTCTATTGTGAAACTGATATTTGCTACTCAACCAGAGAAGAAATAATGCTTGTTGTTTAGCCTCTTGTTTTTGACATCAAACATAAAGATCACTCATTCATGTTGAACTTTTGTTAACAGGCACATCAATAATATGGATGCTGCTCCAGTGGAATTCACACCAAAGAGTTCACCCCAAACATTCTTAATATGAGTAGATGCTCAAATTTAATCTGTAAACTTATTTTCTTCGATCCAGGGCACTGAATAAACAAAGAACACTAGACTAGCCTCGAAACACCTTCATCATCATTAGACTCTACCCAATATGATTTAACCTGATTTTGTTGGTTCGGTATAATACCATGCTGATGATGACGCTCTTGCAGCTTGTGCTGAAAATGGAACTAATTGAGCTGCCATCACAAAGAAACAAGCCATTTGCTTTATGAGGTTTCTTCATTGTAATTTTTAGTTTTAATAGATTCATGCCCTCACAATTTCATTCCTGTGAAATCTCTGCCATGTTCTATCCCCATTGCTGCTGCTATCTTGATGTCAATCCCCCTAAACATCCGTTTATTTTAACATCTAAGAGAGAATTTAACCCTTGTATTTCTAATTTGTATCGGGTAGTGTTATTAAGAGAAACAGTTTTTGAATATGTTGATATGGACGGCGATCAGAGAGTATCCATGATGAACGAATGATTTCTCTAAATATTGGCTTAAAAGCAAGGATATTCCTTCAGTTGTTGTCCTTTAATCAGTTTCTCTCTCTTCAATTCAGTATGAGTACATGCATTGCTTTTTGTGGGGCAACAGGAAGGGATTGGCTTGCGGAATTGACAGGCCCTGACCTCCTCCCACAGCAGCATGGTGGATCGATCATATCATGTGTAAGTCTTCATTTCCTCCATCTCTTCCAAAATTATTTTGTAAGTCATTTCAATGTTTTAACGCTATGATGGATGTGATATTCAAGTAAAGCTATCCACACATTCAAAGAAAAGAAACATGCACTTGATTTGAGATCACCACTTTTGTTGCTTCCCATATAATAAGTTAAAGTTGTTTGGAATTTACTAGTCTCTTTTCTATTCCGTTCCCTTGAATTTCAGCCATGCAACTCTAGCGACCGATCAAATGGAAACAAACACGTTTCTGTTCCAAAAGAATCAATCATGTGGTCTATTACTTAGAGAGGCTGTATGGAAATTAAAACTGATTTCTGAAAAGGATCAAGAGGGATGGGTATTGAGTAAAAACACTAACTCCATAAAAGCAAAATTCATTTTATAACACTTGCTGCTGATACTGTTCTCACTATATAGATTCCCACATGCTTCTCAAG

Coding sequence (CDS)

ATGTCAGGTGCATGCAGGACAAGTCGAAGAGAGAGAGTTGGAATTCCTGTAGATCTCGGCGAAATGAAGGTGCTAGGATGGTGGTTGATGCTGGTGGGTTCGCTCCGATTAGCCTCCGTTTGGTTTGGGTTCTTTGACATATGGGCATTGAGGCTCGCCGTCTTCTCGAACGCCACTATGACTGAAGTTCATGGAAGGACATTTGGAGTGTGGACTCTCCTAACTTGTACCCTTTGCATTCTCTGTGCATTCAACCTTGAGAATAAGCCCATTTATTTGGCGACATTTTTGTCATTCATCTATGCCTTGGGGCATTTCTTAACTGAATACTTGATATATCATACCATGTCCATTGCAAATCTTACGACGGTTGGCATCTTTGCAGGCACATCAATAATATGGATGCTGCTCCAGTGGAATTCACACCAAAGAGTTCACCCCAAACATTCTTAA

Protein sequence

MSGACRTSRRERVGIPVDLGEMKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCILCAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNSHQRVHPKHS

Homology

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BLAST of Cucsat.G13550 vs. ExPASy Swiss-Prot
Match: O80594 (Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana OX=3702 GN=At1g10030 PE=2 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-57
Identity = 107/129 (82.95%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MK LG+WLM+VGSLRLASVWFGFF+IWALRLAVFS  TM+EVHGRTFGVWTLLTCTLC L
Sbjct: 1   MKALGYWLMVVGSLRLASVWFGFFNIWALRLAVFSQTTMSEVHGRTFGVWTLLTCTLCFL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLENKP+YLATFLSFIYALGHFLTEYL Y TM+IANL+TVG FAGTSI+WMLL+WNS
Sbjct: 61  CAFNLENKPLYLATFLSFIYALGHFLTEYLFYQTMTIANLSTVGFFAGTSIVWMLLEWNS 120

Query: 121 HQRVHPKHS 130
            ++ H K S
Sbjct: 121 LEQPHSKLS 129

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BLAST of Cucsat.G13550 vs. ExPASy Swiss-Prot
Match: Q9UKR5 (Ergosterol biosynthetic protein 28 homolog OS=Homo sapiens OX=9606 GN=ERG28 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08
Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNA--TMTEVHGRTFGVWTLLTCTLC 60
           + VL  WL++V  + + +    F D   L   +++     +  +  RTFG+WTLL+  + 
Sbjct: 5   LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIR 64

Query: 61  ILCAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFA 108
            LCA ++ NK +Y  T  +F+ ALGHFL+E  +Y T +     T+G+ A
Sbjct: 65  CLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAA----PTIGVLA 109

[Close]

BLAST of Cucsat.G13550 vs. ExPASy Swiss-Prot
Match: Q5R589 (Ergosterol biosynthetic protein 28 homolog OS=Pongo abelii OX=9601 GN=ERG28 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08
Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNA--TMTEVHGRTFGVWTLLTCTLC 60
           + VL  WL++V  + + +    F D   L   +++     +  +  RTFG+WTLL+  + 
Sbjct: 5   LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIR 64

Query: 61  ILCAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFA 108
            LCA ++ NK +Y  T  +F+ ALGHFL+E  +Y T +     T+G+ A
Sbjct: 65  CLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAA----PTIGVLA 109

[Close]

BLAST of Cucsat.G13550 vs. ExPASy Swiss-Prot
Match: Q9ERY9 (Ergosterol biosynthetic protein 28 homolog OS=Mus musculus OX=10090 GN=Erg28 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.3e-08
Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNA--TMTEVHGRTFGVWTLLTCTLC 60
           + VL  WL++V  + + +    F D   L   +++     +  +  RTFG+WTLL+  + 
Sbjct: 5   LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIR 64

Query: 61  ILCAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFA 108
            LCA ++ NK +Y  T  +F+ ALGHFL+E  ++ T +     TVG+ A
Sbjct: 65  CLCAIDIHNKTLYHITLWTFLLALGHFLSELFVFGTAA----PTVGVLA 109

[Close]

BLAST of Cucsat.G13550 vs. ExPASy Swiss-Prot
Match: O74820 (Ergosterol biosynthetic protein 28 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=erg28 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.5e-06
Identity = 27/84 (32.14%), Postives = 46/84 (54.76%), Query Frame = 0


Query: 33  VFSNAT-MTEVHGRTFGVWTLLTCTLCILCAFNLENKPIYLATFLSFIYALGHFLTEYLI 92
           V+SN   +  + GRTFG+WTLL+  +   CA+++ N  +Y     ++  A  HFL+E+L+
Sbjct: 41  VYSNTNEVNGLQGRTFGIWTLLSAIVRFYCAYHITNPDVYFLCQCTYYLACFHFLSEWLL 100

Query: 93  YHTMSIANLTTVGIFAGTSIIWML 116
           + T ++       I   T  IW +
Sbjct: 101 FRTTNLGPGLLSPIVVSTVSIWFM 124

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BLAST of Cucsat.G13550 vs. NCBI nr
Match: XP_004136234.2 (ergosterol biosynthetic protein 28 [Cucumis sativus] >KGN60452.2 hypothetical protein Csa_002520 [Cucumis sativus])

HSP 1 Score: 265 bits (678), Expect = 1.42e-89
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL
Sbjct: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120

Query: 121 HQRVHPKHS 129
           HQRVHPKHS
Sbjct: 121 HQRVHPKHS 129

[Close]

BLAST of Cucsat.G13550 vs. NCBI nr
Match: XP_008466094.1 (PREDICTED: ergosterol biosynthetic protein 28 [Cucumis melo])

HSP 1 Score: 263 bits (671), Expect = 1.67e-88
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTFGVWTLLTCTLCIL
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120

Query: 121 HQRVHPKHS 129
           HQRVHPKHS
Sbjct: 121 HQRVHPKHS 129

[Close]

BLAST of Cucsat.G13550 vs. NCBI nr
Match: XP_038897284.1 (ergosterol biosynthetic protein 28 [Benincasa hispida])

HSP 1 Score: 260 bits (664), Expect = 1.95e-87
Identity = 124/129 (96.12%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTFGVWTLLTCTLCIL
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLEN+PIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWN+
Sbjct: 61  CAFNLENRPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120

Query: 121 HQRVHPKHS 129
           HQR+HPKHS
Sbjct: 121 HQRIHPKHS 129

[Close]

BLAST of Cucsat.G13550 vs. NCBI nr
Match: XP_022981077.1 (ergosterol biosynthetic protein 28 [Cucurbita maxima] >XP_022981078.1 ergosterol biosynthetic protein 28 [Cucurbita maxima] >XP_023525018.1 ergosterol biosynthetic protein 28 [Cucurbita pepo subsp. pepo] >XP_023525019.1 ergosterol biosynthetic protein 28 [Cucurbita pepo subsp. pepo] >XP_023525020.1 ergosterol biosynthetic protein 28 [Cucurbita pepo subsp. pepo] >KAG7031741.1 Ergosterol biosynthetic protein 28 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 259 bits (662), Expect = 3.93e-87
Identity = 124/129 (96.12%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTFGVWTLLTCTLCIL
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLENKPIYLATFLSFIYALGHFLTE+LIYHTMSIANLTTVGIFAGTSIIWMLLQWN+
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120

Query: 121 HQRVHPKHS 129
           HQR+HPKHS
Sbjct: 121 HQRIHPKHS 129

[Close]

BLAST of Cucsat.G13550 vs. NCBI nr
Match: XP_022941308.1 (ergosterol biosynthetic protein 28 [Cucurbita moschata] >XP_022941309.1 ergosterol biosynthetic protein 28 [Cucurbita moschata])

HSP 1 Score: 258 bits (659), Expect = 1.13e-86
Identity = 123/129 (95.35%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTFGVWTLLTCTLCI+
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLENKPIYLATFLSFIYALGHFLTE+LIYHTMSIANLTTVGIFAGTSIIWMLLQWN+
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120

Query: 121 HQRVHPKHS 129
           HQR+HPKHS
Sbjct: 121 HQRIHPKHS 129

[Close]

BLAST of Cucsat.G13550 vs. ExPASy TrEMBL
Match: A0A1S3CQG2 (ergosterol biosynthetic protein 28 OS=Cucumis melo OX=3656 GN=LOC103503620 PE=3 SV=1)

HSP 1 Score: 263 bits (671), Expect = 8.06e-89
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTFGVWTLLTCTLCIL
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120

Query: 121 HQRVHPKHS 129
           HQRVHPKHS
Sbjct: 121 HQRVHPKHS 129

[Close]

BLAST of Cucsat.G13550 vs. ExPASy TrEMBL
Match: A0A6J1ISZ4 (ergosterol biosynthetic protein 28 OS=Cucurbita maxima OX=3661 GN=LOC111480332 PE=3 SV=1)

HSP 1 Score: 259 bits (662), Expect = 1.90e-87
Identity = 124/129 (96.12%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTFGVWTLLTCTLCIL
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLENKPIYLATFLSFIYALGHFLTE+LIYHTMSIANLTTVGIFAGTSIIWMLLQWN+
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120

Query: 121 HQRVHPKHS 129
           HQR+HPKHS
Sbjct: 121 HQRIHPKHS 129

[Close]

BLAST of Cucsat.G13550 vs. ExPASy TrEMBL
Match: A0A0A0LGZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G894520 PE=3 SV=1)

HSP 1 Score: 259 bits (661), Expect = 2.70e-87
Identity = 127/129 (98.45%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTF  WTLLTCTLCIL
Sbjct: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFIGWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120

Query: 121 HQRVHPKHS 129
           HQRVHPKHS
Sbjct: 121 HQRVHPKHS 129

[Close]

BLAST of Cucsat.G13550 vs. ExPASy TrEMBL
Match: A0A6J1FRR3 (ergosterol biosynthetic protein 28 OS=Cucurbita moschata OX=3662 GN=LOC111446648 PE=3 SV=1)

HSP 1 Score: 258 bits (659), Expect = 5.46e-87
Identity = 123/129 (95.35%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MK+LGWWLMLVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTFGVWTLLTCTLCI+
Sbjct: 1   MKLLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIV 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLENKPIYLATFLSFIYALGHFLTE+LIYHTMSIANLTTVGIFAGTSIIWMLLQWN+
Sbjct: 61  CAFNLENKPIYLATFLSFIYALGHFLTEHLIYHTMSIANLTTVGIFAGTSIIWMLLQWNA 120

Query: 121 HQRVHPKHS 129
           HQR+HPKHS
Sbjct: 121 HQRIHPKHS 129

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BLAST of Cucsat.G13550 vs. ExPASy TrEMBL
Match: A0A6J1BW88 (ergosterol biosynthetic protein 28 OS=Momordica charantia OX=3673 GN=LOC111005292 PE=3 SV=1)

HSP 1 Score: 252 bits (643), Expect = 1.51e-84
Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MKVLGWWLMLVGSLRLASVWFGFFDIWALRLAVFSNATMTEVHGRTFGVWTLLTCTLCIL 60
           MK LGWWL+LVGSLRLASVWFGFFDIWALRLAVFSN TMTEVHGRTFGVWTLLTCTLCIL
Sbjct: 1   MKPLGWWLLLVGSLRLASVWFGFFDIWALRLAVFSNTTMTEVHGRTFGVWTLLTCTLCIL 60

Query: 61  CAFNLENKPIYLATFLSFIYALGHFLTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNS 120
           CAFNLEN+PIYLATFLSFIYALGHF TEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWN 
Sbjct: 61  CAFNLENRPIYLATFLSFIYALGHFSTEYLIYHTMSIANLTTVGIFAGTSIIWMLLQWNV 120

Query: 121 HQRVHPKHS 129
           HQR HPKHS
Sbjct: 121 HQRNHPKHS 129

The following BLAST results are available for this feature:

BLAST of Cucsat.G13550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80594	1.1e-57	82.95	Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana OX=3702 GN=At1g10030 ...	[more]
Q9UKR5	2.8e-08	33.03	Ergosterol biosynthetic protein 28 homolog OS=Homo sapiens OX=9606 GN=ERG28 PE=1...	[more]
Q5R589	2.8e-08	33.03	Ergosterol biosynthetic protein 28 homolog OS=Pongo abelii OX=9601 GN=ERG28 PE=2...	[more]
Q9ERY9	6.3e-08	33.03	Ergosterol biosynthetic protein 28 homolog OS=Mus musculus OX=10090 GN=Erg28 PE=...	[more]
O74820	3.5e-06	32.14	Ergosterol biosynthetic protein 28 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of Cucsat.G13550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136234.2	1.42e-89	100.00	ergosterol biosynthetic protein 28 [Cucumis sativus] >KGN60452.2 hypothetical pr...	[more]
XP_008466094.1	1.67e-88	98.45	PREDICTED: ergosterol biosynthetic protein 28 [Cucumis melo]	[more]
XP_038897284.1	1.95e-87	96.12	ergosterol biosynthetic protein 28 [Benincasa hispida]	[more]
XP_022981077.1	3.93e-87	96.12	ergosterol biosynthetic protein 28 [Cucurbita maxima] >XP_022981078.1 ergosterol...	[more]
XP_022941308.1	1.13e-86	95.35	ergosterol biosynthetic protein 28 [Cucurbita moschata] >XP_022941309.1 ergoster...	[more]

BLAST of Cucsat.G13550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQG2	8.06e-89	98.45	ergosterol biosynthetic protein 28 OS=Cucumis melo OX=3656 GN=LOC103503620 PE=3 ...	[more]
A0A6J1ISZ4	1.90e-87	96.12	ergosterol biosynthetic protein 28 OS=Cucurbita maxima OX=3661 GN=LOC111480332 P...	[more]
A0A0A0LGZ9	2.70e-87	98.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G894520 PE=3 SV=1	[more]
A0A6J1FRR3	5.46e-87	95.35	ergosterol biosynthetic protein 28 OS=Cucurbita moschata OX=3662 GN=LOC111446648...	[more]
A0A6J1BW88	1.51e-84	94.57	ergosterol biosynthetic protein 28 OS=Momordica charantia OX=3673 GN=LOC11100529...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005352	Erg28	PFAM	PF03694	Erg28	coord: 3..100 e-value: 1.7E-26 score: 92.8
IPR005352	Erg28	PANTHER	PTHR15451	ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED	coord: 1..110
None	No IPR available	PANTHER	PTHR15451:SF23	BNAA08G26030D PROTEIN	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13550.T3	Cucsat.G13550.T3	mRNA
Cucsat.G13550.T5	Cucsat.G13550.T5	mRNA
Cucsat.G13550.T4	Cucsat.G13550.T4	mRNA
Cucsat.G13550.T8	Cucsat.G13550.T8	mRNA
Cucsat.G13550.T1	Cucsat.G13550.T1	mRNA
Cucsat.G13550.T2	Cucsat.G13550.T2	mRNA
Cucsat.G13550.T10	Cucsat.G13550.T10	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030674	protein-macromolecule adaptor activity