Cucsat.G13222 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G13222
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	NUC173 domain-containing protein
Location	ctg1838: 2651983 .. 2667146 (+)
RNA-Seq Expression	Cucsat.G13222
Synteny	Cucsat.G13222

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCCGCAAATTAGAATTACGATTAATCGTTGGGATGTTAGTGCTGGGGAGTTTTTAAAAAAAAATTGAAAAAGAAAAAGTATGTTTTGAGCATCATTCGAACTTGAAAGTCGGAGTTACTTTAATCAAACAAAATCTTCCTGTTTGAGCAAAAAATGGGTTTAAACGGTTACGCACGAAGCCCCAGAGAGGCTTTCCATTTTTAAATTCAGGCTCAAAAACTTCTCCACAGTCCTAGCCTAGAAGGGTTTCTCTCGATTCTCTTCAACATCCCTTCCGGTCAATACTCTCCTTCCTCCCCAGAATGAGGTATTTTCTGTTAATTTTACTGTTTCTTCATATGTTTCAGTACGTGTATTCGATTCTCTAGCTTTTATTGCACCGTTTTTAGCTATTTCTGATTCCGATTTTTCGCCCCTTTTACTTTCCTATGTAGTCTTCTTTTTTTCCCAGTTAAATCATGCCATTGTTTGTTTCTTTCTTTTTTAACTTCTTTGAGATGAAAGAATGTGAAAATTTCCATTCCTTCAACCTGGGTTTTTCTTTAATTTTTTAGATAAATTGGTTTTGTTTTGTTTATTGGATCGATTGCTGGTAGAAGATGTTGTCGCAATCTATTTGAATGAGTGCGAGGGTGGTAAATGTGGGTCAGCATGGATAGAGTTGAGGTTTTGATTGCCTTGATGGATGAAGGCAATAGTTAAGTCATCACCGATTCACCATAGTTTTTCTCGTGTATGCAGTAGTCGTAATCCTGAAGTTCTATGGGCTCAGCGTTCGGATAAGGTTTATCTGACCGTTTCTTTACCGGATGCCAAAGATATTTCTGTCAAGTGTGAACCTCATGGGTTATTTAGCTTCTCTGCAAAGGGGTTGCAGGGTTCATCTTTTGACTTCACTTTGGAACTCTTTGGCTCCATTGTGCCTGAGGTGAGTCATTGACTAACTTTTGATGCACTTCTTTATTCTGTTTAGACCGTGTATAGACTGACCTTGGTGCGTTCATTATATTGATCGTATTACATATCTAGTAGTTTCTTATTCTCCTAGCAAGAATGACATATAACAGCATGACAATCAGCTTTAAACATTAAGCTAAATCAGGCAGAGTAGAAACTTAAGTAGCACTCTTACTCTGCTGGCTTAACATTACTTTATATTTATGCGGCAGCTTTCTCTTTGTTTGATACAGGGCTGTAAAACTAAGGTTAGCTTGAGGAACATAATTTGCTCCATCCAAAAAGAACAAAAAGGTTGGTGGAAAAGGCTCTTGAAAACAGAAGAAAAACCTGCTCCATACTTGAAGGTTGACTGGAACAAATGGTGTGATGAGGATGAGTCAGACTGTAAGTTCTTATCTATATTATAGATGCTCTTAAACACCTTAGGAAATGTAGATAGAATACACAAAAAGGGAAGAACCTCAGTTCTAAAGGAAGTTACATTAAAACTTTACAAATTACAATTACATAAAAGTTTATCGAACTATAATTTGTGAAATTCCAGAAGAAGCCGAACAAGTTCTCCATTTCTTTCTTGAAAGGATCGGCCAACAATTGATAGGAAAACATCCAATTTGAGCTTCTTCTTTTTGTTTTCAACAATCTAAGATTTCCAACCTTACACATAAAAGAAATCACTGCCCTTTTTTCTGGCCTTATTCGTTACTGCTTTACTTAACATTTAACTACTTGAATTTTCCAACCTTCCATGGCAGATATCCTGCATTGAAAATATTCTAAATTCCCTTGAAATAATTTTATAACAGTGGTTTATGATGGAAGTGCCCGGGAATATTGTCAGGAATAGTATAAATTAGAAATGACAATGTGGCGTATTTATAATCACTTACATGCTGGTTTGTGTTGAAATTTATGTAAAGATGAAGTTGGGTTTGGGTAGGCAGAATTTTGAAGATTAGTTTCCGTTGGAGAGAGATAGCTCTATTTAAATGCTATACTAGTATACTTTTTCAGTCTCTCTCTTTTATCAACATACAATTCCATTATTTTCTTATCCCCAGCCCTAAGATTGGCATCCTTAGCAGATTTAGCTCTGCTTCTGTTTACTTAAATATGAAACTGTCATCCATGCTATTCCATTACCGTTTGGCTATGCTATTTGTCAAGTTTAACTCAGCGCTTTCAAAGTTCTTTGAAGTAGAACTTTGATCTTGCATGGCATATTTCTAATACTCGAGTTCTAACAGTATAACTGATTTTGCAGCCGCTTTGACTTCTGATGACGAACTTGAAGTAAGTTGATTCCATTTATTTCCCATTTGTTCTAGTCTATAGTTAGGCAAAAATTTAAGTTGGCTTACACAAGCTATGTAAATAATTTTCTGTAGTATATGGGCCAAGATGATGGAAGTGGCGAGGATGGAGGAATGCTTTGTAAGTCCTCTTCAACCATATTATCTAGTTTCTTATAAATCTTACATTGTTTAACCATGAAAGAAATTCAATCTCAATAACTAATAACTAACTAAGAGGTCATGAGTCCAATCTATGGTGGCCACCTAGCTATGAATTAATTTTTTACGAGTTGTCTCGTGAGAGTAGTCGAGGGTGTGCGTGCGTAAGTTGACCTGGACAGTCACGGATATATATATAAAATGTTTGAAAAACTTAGTAACTTTAATTGTTATATGAAATTAACTTTAAAGTGATCAAAGAAAATCTTTAAAATATATAACAAGAAACAAAAGGTTGTAATTATTAGAATAGCTTGTGAATATGAATATAGCATACACATGTATTATTTTATTCACTTAAAAAAAAATACAACTAAAAAATGCAAGTTGTAATTTTTTTATTACAAATATTTTTTTTAAAAAATGTTATTAAACTAGAAGGTACCAAACATACCCTTAAAACTTGAGTACTATAAGTTCTTGCAGGGCTCTTTCATCGTTTTTGGTTTTCTTAAATCCTCATTCAACATGTGAATGATGGATAGATCATTTGGCAAAGTATGAAATATGAAAATCCTAAGCTGATTTAAGGTATTTACACTCCTTTTTCCACGTGGAATTGATAACAATAAAAGTATAGTTACATAAAAAATTAGACAAAGTGCTTCATGTCCATGAAGAATCATGGTGCCTGGTCAGCTCTCTTTCAAATCAGGCCTTCTCCTAAAACAAATCCTTTGTGATTTCTTTCACACTATAACCCTACATAGATGCTTTGATTGCAGTAACCTAGTTTTAAATGATTTTTTAATTTTAGTTCTCTATTTTCCAAAAGCACACAGCATACTTAATTTTTGACCATTTCTTTATTTCTCTCTTTTCCAAATTACATCCTGAAAATTCTGGCTGGTTTGTTTTTTAAATTTTTCTTAAAAAGTAAACAATGATACAGAGGCATTGTTTGTAAATAAGTGTATTATCTCGTAAAGGCAGAATGATTAACATATGTAAATGGGTAATAATGTTCTACTTCTTATTGACACTACTTGACAGATCTTCCAGACTTGGAAAAGGCAAGAGGAAACTAGGAAAGGGGGCTGTAAATAGCCAACAACTTAGAAGGTGAAGTTTGTATAGTAATAGCCCAGAACAATTAGATTACTTTCTCGATTGAGTTCTGTATCAAATCTGATTGGTGCCGATAAAGCTGTCTAAACTTGGCATTTTTAAGCTGCACTTATACATTCGTCTGCTCTCTCATTAGCTGATTTTGCAGCCTTGTTCATCAATTTCTCCTTTCGTTTTTTCATATATTCATAAACCTTCCTTTACATTTTAACTTCGAAATTTTGTCTATTTTCTGCTATTGTGTTTTACAGCACGATATGATACCAATATTGGTTTGATGTTAGCTTAGCAGTAGAGGGGGTGTGTGT

Coding sequence (CDS)

ATGAGTAGTCGTAATCCTGAAGTTCTATGGGCTCAGCGTTCGGATAAGGTTTATCTGACCGTTTCTTTACCGGATGCCAAAGATATTTCTGTCAAGTGTGAACCTCATGGGTTATTTAGCTTCTCTGCAAAGGGGTTGCAGGGTTCATCTTTTGACTTCACTTTGGAACTCTTTGGCTCCATTGTGCCTGAGGGCTGTAAAACTAAGGTTAGCTTGAGGAACATAATTTGCTCCATCCAAAAAGAACAAAAAGGTTGGTGGAAAAGGCTCTTGAAAACAGAAGAAAAACCTGCTCCATACTTGAAGGTTGACTGGAACAAATGGTGTGATGAGGATGAGTCAGACTCCGCTTTGACTTCTGATGACGAACTTGAATATATGGGCCAAGATGATGGAAGTGGCGAGGATGGAGGAATGCTTTATCTTCCAGACTTGGAAAAGGCAAGAGGAAACTAG

Protein sequence

MSSRNPEVLWAQRSDKVYLTVSLPDAKDISVKCEPHGLFSFSAKGLQGSSFDFTLELFGSIVPEGCKTKVSLRNIICSIQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESDSALTSDDELEYMGQDDGSGEDGGMLYLPDLEKARGN

Homology

[Close]

BLAST of Cucsat.G13222 vs. ExPASy Swiss-Prot
Match: Q6P5B0 (RRP12-like protein OS=Mus musculus OX=10090 GN=Rrp12 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 4.7e-22
Identity = 141/611 (23.08%), Postives = 269/611 (44.03%), Query Frame = 0


Query: 24  LTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSILHSESLPLTPAAYFAAAISAIDNA 83
           L+D T++    ++R+ +S++  H+ + A   A+  ++ S+    T   YFAA ++ ++  
Sbjct: 99  LSDCTNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAV 158

Query: 84  SASDTLDPTALSALLSFLAIALPLVLPGGISAPNASEAAGVLVVLLGMKNLTVST--VRA 143
            +     P +L+A+   L + L  V P  +     S+ +   + ++  +  + ST  +R 
Sbjct: 159 ES-----PESLAAVAYLLNLVLKRV-PSPVLMKKFSDTSKAFMDIMSAQASSGSTSALRW 218

Query: 144 AVKCLGILLGFCNLEDWA---SVELGFDTLLKFSVDRRPKVRRCAQESLITFLNSLKHSA 203
            + CL ILL   +LE W    ++++ +  LL F+V  +PK+R+ AQ  + + L       
Sbjct: 219 VLSCLAILLRKQDLEAWGYPITLQV-YHGLLSFTVHAKPKIRKAAQHGVCSVL------- 278

Query: 204 IKKQASSLVFSLLKSCMPSAVKLS--TITPVDGPGEDKQSHAQHLDVLHKLNVIILTIPL 263
             K +  +      +  P+AV  +   I  ++  G  K++       LH L ++   +P 
Sbjct: 279 --KGSDFMFGEKAPAHHPAAVSTAKFCIQEIEKSGGSKEA----TTTLHMLTLLKDMLPC 338

Query: 264 LSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLIL--KSSKTGVPALEVESIIVAIGSY 323
             + +     + L+++++    +VTA + +A   +   K S + + A     I+ A+  Y
Sbjct: 339 FPEGLVKSCSETLLRVMTLNHVLVTACAMQAFHNLFHAKPSPSTLSAELNAQIVTALYDY 398

Query: 324 L-SSGDKNPLDTVLSA-----ITLLKCAMDAGGSSVAK-KNLPVVCGYMAGLLTSDVSKA 383
           + S  D  PL   L       I L++   D G   +A+     V C     LL+     A
Sbjct: 399 VPSENDLQPLLAWLKVMEKAHINLVRLQRDLGLGHLARFFGTAVTC-----LLSPHSQVA 458

Query: 384 VHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEV----QAIKSTCAICEDVLNS 443
             A+  +KE++     +EC+        H+ D            Q I       E+ L  
Sbjct: 459 AAATQTLKEIL-----KECVA------PHIADIGSVTSSASGPPQYITKMFRAVEEGLTY 518

Query: 444 CDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNID--NNCIGSAVT 503
                   +L ++   F   G  +   MK  L  L DL  ++ +  +    +  +G+AVT
Sbjct: 519 KFHAAWSSVLQLLGVFFEACGKQAHPVMKKCLQSLCDL-RLSPHFPHTAALDQAVGAAVT 578

Query: 504 AMGPEKILTLIPISINPGDSTVQ--NMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDES 563
           +MGPE +L  +P+ I+  + T+     WL+PV+  HV    LG++  Y +PLA + + ++
Sbjct: 579 SMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVRETRLGFFTTYFLPLATTLKRKA 638

Query: 564 CKVKKIAA---CKNLQTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHED 608
             + +  +    K   T    +W LLP FC  P+D+      L+  L T + E   +   
Sbjct: 639 MDLAQAGSTVESKIYDTLQWQIWTLLPGFCTRPTDVAASFKGLARTLGTAINERPDLRVT 672

[Close]

BLAST of Cucsat.G13222 vs. ExPASy Swiss-Prot
Match: Q5JTH9 (RRP12-like protein OS=Homo sapiens OX=9606 GN=RRP12 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 8.0e-22
Identity = 140/611 (22.91%), Postives = 271/611 (44.35%), Query Frame = 0


Query: 24  LTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSILHSESLPLTPAAYFAAAISAIDNA 83
           L+D T++    ++R+ +S++  H+ + A   A+  ++ S+    T   YFAA ++ ++  
Sbjct: 99  LSDCTNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAV 158

Query: 84  SASDTLDPTALSALLSFLAIALPLVLPGGISAPNASEAAGVLVVLLGMKNLTVST--VRA 143
            +     P +L+A+   L + L  V P  +     S+ +   + ++  +  + ST  +R 
Sbjct: 159 ES-----PESLAAVAYLLNLVLKRV-PSPVLIKKFSDTSKAFMDIMSAQASSGSTSVLRW 218

Query: 144 AVKCLGILLGFCNLEDWA-SVELG-FDTLLKFSVDRRPKVRRCAQESLITFLNSLKHSAI 203
            + CL  LL   +LE W   V L  +  LL F+V  +PK+R+ AQ  + + L        
Sbjct: 219 VLSCLATLLRKQDLEAWGYPVTLQVYHGLLSFTVHPKPKIRKAAQHGVCSVL-------- 278

Query: 204 KKQASSLVFSLLKSCMPSAVKLS--TITPVDGPGEDKQSHAQHLDVLHKLNVIILTIPLL 263
             + S  +F    +  P+A+  +   I  ++  G  K++       LH L ++   +P  
Sbjct: 279 --KGSEFMFEKAPAHHPAAISTAKFCIQEIEKSGGSKEA----TTTLHMLTLLKDLLPCF 338

Query: 264 SKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVPALEVE---SIIVAIGSY 323
            + +     + L+++++    +VTA + +A   +   ++ G+  L  E    II A+  Y
Sbjct: 339 PEGLVKSCSETLLRVMTLSHVLVTACAMQAFHSLF-HARPGLSTLSAELNAQIITALYDY 398

Query: 324 L-SSGDKNPLDTVLSA-----ITLLKCAMDAGGSSVAKKNLPVVCGYMAGLLTSDVSKAV 383
           + S  D  PL   L       I L++   D G       +LP   G     L S  S+ +
Sbjct: 399 VPSENDLQPLLAWLKVMEKAHINLVRLQWDLG-----LGHLPRFFGTAVTCLLSPHSQVL 458

Query: 384 HASS-VVKELIQDYVDQECLIALIDKDSHLED----CNLENIEVQAIKSTCAICEDVLNS 443
            A++  +KE++     +EC+        H+ D     +  +   Q++       E+ L  
Sbjct: 459 TAATQSLKEIL-----KECVA------PHMADIGSVTSSASGPAQSVAKMFRAVEEGLTY 518

Query: 444 CDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNID--NNCIGSAVT 503
                   +L ++   F   G  +   M+  L  L DL  ++ +  +    +  +G+AVT
Sbjct: 519 KFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDL-RLSPHFPHTAALDQAVGAAVT 578

Query: 504 AMGPEKILTLIPISINPGDSTVQ--NMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDES 563
           +MGPE +L  +P+ I+  + T+     WL+PV+  HV    LG++  Y +PLA + + ++
Sbjct: 579 SMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVQETRLGFFTTYFLPLANTLKSKA 638

Query: 564 CKVKKIAA---CKNLQTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHED 608
             + +  +    K   T    +W LLP FC  P+D+      L+  L   + E   +   
Sbjct: 639 MDLAQAGSTVESKIYDTLQWQMWTLLPGFCTRPTDVAISFKGLARTLGMAISERPDLRVT 671

[Close]

BLAST of Cucsat.G13222 vs. ExPASy Swiss-Prot
Match: Q5ZKD5 (RRP12-like protein OS=Gallus gallus OX=9031 GN=RRP12 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.8e-21
Identity = 146/629 (23.21%), Postives = 268/629 (42.61%), Query Frame = 0


Query: 7   GNQQLQESEKDDAEAVV----------LTDATDICAQLMERYAKSSAPQHRHLLASAVAM 66
           G+ QL   E D  EA            L+D T++    ++R+ +S++  H+ + A   A+
Sbjct: 74  GSSQLPMEEGDAGEAATERSSGTFLSGLSDCTNVTFSRVQRFWESNSAAHKEICAVLAAV 133

Query: 67  RSILHSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAP 126
             ++ S+    T   YFAA ++ ++   +     P +++A+   L + L  V P  +   
Sbjct: 134 TDVIRSQGGKETETEYFAALMTTLEAVDS-----PESVAAVAYLLNLVLKRV-PSPVLIK 193

Query: 127 NASEAAGVLVVLLGMKNLTVST--VRAAVKCLGILLGFCNLEDWA-SVELG-FDTLLKFS 186
             S+A+   + ++  +  + ST  +R  + CL  LL   +L  W+  V L  +  LL F 
Sbjct: 194 KFSDASKAFMNIISSQACSGSTSALRWVLSCLATLLRKQDLAAWSYPVTLQVYHGLLSFC 253

Query: 187 VDRRPKVRRCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGE 246
           V  +PKVR+ AQ  + + L   +     +              PS+ K   +  ++  G 
Sbjct: 254 VHTKPKVRKAAQHGVCSVLRGSEFMFGDEAPEH------HPAAPSSAKF-CVQEIEKAGG 313

Query: 247 DKQSHAQHLDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLIL 306
            K++       LH L ++   +P     V     + L+++++    +VTA + +A   + 
Sbjct: 314 TKEA----TTTLHVLALLRDLLPCFPAAVLKTCCETLLRVMTLSHVLVTACAMQAFHSLF 373

Query: 307 KSS--KTGVPALEVESIIVAIGSYL-SSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNL 366
            +    + +PA     II A+  Y+ S+ D  PL T L+ +      +      +   +L
Sbjct: 374 SAQPRTSCLPAELNAQIITALYDYVPSANDLQPLLTWLTTMERAHVNLGRLQKDLCWAHL 433

Query: 367 PVVCGYMAGLLTSDVSKAVHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQA 426
           P +         S   + V A++   E + +    EC+   +D+        L N+    
Sbjct: 434 PRLFSATMNCFLSPHLQVVAAAAQTLETLLN----ECIAPHMDE--------LGNVSAST 493

Query: 427 IKSTCAICEDVLNSCDGDLGKY------ILDVISALFLKLGTTSIIYMKHILLKLADL-M 486
                 +C+   +  +G   ++      +L V+   F   G      M+  L  L DL +
Sbjct: 494 PAPGSYLCKMFRSVEEGLTYRFHAAWDGVLQVLEVFFEVCGKQCHPIMRKCLQSLCDLRL 553

Query: 487 NIAGNLSNIDNNCIGSAVTAMGPEKILTLIPISINPGDSTVQ--NMWLIPVLHSHVVGAS 546
           +     +   +  +G+AV AMGPE +L  +P+ I+  + T+     WL+PVL  +V GA 
Sbjct: 554 SPHFPYTTEVDQAVGAAVGAMGPEVLLEAVPLQIDGKEETLDFPRSWLLPVLRDYVQGAR 613

Query: 547 LGYYLEYIVPLA---KSFQDESCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRMG 606
           LG++  Y +PLA   KS   E  +  K    K   T    +W LLP FC  P+D+     
Sbjct: 614 LGFFTSYFLPLAATLKSRALEFAQAGKSLESKIYDTLQWQVWTLLPGFCTRPTDVVEAFK 673

[Close]

BLAST of Cucsat.G13222 vs. ExPASy Swiss-Prot
Match: Q9VYA7 (RRP12-like protein OS=Drosophila melanogaster OX=7227 GN=CG2691 PE=1 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 4.1e-18
Identity = 133/567 (23.46%), Postives = 247/567 (43.56%), Query Frame = 0


Query: 28  TDICAQLMERYAKSSAPQHRHLLASAVAMRSILHSESLPLTPAAYFAAAISAIDNASASD 87
           ++ C Q +    +SS+  H+ +LA   A+  I+       +   YF   +  I+ A+   
Sbjct: 125 SNTCFQKLVTSFRSSSALHKEMLAILSALTEIIRENGGGESSTEYFLLLMEQIEAAT--- 184

Query: 88  TLDPTALSALLSFLAIALPLVLPGGISAPNASEAAGVLVVLLG--MKNLTVSTVRAAVKC 147
             +   + A ++ LA+ +  V P  +     ++ A  +  LL   M++   S +R  + C
Sbjct: 185 --EERDIVAGVTLLAMGINSV-PAPVLKKRFAQTADTMQRLLQRFMESTNQSVIRHVIGC 244

Query: 148 LGILLGFCNLEDW--ASVELGFDTLLKFSVDRRPKVRRCAQESLITFLNS--LKHSAIKK 207
           L ++L   +   W  +S    FD +L FS+  +PK+R+ AQ ++   ++       AIK 
Sbjct: 245 LSVILRAQDYAAWSYSSTFQYFDAILAFSIHSQPKIRKAAQHAIALIIHGSCFMLPAIKS 304

Query: 208 QASSLVFSLLKSCM---PSAVKLSTITPVDGPGEDKQSHAQHLDVLHKLNVIILTIPLLS 267
             + +  ++ +  +   P++ +++         E   ++AQ   VLH L ++  T+    
Sbjct: 305 DDNEMDEAVEQPKVKHHPASSRVAKFCLAQFKPE-VLANAQ-TTVLHTLELLKDTLYGFK 364

Query: 268 KRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVPALEVESIIVAIGSYLSSG 327
                 + + L+ +++    +V  + F+ +  +       + A     ++ AI  Y    
Sbjct: 365 TEDIRSVCEHLLSIMTAANVLVRTNCFQTLYSLFLKKSPNLNASLCAKLLAAIHEY--RP 424

Query: 328 DKNPLDTVLSAITLLK------CAMDAGGSSVAKKNLPVVCGYMAGLLTSDVSKAV-HAS 387
           DK+ +   ++ +T+LK        M       A   L  VC     L  SD  + V   S
Sbjct: 425 DKSDIRQTIAWVTVLKEGHLHLATMQLDLCMQALPRLIDVC--TTDLWLSDQKELVAGVS 484

Query: 388 SVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAICEDVLNSCDGDLGKY 447
           + +KEL+QD V + C  A        ED        Q++    A    +LN+  G++ ++
Sbjct: 485 NCIKELLQDCVSRACATA--------EDAQCNR---QSVSRIIASLHKMLNAPFGEISRF 544

Query: 448 ILDVISALFLKLGTTSIIYMKHILLKLADLMNI-AGNLSNIDNNCIGSAVTAMGPEKILT 507
           ++ + S +F   G      +   L+ +    +  + +   I++  I SA+ A+GPE +LT
Sbjct: 545 VILIFSFVFEACGKLFGSELTPPLMTICKRYDTQSAHRLQIEHTVI-SAIKALGPELVLT 604

Query: 508 LIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDESCKVKKIAACKN 567
            IP++   G   ++  WL+P+L     GASL ++ E IV LA    D   K K+ A  KN
Sbjct: 605 AIPLADGKGVMQLERSWLLPLLREGANGASLQFFKEKIVALA---MDCQLKWKEFAEAKN 664

Query: 568 ------LQTCARNLWKLLPAFCRHPSD 572
                  +     LW L P FCR P D
Sbjct: 665 NSSSHIYELLCCQLWGLFPGFCRQPRD 664

[Close]

BLAST of Cucsat.G13222 vs. ExPASy Swiss-Prot
Match: Q9C0X8 (Putative ribosomal RNA-processing protein 12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp12 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.8e-13
Identity = 66/223 (29.60%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 435 VISALFLKLGTTSIIYMKHILLKLADLMNIAG-NLSNIDNNCIGSAVTAMGPEKILTLIP 494
           +IS+L  KLG  S  Y+   L  +  L    G +   + +  IGS V A+GPE +L ++P
Sbjct: 389 IISSLCDKLGPHSDPYLIPALEVIDYLRGSEGFDGKALVDEAIGSFVRAIGPEAMLRVLP 448

Query: 495 ISINPGD-STVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDESCKVKKIAA--CKN 554
           +++   D   V   WL+PVL  ++  A+L ++  Y VPL+     +  ++  + +   K 
Sbjct: 449 LNLELNDKDAVGRAWLLPVLRDNIRFANLAHFTNYFVPLSGQLYQKVIEMNDLDSIPSKL 508

Query: 555 LQTCARNLWKLLPAFCRHPSDMHRRMGM-LSELLITLLKEDSFMHEDIAAALQVLVNQNA 614
           LQT    +W LLP +C  P D+     +  + +L+ +L E   +   I  +L  LV  N+
Sbjct: 509 LQTLVDQIWSLLPGYCYLPLDLQSSFTLEFASILVNVLYEQVSLRSVICNSLTALVETNS 568

Query: 615 VV----PNCNDVSV-YSKKMQSKNMKALVSCSTNLLQALAELF 648
            V    P  + +SV  S    S N+  L + S+N L  L  +F
Sbjct: 569 KVADKLPLDDVISVPVSASDASSNLAFLTNMSSNFLSVLLNVF 611

[Close]

BLAST of Cucsat.G13222 vs. NCBI nr
Match: XP_004136785.1 (RRP12-like protein [Cucumis sativus] >KGN59491.1 hypothetical protein Csa_001385 [Cucumis sativus])

HSP 1 Score: 1233 bits (3190), Expect = 0.0
Identity = 658/668 (98.50%), Postives = 659/668 (98.65%), Query Frame = 0


Query: 1   MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60
           MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL
Sbjct: 1   MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60

Query: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASE 120
           HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLV PGGISAPNASE
Sbjct: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVPPGGISAPNASE 120

Query: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180
           AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR
Sbjct: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180

Query: 181 RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQH 240
           RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLST TPVDGPGEDKQSHAQH
Sbjct: 181 RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTSTPVDGPGEDKQSHAQH 240

Query: 241 LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP 300
           LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP
Sbjct: 241 LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP 300

Query: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360
           ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL
Sbjct: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360

Query: 361 TSDVSKAVHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAICEDV 420
           TSDVSKAVHASSVVKELIQDYVDQECLIALIDKD HLEDCNLENIEVQAIKSTCAICEDV
Sbjct: 361 TSDVSKAVHASSVVKELIQDYVDQECLIALIDKDLHLEDCNLENIEVQAIKSTCAICEDV 420

Query: 421 LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDN--NCIGS 480
           LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDN  NCIGS
Sbjct: 421 LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDNLQNCIGS 480

Query: 481 AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE 540
           AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE
Sbjct: 481 AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE 540

Query: 541 SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA 600
           SCKVKKIAACKNL+TCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA
Sbjct: 541 SCKVKKIAACKNLRTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA 600

Query: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL 660
           AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL
Sbjct: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL 660

Query: 661 KVFFYCLA 666
           K    CLA
Sbjct: 661 KDAIGCLA 668

[Close]

BLAST of Cucsat.G13222 vs. NCBI nr
Match: XP_008443313.1 (PREDICTED: RRP12-like protein [Cucumis melo])

HSP 1 Score: 1198 bits (3099), Expect = 0.0
Identity = 637/668 (95.36%), Postives = 651/668 (97.46%), Query Frame = 0


Query: 1   MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60
           MKSMSEG+QQLQESEKDDAEAV LTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL
Sbjct: 1   MKSMSEGDQQLQESEKDDAEAVALTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60

Query: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASE 120
           HSESLPLTPAAYFAAAISAIDNASASDTLDPT LSALLSFLAI LPLV  GGISAPNASE
Sbjct: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTVLSALLSFLAITLPLVPHGGISAPNASE 120

Query: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180
           AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR
Sbjct: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180

Query: 181 RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQH 240
           RCAQESLITFLNSLKHSAIKK+AS+LVFSLLKSCMPSAVKLST+TPVDGP EDKQSH QH
Sbjct: 181 RCAQESLITFLNSLKHSAIKKEASNLVFSLLKSCMPSAVKLSTVTPVDGPEEDKQSHGQH 240

Query: 241 LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP 300
           LDVLH+LNVIIL IPLLSK+VRFKMLKELIKLV+PQFSIVTAHSFKAM+LILKSSKTGVP
Sbjct: 241 LDVLHRLNVIILAIPLLSKKVRFKMLKELIKLVNPQFSIVTAHSFKAMELILKSSKTGVP 300

Query: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360
           ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL
Sbjct: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360

Query: 361 TSDVSKAVHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAICEDV 420
           TSDVSKA+HASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAI EDV
Sbjct: 361 TSDVSKALHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAIFEDV 420

Query: 421 LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDN--NCIGS 480
           L+SCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGN+SNIDN  NCIGS
Sbjct: 421 LDSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNVSNIDNLQNCIGS 480

Query: 481 AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE 540
           AVTAMGPEKILTLIPISINP DSTVQNMWLIPVLHSHVVGASL YYLEYIVPLAKSFQD+
Sbjct: 481 AVTAMGPEKILTLIPISINPSDSTVQNMWLIPVLHSHVVGASLDYYLEYIVPLAKSFQDQ 540

Query: 541 SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA 600
           SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRR+GMLSELLITLLKEDSFMHEDIA
Sbjct: 541 SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRIGMLSELLITLLKEDSFMHEDIA 600

Query: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL 660
           AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDS+PTKRSHL
Sbjct: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSLPTKRSHL 660

Query: 661 KVFFYCLA 666
           K    CLA
Sbjct: 661 KDAIGCLA 668

[Close]

BLAST of Cucsat.G13222 vs. NCBI nr
Match: KAA0053835.1 (RRP12-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1198 bits (3099), Expect = 0.0
Identity = 637/668 (95.36%), Postives = 651/668 (97.46%), Query Frame = 0


Query: 1   MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60
           MKSMSEG+QQLQESEKDDAEAV LTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL
Sbjct: 1   MKSMSEGDQQLQESEKDDAEAVALTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60

Query: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASE 120
           HSESLPLTPAAYFAAAISAIDNASASDTLDPT LSALLSFLAI LPLV  GGISAPNASE
Sbjct: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTVLSALLSFLAITLPLVPHGGISAPNASE 120

Query: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180
           AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR
Sbjct: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180

Query: 181 RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQH 240
           RCAQESLITFLNSLKHSAIKK+AS+LVFSLLKSCMPSAVKLST+TPVDGP EDKQSH QH
Sbjct: 181 RCAQESLITFLNSLKHSAIKKEASNLVFSLLKSCMPSAVKLSTVTPVDGPEEDKQSHGQH 240

Query: 241 LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP 300
           LDVLH+LNVIIL IPLLSK+VRFKMLKELIKLV+PQFSIVTAHSFKAM+LILKSSKTGVP
Sbjct: 241 LDVLHRLNVIILAIPLLSKKVRFKMLKELIKLVNPQFSIVTAHSFKAMELILKSSKTGVP 300

Query: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360
           ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL
Sbjct: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360

Query: 361 TSDVSKAVHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAICEDV 420
           TSDVSKA+HASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAI EDV
Sbjct: 361 TSDVSKALHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAIFEDV 420

Query: 421 LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDN--NCIGS 480
           L+SCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGN+SNIDN  NCIGS
Sbjct: 421 LDSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNVSNIDNLQNCIGS 480

Query: 481 AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE 540
           AVTAMGPEKILTLIPISINP DSTVQNMWLIPVLHSHVVGASL YYLEYIVPLAKSFQD+
Sbjct: 481 AVTAMGPEKILTLIPISINPSDSTVQNMWLIPVLHSHVVGASLDYYLEYIVPLAKSFQDQ 540

Query: 541 SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA 600
           SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRR+GMLSELLITLLKEDSFMHEDIA
Sbjct: 541 SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRIGMLSELLITLLKEDSFMHEDIA 600

Query: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL 660
           AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDS+PTKRSHL
Sbjct: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSLPTKRSHL 660

Query: 661 KVFFYCLA 666
           K    CLA
Sbjct: 661 KDAIGCLA 668

[Close]

BLAST of Cucsat.G13222 vs. NCBI nr
Match: TYK25565.1 (RRP12-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1103 bits (2852), Expect = 0.0
Identity = 612/755 (81.06%), Postives = 624/755 (82.65%), Query Frame = 0


Query: 1   MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60
           MKSMSEG+QQLQESEKDDAEAV LTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL
Sbjct: 1   MKSMSEGDQQLQESEKDDAEAVALTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60

Query: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASE 120
           HSESLPLTPAAYFAAAISAIDNASASDTLDPT LSALLSFLAI LPLV  GGISAPNASE
Sbjct: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTVLSALLSFLAITLPLVPHGGISAPNASE 120

Query: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180
           AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR
Sbjct: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180

Query: 181 RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQH 240
           RCAQESLITFLNSLKHSAIKK+AS+LVFSLLKSCMPSAVKLST+TPVDGP EDKQSH QH
Sbjct: 181 RCAQESLITFLNSLKHSAIKKEASNLVFSLLKSCMPSAVKLSTVTPVDGPEEDKQSHGQH 240

Query: 241 LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP 300
           LDVLH+LN                            FSIVTAHSFKAM+LILKSSKTGVP
Sbjct: 241 LDVLHRLN----------------------------FSIVTAHSFKAMELILKSSKTGVP 300

Query: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAG-- 360
           ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAG  
Sbjct: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGER 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 SESKDWNPAISASFKDLLKDRDQERVSKSQWPATEPWGSKAILEGDQIPLNKMVELAASI 420

Query: 421 -------------------------LLTSDVSKAVHASSVVKELIQDYVDQECLIALIDK 480
                                    LLTSDVSKA+HASSVVKELIQDYVDQECLIALIDK
Sbjct: 421 AFPKEIPHDLFQRGCHIPGIENKDSLLTSDVSKALHASSVVKELIQDYVDQECLIALIDK 480

Query: 481 DSHLEDCNLENIEVQAIKSTCAICEDVLNSCDGDLGKYILDVISALFLKLGTTSIIYMKH 540
           DSHLEDCNLENIEVQAIKSTCAI EDVL+SCDGDLGKYILDVISALFLKLGTTSIIYMKH
Sbjct: 481 DSHLEDCNLENIEVQAIKSTCAIFEDVLDSCDGDLGKYILDVISALFLKLGTTSIIYMKH 540

Query: 541 ILLKLADLMNIAGNLSNIDN--NCIGSAVTAMGPEKILTLIPISINPGDSTVQNMWLIPV 600
           ILLKLADLMNIAGN+SNIDN  NCIGSAVTAMGPEKILTLIPISINP DSTVQNMWLIPV
Sbjct: 541 ILLKLADLMNIAGNVSNIDNLQNCIGSAVTAMGPEKILTLIPISINPSDSTVQNMWLIPV 600

Query: 601 LHSHVVGASLGYYLEYIVPLAKSFQDESCKVKKIAACKNLQTCARNLWKLLPAFCRHPSD 660
           LHSHVVGASL YYLEYIVPLAKSFQD+SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSD
Sbjct: 601 LHSHVVGASLDYYLEYIVPLAKSFQDQSCKVKKIAACKNLQTCARNLWKLLPAFCRHPSD 660

Query: 661 MHRRMGMLSELLITLLKEDSFMHEDIAAALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKA 666
           MHRR+GMLSELLITLLKEDSFMHEDIAAALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKA
Sbjct: 661 MHRRIGMLSELLITLLKEDSFMHEDIAAALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKA 720

[Close]

BLAST of Cucsat.G13222 vs. NCBI nr
Match: XP_038905709.1 (RRP12-like protein [Benincasa hispida])

HSP 1 Score: 1087 bits (2810), Expect = 0.0
Identity = 581/665 (87.37%), Postives = 613/665 (92.18%), Query Frame = 0


Query: 4   MSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSILHSE 63
           MSEGNQQLQE E DDAEAV LTDA+DICAQLMERYAKSSA QHRHLLASAVAMRSIL SE
Sbjct: 1   MSEGNQQLQERETDDAEAVALTDASDICAQLMERYAKSSASQHRHLLASAVAMRSILQSE 60

Query: 64  SLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASEAAG 123
           SLPLTPAAYFAAAISAIDNASAS+  DPTALSALLSFLAI LPLV P GISAPNASEAAG
Sbjct: 61  SLPLTPAAYFAAAISAIDNASASEAFDPTALSALLSFLAITLPLVPPRGISAPNASEAAG 120

Query: 124 VLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVRRCA 183
           VLVVLLGMK+LTVSTVRAAVKCLGILLGFCNLEDWASV+LGFDTLLKFSVDRRP+VRRCA
Sbjct: 121 VLVVLLGMKSLTVSTVRAAVKCLGILLGFCNLEDWASVQLGFDTLLKFSVDRRPRVRRCA 180

Query: 184 QESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQHLDV 243
           Q+SLITFLNSLKHSAIKK+AS+LVFSLLKSCMPSA+KLSTITPVDG  EDK+SH QHLDV
Sbjct: 181 QDSLITFLNSLKHSAIKKEASNLVFSLLKSCMPSAIKLSTITPVDGREEDKESHGQHLDV 240

Query: 244 LHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVPALE 303
           LH LN+IIL IPLLSK+VR K+LKELIKLV+PQFSIVT HSFKAM+LI KSSK GV ALE
Sbjct: 241 LHILNLIILAIPLLSKKVRLKILKELIKLVNPQFSIVTGHSFKAMELIFKSSKAGVVALE 300

Query: 304 VESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLLTSD 363
           VESIIV+IGSYLS GDKNPLDTVLSA TLLKCAMDAGGSS+AKKNLPVVCGYMAGLL SD
Sbjct: 301 VESIIVSIGSYLSLGDKNPLDTVLSATTLLKCAMDAGGSSIAKKNLPVVCGYMAGLLASD 360

Query: 364 VSKAVHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAICEDVLNS 423
            SKA+HASSV+KELIQDYVDQECLI    KDS LEDCNLENIEVQA+KSTC+I EDVLNS
Sbjct: 361 ASKALHASSVLKELIQDYVDQECLIV---KDSRLEDCNLENIEVQALKSTCSIFEDVLNS 420

Query: 424 CDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDN--NCIGSAVT 483
            +GDLGKYILDVISALFL+LGTTS IYMK ILLKLADLMNIAGN+SNIDN  NCIGSAVT
Sbjct: 421 YEGDLGKYILDVISALFLRLGTTSFIYMKRILLKLADLMNIAGNISNIDNLQNCIGSAVT 480

Query: 484 AMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDESCK 543
           AMGPEKILTLIPISINPGD TVQNMWL+PVL SHVVG SLGYYLEYIVPLAK FQDES K
Sbjct: 481 AMGPEKILTLIPISINPGDLTVQNMWLVPVLQSHVVGGSLGYYLEYIVPLAKYFQDESSK 540

Query: 544 VKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIAAAL 603
           VKKIA CKNLQTCA NLW+LLPAFCRHPSDMH+R+GMLSELLITLLKEDSFMHED+A AL
Sbjct: 541 VKKIATCKNLQTCACNLWRLLPAFCRHPSDMHQRIGMLSELLITLLKEDSFMHEDVAVAL 600

Query: 604 QVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHLKVF 663
           QVLVNQNAVVPN NDVSVYSKK +SKNMKALVSCST LLQ L ELFVDS+PTKR+HLK  
Sbjct: 601 QVLVNQNAVVPNFNDVSVYSKKTESKNMKALVSCSTKLLQPLVELFVDSVPTKRAHLKDA 660

Query: 664 FYCLA 666
             CLA
Sbjct: 661 IGCLA 662

[Close]

BLAST of Cucsat.G13222 vs. ExPASy TrEMBL
Match: A0A0A0LHL3 (NUC173 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822420 PE=3 SV=1)

HSP 1 Score: 1233 bits (3190), Expect = 0.0
Identity = 658/668 (98.50%), Postives = 659/668 (98.65%), Query Frame = 0


Query: 1   MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60
           MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL
Sbjct: 1   MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60

Query: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASE 120
           HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLV PGGISAPNASE
Sbjct: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVPPGGISAPNASE 120

Query: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180
           AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR
Sbjct: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180

Query: 181 RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQH 240
           RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLST TPVDGPGEDKQSHAQH
Sbjct: 181 RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTSTPVDGPGEDKQSHAQH 240

Query: 241 LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP 300
           LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP
Sbjct: 241 LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP 300

Query: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360
           ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL
Sbjct: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360

Query: 361 TSDVSKAVHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAICEDV 420
           TSDVSKAVHASSVVKELIQDYVDQECLIALIDKD HLEDCNLENIEVQAIKSTCAICEDV
Sbjct: 361 TSDVSKAVHASSVVKELIQDYVDQECLIALIDKDLHLEDCNLENIEVQAIKSTCAICEDV 420

Query: 421 LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDN--NCIGS 480
           LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDN  NCIGS
Sbjct: 421 LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDNLQNCIGS 480

Query: 481 AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE 540
           AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE
Sbjct: 481 AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE 540

Query: 541 SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA 600
           SCKVKKIAACKNL+TCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA
Sbjct: 541 SCKVKKIAACKNLRTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA 600

Query: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL 660
           AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL
Sbjct: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL 660

Query: 661 KVFFYCLA 666
           K    CLA
Sbjct: 661 KDAIGCLA 668

[Close]

BLAST of Cucsat.G13222 vs. ExPASy TrEMBL
Match: A0A5A7UJH3 (RRP12-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002250 PE=3 SV=1)

HSP 1 Score: 1198 bits (3099), Expect = 0.0
Identity = 637/668 (95.36%), Postives = 651/668 (97.46%), Query Frame = 0


Query: 1   MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60
           MKSMSEG+QQLQESEKDDAEAV LTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL
Sbjct: 1   MKSMSEGDQQLQESEKDDAEAVALTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60

Query: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASE 120
           HSESLPLTPAAYFAAAISAIDNASASDTLDPT LSALLSFLAI LPLV  GGISAPNASE
Sbjct: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTVLSALLSFLAITLPLVPHGGISAPNASE 120

Query: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180
           AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR
Sbjct: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180

Query: 181 RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQH 240
           RCAQESLITFLNSLKHSAIKK+AS+LVFSLLKSCMPSAVKLST+TPVDGP EDKQSH QH
Sbjct: 181 RCAQESLITFLNSLKHSAIKKEASNLVFSLLKSCMPSAVKLSTVTPVDGPEEDKQSHGQH 240

Query: 241 LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP 300
           LDVLH+LNVIIL IPLLSK+VRFKMLKELIKLV+PQFSIVTAHSFKAM+LILKSSKTGVP
Sbjct: 241 LDVLHRLNVIILAIPLLSKKVRFKMLKELIKLVNPQFSIVTAHSFKAMELILKSSKTGVP 300

Query: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360
           ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL
Sbjct: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360

Query: 361 TSDVSKAVHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAICEDV 420
           TSDVSKA+HASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAI EDV
Sbjct: 361 TSDVSKALHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAIFEDV 420

Query: 421 LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDN--NCIGS 480
           L+SCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGN+SNIDN  NCIGS
Sbjct: 421 LDSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNVSNIDNLQNCIGS 480

Query: 481 AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE 540
           AVTAMGPEKILTLIPISINP DSTVQNMWLIPVLHSHVVGASL YYLEYIVPLAKSFQD+
Sbjct: 481 AVTAMGPEKILTLIPISINPSDSTVQNMWLIPVLHSHVVGASLDYYLEYIVPLAKSFQDQ 540

Query: 541 SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA 600
           SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRR+GMLSELLITLLKEDSFMHEDIA
Sbjct: 541 SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRIGMLSELLITLLKEDSFMHEDIA 600

Query: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL 660
           AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDS+PTKRSHL
Sbjct: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSLPTKRSHL 660

Query: 661 KVFFYCLA 666
           K    CLA
Sbjct: 661 KDAIGCLA 668

[Close]

BLAST of Cucsat.G13222 vs. ExPASy TrEMBL
Match: A0A1S3B7P4 (RRP12-like protein OS=Cucumis melo OX=3656 GN=LOC103486929 PE=3 SV=1)

HSP 1 Score: 1198 bits (3099), Expect = 0.0
Identity = 637/668 (95.36%), Postives = 651/668 (97.46%), Query Frame = 0


Query: 1   MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60
           MKSMSEG+QQLQESEKDDAEAV LTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL
Sbjct: 1   MKSMSEGDQQLQESEKDDAEAVALTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60

Query: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASE 120
           HSESLPLTPAAYFAAAISAIDNASASDTLDPT LSALLSFLAI LPLV  GGISAPNASE
Sbjct: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTVLSALLSFLAITLPLVPHGGISAPNASE 120

Query: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180
           AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR
Sbjct: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180

Query: 181 RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQH 240
           RCAQESLITFLNSLKHSAIKK+AS+LVFSLLKSCMPSAVKLST+TPVDGP EDKQSH QH
Sbjct: 181 RCAQESLITFLNSLKHSAIKKEASNLVFSLLKSCMPSAVKLSTVTPVDGPEEDKQSHGQH 240

Query: 241 LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP 300
           LDVLH+LNVIIL IPLLSK+VRFKMLKELIKLV+PQFSIVTAHSFKAM+LILKSSKTGVP
Sbjct: 241 LDVLHRLNVIILAIPLLSKKVRFKMLKELIKLVNPQFSIVTAHSFKAMELILKSSKTGVP 300

Query: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360
           ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL
Sbjct: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLL 360

Query: 361 TSDVSKAVHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAICEDV 420
           TSDVSKA+HASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAI EDV
Sbjct: 361 TSDVSKALHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAIFEDV 420

Query: 421 LNSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDN--NCIGS 480
           L+SCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGN+SNIDN  NCIGS
Sbjct: 421 LDSCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNVSNIDNLQNCIGS 480

Query: 481 AVTAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDE 540
           AVTAMGPEKILTLIPISINP DSTVQNMWLIPVLHSHVVGASL YYLEYIVPLAKSFQD+
Sbjct: 481 AVTAMGPEKILTLIPISINPSDSTVQNMWLIPVLHSHVVGASLDYYLEYIVPLAKSFQDQ 540

Query: 541 SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIA 600
           SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRR+GMLSELLITLLKEDSFMHEDIA
Sbjct: 541 SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRIGMLSELLITLLKEDSFMHEDIA 600

Query: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHL 660
           AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDS+PTKRSHL
Sbjct: 601 AALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSLPTKRSHL 660

Query: 661 KVFFYCLA 666
           K    CLA
Sbjct: 661 KDAIGCLA 668

[Close]

BLAST of Cucsat.G13222 vs. ExPASy TrEMBL
Match: A0A5D3DPZ7 (RRP12-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007190 PE=3 SV=1)

HSP 1 Score: 1103 bits (2852), Expect = 0.0
Identity = 612/755 (81.06%), Postives = 624/755 (82.65%), Query Frame = 0


Query: 1   MKSMSEGNQQLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60
           MKSMSEG+QQLQESEKDDAEAV LTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL
Sbjct: 1   MKSMSEGDQQLQESEKDDAEAVALTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSIL 60

Query: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASE 120
           HSESLPLTPAAYFAAAISAIDNASASDTLDPT LSALLSFLAI LPLV  GGISAPNASE
Sbjct: 61  HSESLPLTPAAYFAAAISAIDNASASDTLDPTVLSALLSFLAITLPLVPHGGISAPNASE 120

Query: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180
           AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR
Sbjct: 121 AAGVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVR 180

Query: 181 RCAQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQH 240
           RCAQESLITFLNSLKHSAIKK+AS+LVFSLLKSCMPSAVKLST+TPVDGP EDKQSH QH
Sbjct: 181 RCAQESLITFLNSLKHSAIKKEASNLVFSLLKSCMPSAVKLSTVTPVDGPEEDKQSHGQH 240

Query: 241 LDVLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVP 300
           LDVLH+LN                            FSIVTAHSFKAM+LILKSSKTGVP
Sbjct: 241 LDVLHRLN----------------------------FSIVTAHSFKAMELILKSSKTGVP 300

Query: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAG-- 360
           ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAG  
Sbjct: 301 ALEVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGER 360

Query: 361 ------------------------------------------------------------ 420
                                                                       
Sbjct: 361 SESKDWNPAISASFKDLLKDRDQERVSKSQWPATEPWGSKAILEGDQIPLNKMVELAASI 420

Query: 421 -------------------------LLTSDVSKAVHASSVVKELIQDYVDQECLIALIDK 480
                                    LLTSDVSKA+HASSVVKELIQDYVDQECLIALIDK
Sbjct: 421 AFPKEIPHDLFQRGCHIPGIENKDSLLTSDVSKALHASSVVKELIQDYVDQECLIALIDK 480

Query: 481 DSHLEDCNLENIEVQAIKSTCAICEDVLNSCDGDLGKYILDVISALFLKLGTTSIIYMKH 540
           DSHLEDCNLENIEVQAIKSTCAI EDVL+SCDGDLGKYILDVISALFLKLGTTSIIYMKH
Sbjct: 481 DSHLEDCNLENIEVQAIKSTCAIFEDVLDSCDGDLGKYILDVISALFLKLGTTSIIYMKH 540

Query: 541 ILLKLADLMNIAGNLSNIDN--NCIGSAVTAMGPEKILTLIPISINPGDSTVQNMWLIPV 600
           ILLKLADLMNIAGN+SNIDN  NCIGSAVTAMGPEKILTLIPISINP DSTVQNMWLIPV
Sbjct: 541 ILLKLADLMNIAGNVSNIDNLQNCIGSAVTAMGPEKILTLIPISINPSDSTVQNMWLIPV 600

Query: 601 LHSHVVGASLGYYLEYIVPLAKSFQDESCKVKKIAACKNLQTCARNLWKLLPAFCRHPSD 660
           LHSHVVGASL YYLEYIVPLAKSFQD+SCKVKKIAACKNLQTCARNLWKLLPAFCRHPSD
Sbjct: 601 LHSHVVGASLDYYLEYIVPLAKSFQDQSCKVKKIAACKNLQTCARNLWKLLPAFCRHPSD 660

Query: 661 MHRRMGMLSELLITLLKEDSFMHEDIAAALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKA 666
           MHRR+GMLSELLITLLKEDSFMHEDIAAALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKA
Sbjct: 661 MHRRIGMLSELLITLLKEDSFMHEDIAAALQVLVNQNAVVPNCNDVSVYSKKMQSKNMKA 720

[Close]

BLAST of Cucsat.G13222 vs. ExPASy TrEMBL
Match: A0A6J1FK07 (RRP12-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444726 PE=3 SV=1)

HSP 1 Score: 978 bits (2528), Expect = 0.0
Identity = 529/666 (79.43%), Postives = 574/666 (86.19%), Query Frame = 0


Query: 4   MSEGNQ-QLQESEKDDAEAVVLTDATDICAQLMERYAKSSAPQHRHLLASAVAMRSILHS 63
           MSEG Q Q Q+ +KDDAE V L+DA+DICAQLMERY+KSSAPQH HLLASAVAMRSIL S
Sbjct: 1   MSEGTQHQQQDRDKDDAEVVSLSDASDICAQLMERYSKSSAPQHSHLLASAVAMRSILES 60

Query: 64  ESLPLTPAAYFAAAISAIDNASASDTLDPTALSALLSFLAIALPLVLPGGISAPNASEAA 123
           ESLPLTPA YFAAAISAIDNAS SDTLD TALSALLSFLAI LPLV P GISAPNASEA 
Sbjct: 61  ESLPLTPAGYFAAAISAIDNASVSDTLDLTALSALLSFLAITLPLVPPTGISAPNASEAV 120

Query: 124 GVLVVLLGMKNLTVSTVRAAVKCLGILLGFCNLEDWASVELGFDTLLKFSVDRRPKVRRC 183
           GVLVVLLG K+LTVSTVRAAVKCLGILLGFCNLEDW SV+LGFDTLLKFSVDRRPKVRRC
Sbjct: 121 GVLVVLLGKKSLTVSTVRAAVKCLGILLGFCNLEDWGSVQLGFDTLLKFSVDRRPKVRRC 180

Query: 184 AQESLITFLNSLKHSAIKKQASSLVFSLLKSCMPSAVKLSTITPVDGPGEDKQSHAQHLD 243
           AQ+SLITFLNSLK SAIKK+AS LVFS L+SCMPSA+KLST + +DG   D QS+ QHLD
Sbjct: 181 AQDSLITFLNSLKDSAIKKEASKLVFSFLESCMPSAIKLSTSSRIDGREVDNQSNDQHLD 240

Query: 244 VLHKLNVIILTIPLLSKRVRFKMLKELIKLVSPQFSIVTAHSFKAMKLILKSSKTGVPAL 303
           VLH LNVI L IPLLSK+VR KMLK+LIKLV P++S+VT HSFKA++LILKSSK GV A 
Sbjct: 241 VLHMLNVITLAIPLLSKKVRLKMLKKLIKLVKPRYSVVTGHSFKAIELILKSSKAGVFAS 300

Query: 304 EVESIIVAIGSYLSSGDKNPLDTVLSAITLLKCAMDAGGSSVAKKNLPVVCGYMAGLLTS 363
           EVESIIV+IGSYLS GD NPLDTVL+A TLLKCAMDAGGSS+A +NLPVVCGYM GLLTS
Sbjct: 301 EVESIIVSIGSYLSLGDANPLDTVLTAATLLKCAMDAGGSSIAIRNLPVVCGYMTGLLTS 360

Query: 364 DVSKAVHASSVVKELIQDYVDQECLIALIDKDSHLEDCNLENIEVQAIKSTCAICEDVLN 423
           D SKA+HAS ++KELIQD+VDQECLI    KD  LEDCNLE+IEVQAIKSTC + EDVLN
Sbjct: 361 DASKALHASGILKELIQDHVDQECLIG---KDPCLEDCNLESIEVQAIKSTCGVFEDVLN 420

Query: 424 SCDGDLGKYILDVISALFLKLGTTSIIYMKHILLKLADLMNIAGNLSNIDN--NCIGSAV 483
           S D DLGKYI DVIS LFLKLGTTS  YMKHILLKLADL+N AGN+S++DN  NC+GSAV
Sbjct: 421 SYDEDLGKYITDVISDLFLKLGTTSFTYMKHILLKLADLINSAGNISHVDNLQNCVGSAV 480

Query: 484 TAMGPEKILTLIPISINPGDSTVQNMWLIPVLHSHVVGASLGYYLEYIVPLAKSFQDESC 543
           TAMGPEKILTLIPISIN GD TVQNMWLIP+L SHV GASLGYYLEYIVPLAKSFQ ESC
Sbjct: 481 TAMGPEKILTLIPISINAGDLTVQNMWLIPILQSHVTGASLGYYLEYIVPLAKSFQHESC 540

Query: 544 KVKKIAACKNLQTCARNLWKLLPAFCRHPSDMHRRMGMLSELLITLLKEDSFMHEDIAAA 603
           KVKK A  KNLQTCA  LW+LLPAFCRHPSDMH+ +GML+EL+ITLLKE SFMHEDIA A
Sbjct: 541 KVKKAATRKNLQTCAHKLWRLLPAFCRHPSDMHQSLGMLTELIITLLKEGSFMHEDIAVA 600

Query: 604 LQVLVNQNAVVPNCNDVSVYSKKMQSKNMKALVSCSTNLLQALAELFVDSIPTKRSHLKV 663
           LQ+LVN N V PN N+ S YSKK  SKN KALVS S  LLQ LAELFV S+PT RSHLK 
Sbjct: 601 LQILVNNNTVAPNSNEASAYSKKTASKNRKALVSSSAKLLQPLAELFVGSVPTMRSHLKD 660

Query: 664 FFYCLA 666
              CLA
Sbjct: 661 TIGCLA 663

The following BLAST results are available for this feature:

BLAST of Cucsat.G13222 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6P5B0	4.7e-22	23.08	RRP12-like protein OS=Mus musculus OX=10090 GN=Rrp12 PE=1 SV=1	[more]
Q5JTH9	8.0e-22	22.91	RRP12-like protein OS=Homo sapiens OX=9606 GN=RRP12 PE=1 SV=2	[more]
Q5ZKD5	1.8e-21	23.21	RRP12-like protein OS=Gallus gallus OX=9031 GN=RRP12 PE=2 SV=1	[more]
Q9VYA7	4.1e-18	23.46	RRP12-like protein OS=Drosophila melanogaster OX=7227 GN=CG2691 PE=1 SV=2	[more]
Q9C0X8	6.8e-13	29.60	Putative ribosomal RNA-processing protein 12 OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of Cucsat.G13222 vs. NCBI nr


Match Name	Identity	Description
XP_004136785.1	98.50	RRP12-like protein [Cucumis sativus] >KGN59491.1 hypothetical protein Csa_001385...	[more]
XP_008443313.1	95.36	PREDICTED: RRP12-like protein [Cucumis melo]	[more]
KAA0053835.1	95.36	RRP12-like protein [Cucumis melo var. makuwa]	[more]
TYK25565.1	81.06	RRP12-like protein [Cucumis melo var. makuwa]	[more]
XP_038905709.1	87.37	RRP12-like protein [Benincasa hispida]	[more]

BLAST of Cucsat.G13222 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0LHL3	98.50	NUC173 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822420 PE=3...	[more]
A0A5A7UJH3	95.36	RRP12-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G0...	[more]
A0A1S3B7P4	95.36	RRP12-like protein OS=Cucumis melo OX=3656 GN=LOC103486929 PE=3 SV=1	[more]
A0A5D3DPZ7	81.06	RRP12-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A6J1FK07	79.43	RRP12-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444726 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 2..113 e-value: 5.9E-31 score: 109.2
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 5..143
IPR007052	CS domain	PFAM	PF04969	CS	coord: 8..79 e-value: 1.6E-6 score: 29.1
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 3..98 score: 16.078482
None	No IPR available	GENE3D	6.10.140.350		coord: 114..158 e-value: 1.2E-18 score: 69.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..158
None	No IPR available	PANTHER	PTHR22932:SF15	CO-CHAPERONE PROTEIN P23-2	coord: 1..157
None	No IPR available	PANTHER	PTHR22932	TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE	coord: 1..157
None	No IPR available	CDD	cd06465	p23_hB-ind1_like	coord: 6..120 e-value: 6.91123E-44 score: 138.496

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G13222.T3	Cucsat.G13222.T3	mRNA
Cucsat.G13222.T18	Cucsat.G13222.T18	mRNA
Cucsat.G13222.T17	Cucsat.G13222.T17	mRNA
Cucsat.G13222.T10	Cucsat.G13222.T10	mRNA
Cucsat.G13222.T5	Cucsat.G13222.T5	mRNA
Cucsat.G13222.T6	Cucsat.G13222.T6	mRNA
Cucsat.G13222.T7	Cucsat.G13222.T7	mRNA
Cucsat.G13222.T1	Cucsat.G13222.T1	mRNA
Cucsat.G13222.T15	Cucsat.G13222.T15	mRNA
Cucsat.G13222.T2	Cucsat.G13222.T2	mRNA
Cucsat.G13222.T16	Cucsat.G13222.T16	mRNA
Cucsat.G13222.T4	Cucsat.G13222.T4	mRNA
Cucsat.G13222.T12	Cucsat.G13222.T12	mRNA
Cucsat.G13222.T9	Cucsat.G13222.T9	mRNA
Cucsat.G13222.T8	Cucsat.G13222.T8	mRNA
Cucsat.G13222.T11	Cucsat.G13222.T11	mRNA
Cucsat.G13222.T13	Cucsat.G13222.T13	mRNA
Cucsat.G13222.T14	Cucsat.G13222.T14	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051131	chaperone-mediated protein complex assembly
biological_process	GO:0006457	protein folding
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005634	nucleus
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0051879	Hsp90 protein binding