Cucsat.G13124 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAAGGTATAGCTTCTTGAAAGGATTCAATACTATAAAGAAAAGGGAAATCCCGATCCAACCCCCAAACATGACACAATACAGATACATGAAGAGAAGGAGTGAATGGTGATTTTGGAAGGACTACAAAAGAAACGAATAGCTAGAATTGAGAATCGTCTCCTTCAACAATAAATTTCGACCAAATATAAAATTAAATTAAGAACCTAGAAGAAAAATATAATAATAATAATAATAATATGAATATTGAAAAAGTAGTATTGTTCCAGTCCAAGGTCGTAGAAACTGCACAGAACGTGATCCTTTTTTCCTTACGTTTCTCACCAAAACAAAAAAAGAAGAAGAAGAAAGAAAAGAACCTCTTTCCTCCTATTGGTCAAAATAGTCTCACAAATTTAAAAGAAAAAAAGAAAATTAGGTGGATGATGGACCCACCTACTTGGGTATGATCAACGGCTGCTGCGATCCTACGGATCAAAATGTAGCCAATGGGAAGGACTTCGGTACACTCTTCTTACGATGTACTCGACTTCACGGGAACAGTCCCCGCACCATTCCTTCTCCTTCTCAAACCTACTCTGTTATTCACACGCACCGCACAATGCACATAACATCAATTCTAAAACAACCTCAATTCGGGTCGGATTATTACTCCGATTCTTTTACGGGTCGGGCTATTGGACCCGCGTGTGACCGGAATCCCGCCGTCACCGCGTCGTTCGCGCAGCAGTGAAATCCCGCCGCCACCCCTCTTTCTTTTGCACTCAAGCAATCTCCGCAGATTCTCCTTTCCGATCTCCCACTCTTGTTCCGCCCCCCATCTCCGCCATCCCCCATCCTCAGGTTGCTCATCTGTATGCTCATTAAATACTTCTCCTTCTCCAATTGCAGCTTCCTAATTCGGTCTTCGTATTCGTATCGATCCATCACCGGCGAGATGAAGCCAGCCAGCAATTCGTTTTCGATGCCTCCGTTCCGTCTCAACAGCATCACATTCTCTGGTGGATTCTTCTTCTTTAATAGATTCGTCTTTGTTTGCGTCTTCGTCGCCGACGAGAAGTAATAATCCTCTTCGTTGTCGTGGATGACCTTTCGCCTCCTCTCGCGTCTTGACCGTTTCAAAACCACAAGAAAGAAACTATTCTTCTCGCCGGAGATTGCGCCAAAATTGACCTTCCCAGTAATAGGAATTCTCCGCCGAATCTTCGTGGAGGAATCCAGAGAGATCTTATACTCCGCGAGATAAACCGTGAACTGGTGCGAAGAGATTCCAATCATCTTGCTCAAACTGGACTGGAAATTCTTGAACTCCGTCGAAGAAGAAACGATAACGGAACCGATGTTGGTATCACGTTCGCCATCGTGGAAAACGATCGGGAACGAAACGCCCTCGACGGTCTCCGCCATCGCCTCTACAAATAAAAGAAAAACTCTTCAATTAAGGAACAGAAGGAAACTTTCATAAAAAAAGAAAGAAAGAAAGAAGAGGGTTTTACGGAGAAATCTTGAAGAAGACTATGGAAGGTTTTTACTTTAACAAGTGGGTTTTAGGTTTTTATGGTAACAACCTCAAGGCGGTGAGGGTATTTTCGGAATAAGATATTAGATTTATGGCCTTCGTACCTAAGGAAGCCAAACGAAGAACTAAGAAGGAAACTTCAAAACGTTTATATAGAAGGAAAGAGACTTGGGAATCAAGTAAAATATAAACGACATCGTAATAGTCAGCTTGGCTGTGTTTAGACCAAAATGCCCCCGTCTTCTAATTAAATCCTCGTCAACGCATTTTTGGAAGGGGTCGTCTTCTTCTTCATCTACCATCCTCCATCCATGGAGTTTCCTCCAGAAGGTTACAGAAGAGGCGTTGGGATTTGCCTTCTTAATTCTTCTGGAAAAGTAATTTCGCTTCGTTGCCTTCTTCTTTCGCTCTTATCTTGTTTTCTTCTGATCATAACCAATTTTTCTCTCTCCAATTCATCTTTTGCAGATTTTTGCAGCTTCGAGACTGAACGGGCATGAAATCTGGGAAATGCCTCAGGTAGTTTCTATTCCGTTGTATTTTCAGCTTTATTCATTGGGAAACAGGAAAAGTACTATCTCTCTGCTTTTCTTTAAGTACTTCTCTCGCTCTCGCTTTATTCTGTGCGAATTAGGGCACATATTTATAGGTTCCATCTCTGATTTCCTTGTGGGAATATCCCAAAATTCTTTCTTGAGATCCCTTTTTGAAGCAATTCGAGGATCAGCTGAAAATGAGAATGGGATTTTTGAGTAATCTGTACCCATTTCTCTCGATTTTTCTCTTTGAACGTAGTGTTGGTGGAATTCTTGCAATGGTGCTGCGGGTTCTGGTTCTTTCCATTAGAGAATTGTATTAGCTTTCAGAAAGCTGTTTATTATGGTTCTGATGGAAACTTTGGTGGGATTCTCATCTTTTCAATCATGAGACGGAGAGGTGTTTGATATTATGTCTTTTATTTCTTTTACAATTGGAGTATCTACATGAGTTAGCTTATATACTATTTAACTAGGAAACTCATAGTTGACTTCAAATGATGGATTGATCCAGTAACTTCAAAATCATATAGATCTGTATTGCCTTGTGGAACTTGAAGCTTGTGTTCCCTGACACTGATTTTCCATCATACAGGGTGGTGTAAATGAAGGGGAAGATCTCAAAACTGCAGCCAAGAGAGAACTCATGGAAGAAACAGGAGTAGTTTCTGCAGAAATTATAGCTGAGGTATGCATTTTGAGATGGTTACAGTTATATAACTTTGCAGCTTCCATATCTCGTCTTTAGTACACTGTATGATGAACTTTAGAAAAATGAATTCTGGCTTCATTTGAATTGGGACTGATTCGATCCATGGTTAAATATAGCTACCCTACTGGCTTTCTTACGATTTCTCTCCCGAAGTAAGCATCAGACACATCAAACACTGGGGAGTCATATACAAAGGCCAGACCCATAAGTGGTATTGCCTCCATAAAATCCGACTCCTATAACCTTTTCTTGTTAAGGAACTTTCTTTTTTGGAAAGCATCTCCACATTTATTTTTTTTGCTTTCTTTGCATGATCCTATATTTTTTTAATCCTCAAAGAACTGTACATAGTTGGTAACTTTTTCTTTCTTTCAGCTTCAAAGAATTGATCAACGTATATGGATTATATTATTTCCCCTTCAAGCTTCCGCGTTCAATTGATCAATCATAAAGCTCGTGAACAGGTTTCTCATGAAGTTTACCGGAAAAGACGAAGAGATAAATCTTCTAGGTGATGGAACAGAAAGGCAAGAGTTTGGGAAATGGTCATGGATGTCAATTGAACAGCTACTGAACCAAGTGTGTAAACAACTTCTACCTAATTCATTCTTTCTCCTGCAACAATTTTTCATAAACCTTCACAATAATTTGAACAGGCTAAGAAATCCAGGAAGCCTGTTTACGAACAAGTGATGAAGGAGTTTGGTAACATCATACTTGGAATTGTGGGTGACGATCTTTCTCCCACGCAGAGTGAAACTCAATTGGTTATTTGATGGGTTTCGAATATATTTATCGAGAGTACCACGAACATATACCATACGAATCACAGGTTCATATAAGATGTTATGTAGTCATATCTAAGTTTGATTTTTAAAATAAGAGATGCCTTTATTTAGAGATAAGGCAGATATGTTTGATCCTCTTGGAACTTGAAGTGGTGGATTAATGAAATCTGAGGCCAAGATATTGGAATCAGAACCTTCACTAAATTGTGCAGCTGTAAAAGGATTTAAGTGTCCAAATAAGAGATAAAGGGATTTTGATTTATAGAAAGGAATCAAAACGTGGGATTCACTTTTAAATTTCGGAATTATTCTCTTAAAAGTGATTGGATTTTCATTGCCCAAACAAAACATTTTCAAAACTTTGTTCTCCTTTCCTATTTTGTGAAATCTATTGCTTATTTTTCAATCTTTTGTATTTAAAACTTTTAGGGGTTGTTGGATAAAGAATTGTTTAAACTCGAGTTGTTAAGTTCATATTCCAACTTTCTTTTTTAGTCAATGCTATAGGGCCAGGAGTTATATTTCAAACAAAATTTCAATTTGAAAAGAAATTTGATTATATATTTGAATTACAGTTTGAAATATGTTCCAATTTAATTAAATAGAATTTTAAGACTTCACTCAAAATTTATCTAAACTTATCTTTTGATTTAAATTTGACCAACTTTTGATTCTG ATGGAGTTTCCTCCAGAAGGTTACAGAAGAGGCGTTGGGATTTGCCTTCTTAATTCTTCTGGAAAAATTTTTGCAGCTTCGAGACTGAACGGGCATGAAATCTGGGAAATGCCTCAGGGTGGTGTAAATGAAGGGGAAGATCTCAAAACTGCAGCCAAGAGAGAACTCATGGAAGAAACAGGAGTAGTTTCTGCAGAAATTATAGCTGAGCTACCCTACTGGCTTTCTTACGATTTCTCTCCCGAAGTAAGCATCAGACACATCAAACACTGGGGAGTCATATACAAAGGCCAGACCCATAAGTGCTTCAAAGAATTGATCAACGTATATGGATTATATTATTTCCCCTTCAAGCTTCCGCGTTCAATTGATCAATCATAA MEFPPEGYRRGVGICLLNSSGKIFAASRLNGHEIWEMPQGGVNEGEDLKTAAKRELMEETGVVSAEIIAELPYWLSYDFSPEVSIRHIKHWGVIYKGQTHKCFKELINVYGLYYFPFKLPRSIDQS Homology
BLAST of Cucsat.G13124 vs. ExPASy Swiss-Prot
Match: Q9CAF2 (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT26 PE=1 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 3.4e-39 Identity = 73/122 (59.84%), Postives = 94/122 (77.05%), Query Frame = 0
BLAST of Cucsat.G13124 vs. ExPASy Swiss-Prot
Match: Q9FNH4 (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT27 PE=1 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 1.9e-37 Identity = 74/120 (61.67%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of Cucsat.G13124 vs. ExPASy Swiss-Prot
Match: Q9C6Z2 (Nudix hydrolase 25 OS=Arabidopsis thaliana OX=3702 GN=NUDT25 PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 6.1e-28 Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 0
BLAST of Cucsat.G13124 vs. ExPASy Swiss-Prot
Match: B3CM46 (RNA pyrophosphohydrolase OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) OX=570417 GN=rppH PE=3 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 2.4e-24 Identity = 57/130 (43.85%), Postives = 84/130 (64.62%), Query Frame = 0
BLAST of Cucsat.G13124 vs. ExPASy Swiss-Prot
Match: Q2J3I9 (RNA pyrophosphohydrolase OS=Rhodopseudomonas palustris (strain HaA2) OX=316058 GN=rppH PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.1e-24 Identity = 57/127 (44.88%), Postives = 77/127 (60.63%), Query Frame = 0
BLAST of Cucsat.G13124 vs. NCBI nr
Match: XP_031739122.1 (nudix hydrolase 26, chloroplastic [Cucumis sativus]) HSP 1 Score: 286 bits (733), Expect = 5.71e-97 Identity = 139/141 (98.58%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Cucsat.G13124 vs. NCBI nr
Match: XP_008443595.2 (PREDICTED: nudix hydrolase 26, chloroplastic-like [Cucumis melo] >TYK25315.1 nudix hydrolase 26 [Cucumis melo var. makuwa]) HSP 1 Score: 272 bits (695), Expect = 3.09e-91 Identity = 130/139 (93.53%), Postives = 133/139 (95.68%), Query Frame = 0
BLAST of Cucsat.G13124 vs. NCBI nr
Match: KAA0043817.1 (nudix hydrolase 26 [Cucumis melo var. makuwa]) HSP 1 Score: 266 bits (681), Expect = 4.66e-89 Identity = 130/142 (91.55%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of Cucsat.G13124 vs. NCBI nr
Match: XP_038904841.1 (nudix hydrolase 26, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 256 bits (653), Expect = 8.90e-85 Identity = 122/142 (85.92%), Postives = 131/142 (92.25%), Query Frame = 0
BLAST of Cucsat.G13124 vs. NCBI nr
Match: KAG6580744.1 (Nudix hydrolase 26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 239 bits (611), Expect = 9.28e-78 Identity = 116/142 (81.69%), Postives = 124/142 (87.32%), Query Frame = 0
BLAST of Cucsat.G13124 vs. ExPASy TrEMBL
Match: A0A5D3DP41 (Nudix hydrolase 26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004530 PE=3 SV=1) HSP 1 Score: 272 bits (695), Expect = 1.50e-91 Identity = 130/139 (93.53%), Postives = 133/139 (95.68%), Query Frame = 0
BLAST of Cucsat.G13124 vs. ExPASy TrEMBL
Match: A0A1S3B8G6 (nudix hydrolase 26, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487152 PE=3 SV=1) HSP 1 Score: 272 bits (695), Expect = 1.50e-91 Identity = 130/139 (93.53%), Postives = 133/139 (95.68%), Query Frame = 0
BLAST of Cucsat.G13124 vs. ExPASy TrEMBL
Match: A0A5A7TPT1 (Nudix hydrolase 26 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001500 PE=3 SV=1) HSP 1 Score: 266 bits (681), Expect = 2.25e-89 Identity = 130/142 (91.55%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of Cucsat.G13124 vs. ExPASy TrEMBL
Match: A0A6J1J4S6 (nudix hydrolase 26, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481747 PE=3 SV=1) HSP 1 Score: 238 bits (606), Expect = 2.59e-77 Identity = 115/142 (80.99%), Postives = 123/142 (86.62%), Query Frame = 0
BLAST of Cucsat.G13124 vs. ExPASy TrEMBL
Match: A0A6J1F566 (nudix hydrolase 26, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442265 PE=4 SV=1) HSP 1 Score: 237 bits (604), Expect = 5.22e-77 Identity = 115/142 (80.99%), Postives = 122/142 (85.92%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|