Cucsat.G1287 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATAGAAAAGGGAAAATCAGCACGTGGGAACCCAAATAATAATACTCCGCCAAATCTCCTTCCATTTCAATTCAATCCAAATTCTTCTTCTTCTTCTTCGCTCTTCTTCATCCTCCTTCAAATTCTTAACAATTGCAGTAATTTCCATTTCTTTTCCTTTGATCTTTTACCAGCAACTCGCTTAGTGATGTCGATTCTTACGATCGGCCGGAGGAGGATTTCGTCGACGAATGCTTGGGCCACCGGTCGCCGGTTACTCTCTCCCTTCACCTCTCAATCTCCTTCTCCTTCAATTTCTCAGTTTCCGTCGCAGCAGACGCCCGAATCCCTTCCACACCCATTTCCTCCGCTTGGATCCCCCAGTTCCGGTCGGGCATGGCTTCATTCACATGCTAATCGTTTCGAGGTGAGTTCCACTCTGGTTGTCGTTTTCCTTTTGTTGTTGTTAGCGTTGGTTCATCTGAATTTTAAGACGTAAGCAAGTTCTATTTCAGTTTTTTTTTTCTTTTTTTCTTTTTCCGGATTTTGAGCTAGCAGCGCTTTCGATGATTCAATGTGTTTGTTCTGCACTAATCTATTCATAATTGTAGAGATCTTCTCCTTGTAACAATCGGGAGAAATTTAGAAATTAGGTGATTGTGAATGTAATCGTGGAATTGGTTCTTCATGCAGGCTAGGATAAAAGGCGTTTCGAAGATATGTCGCTTTTCTAGCCAGGCTTTAGACGGTCTTCCACTTTTTAGGTTGGTCGATATACCTTTGGCTCAAACTGGTGAAGGAATTGCAGAATGTGAGCTTCTTAAATGGTTTGTGCAAGAGGTAAAACCAACAATACTTCTTTCTTTCTTTCATTGTTGGTCCTTTTGTGAAAATGAATGAGGCTTGGTTGATTTCTTCAATCACTTATGTACTGTTCCAAGCTCAAACTGCTGCAATGTGGCTGTCATGCGAGAGCTGTTTGTGTTGGATCTCTGTCTGGTTTACGGAGGATGCAGGATCAGTTCAAGTGATTTCTATTCTGTCAGTTGATTGATTGGACAATTTCTTATTAAAATATAGATGGATGTTCATATTTAATCTTTTGGCAGGGGGATGAAGTTGAGGAGTTTCAACCACTTTGTGAAGTTCAGAGTGACAAAGCAACAATTGAAATAACTAGTCGCTACAAGGGAAAAGTTGGTCAACTTTTATATGTTCCGGGGGACATTGTTAAGGTGATATTTCATCACCCAATTGTTAAGAATATGAACTCATGGAAACTTTTGCAGTTTATGAATGGAGGGTAGAAAGAAATGTGAATGTCTATTTTCGGGGAAATTATTAAGTTGTCAATATATCAAATGAAAAGGTCACTAAACTTTTTGTTTCCTTTACACTGCAATGTTGTAGCTTGTAGGCTTCTTGCTCAAGTTTGATTGTTATATGTTATCGTTTTCAACCTTGATTACTGCTTAGGAAAAGCATTTTTCATTCATGCAGAAGCACACTAGTGGTAAATTATCGTAATATCACATTCTAGAGTTGGAAGAGAAAAGACACTAATGTTATGTCAAACGTTATCTCAGGTTGGAGAAACTCTTTTAAAAGTACACGTCGAGGGTTTCGAGGATGAGATCCAGGTTTCAGGGTTAACTGAAGGGCATTTGGCAAAACCCGAAGTAAAAGAGTCCCAACAGGACAAAAGCAAAAACTGTGGAGTTCTGTCCACACCTCCTGTTCGGGATCTTGCAAAAGAATATGGTATAGACATAAATGATGTCAGTGGAAGTGGTCCAGATGGAAGGGTATTAAAAGAAGACGTTCTTCAGTATGCTGTCAAAAAAGGAATTCTTGAAGACCATGTTTCTTCTGCTGCTAGTTTTAGGGTGCAATTTGATGAATCAGAGACTCACACTCATGCACCAGATGGAGTTATGTGGACCTACGAGGATAAGAAAGTTCAATTGAGGTATTATTCGTAAGGAGCTATTAAGTAGCCAAGAGTGAGTACTTGTCTAAATGAACGTAGTCATATCTTTTCATCATTTAAACAACTCCTGTCCTCTTGGTTTTTCTTGGAATAACTGAAGTGCACCTTGAAGTTCTTTTCAACTAGCAAAATAATTATTTCCTTTGCTATGTTCTAATTGTGTATTATTTGGTTGTGCAATTTATTCCATTTAGAGTTGTATGCAATTGATATGTGTTTTGTTTGCAGAGGATTCCAACGAGCAATGGTTAAATCCATGGCCATTGCAGCAAAGGTTCCCCATTTTCACTACGTAGAGGAGATCAATTGTGATGCACTTCTGGAGCTTAAAGCATCTTTCCAAGGAAATACTACCGAACCAAATGTCAAACACACGTCTCTTCCCTTATTGATAAAGTCCCTTTCTATGGCAATGAGCAAATACCCAATGCTAAATAGTTGCTTCAATGAAGATTCATTTGAGGTCACTCTCAAAGGTATGCAGTAAAGAGAGATGTTTGAATTGAATACATTGTAGAATATAATCCCCCAGATTAGGTCGTGTTCTCTTACTGTTTGCTGCTATGCCTAAGATGAAATCTTTCCTTGTTCTTATTTGAATCACAGTTACATTTACTTTTGCTTGCTGTAGGCTCCCATAATATTGGAATCGCCATGGCTACTCCACATGGTTTGGTTGTGCCAAATATAAAGAATGTTCAGTCCCTTTCTGTTTTGGAGGTTTGTAAATCACCGCCCACACATTTTTGCTTAAACGTAACATGGTCATCTAAAAACTTTTTAGTTTCTTAATTGGGTTAGGAGATTGAATACTCATCTTATGAAGCTTTCTTGTTTCTTAAAACAATTGCCATCATTTGCCAATGTTGCTAGCATGGCTTCCCTGTCACTAAAGACTTATATTTCAAATACATTTGCTTAGATCACAAAGGAGCTATCACGCTTACAACTACTAGCAATGGAAAACAAGCTCAGTCCTGGGGACATATCCGGTGGCACAATAACCTTAAGCAATATCGGAGCCATTGGTGGAAAATACGGTTCTCCTTTGCTCAACTTGCCTGAAGTATCCATCATCGCAATTGGCCGAATAAAAAAAGTTCCACAGATTGCCGATGATGGGAGCGTGTATCCATCATCAATCATGACGGTGAGCAACACAAAAATGTAAAGTCCATCTTATATTTATTATTGACTGACCAACCTTCCCTTCTATTTGGTCAGGTGAACATTGGTGCAGACCATAGAGTTCTGGATGGAGCAACAGTGGCAAGGTTTTGTAACGAGTGGAAGCGATTCATTGAAAATCCAGAGCTTCTGATATTGCATATGAGATGAGAGAAAGTAAATGTATCTGTATCCCCCCATTTGATATAATAAAATGAAAGGGGCCGCCACAAAAAGAAAAAAAGAACGAAATCTTACTTTCAAATTTCATACTGATCGTCGCTCTTTGGATAAGAAGAAAGAAAGAAAGAAGGCTCAATGGTTACGTGACGTAGTCAACTTTGAAAGCTAGATAATGGATTTTGACAAACAGCTCTATGGATTTTGAAAAACAGCTTCTACAAATTTTACGAACTTTCAATTCAAAAGTAACTTATTCATTTAACTTTTAATAAAGTATTTTATTAATGAATTAACTTTTTAA ATGTGGACCTACGAGGATAAGAAAGTTCAATTGAGAGGATTCCAACGAGCAATGGTTAAATCCATGGCCATTGCAGCAAAGGTTCCCCATTTTCACTACGTAGAGGAGATCAATTGTGATGCACTTCTGGAGCTTAAAGCATCTTTCCAAGGAAATACTACCGAACCAAATGTCAAACACACGTCTCTTCCCTTATTGATAAAGTCCCTTTCTATGGCAATGAGCAAATACCCAATGCTAAATAGTTGCTTCAATGAAGATTCATTTGAGGTCACTCTCAAAGGCTCCCATAATATTGGAATCGCCATGGCTACTCCACATGGTTTGGTTGTGCCAAATATAAAGAATGTTCAGTCCCTTTCTGTTTTGGAGATCACAAAGGAGCTATCACGCTTACAACTACTAGCAATGGAAAACAAGCTCAGTCCTGGGGACATATCCGGTGGCACAATAACCTTAAGCAATATCGGAGCCATTGGTGGAAAATACGGTTCTCCTTTGCTCAACTTGCCTGAAGTATCCATCATCGCAATTGGCCGAATAAAAAAAGTTCCACAGATTGCCGATGATGGGAGCGTGTATCCATCATCAATCATGACGGTGAACATTGGTGCAGACCATAGAGTTCTGGATGGAGCAACAGTGGCAAGGTTTTGTAACGAGTGGAAGCGATTCATTGAAAATCCAGAGCTTCTGATATTGCATATGAGATGA MWTYEDKKVQLRGFQRAMVKSMAIAAKVPHFHYVEEINCDALLELKASFQGNTTEPNVKHTSLPLLIKSLSMAMSKYPMLNSCFNEDSFEVTLKGSHNIGIAMATPHGLVVPNIKNVQSLSVLEITKELSRLQLLAMENKLSPGDISGGTITLSNIGAIGGKYGSPLLNLPEVSIIAIGRIKKVPQIADDGSVYPSSIMTVNIGADHRVLDGATVARFCNEWKRFIENPELLILHMR Homology
BLAST of Cucsat.G1287 vs. ExPASy Swiss-Prot
Match: Q9M7Z1 (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BCE2 PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.0e-44 Identity = 87/117 (74.36%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of Cucsat.G1287 vs. ExPASy Swiss-Prot
Match: P53395 (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Mus musculus OX=10090 GN=Dbt PE=1 SV=2) HSP 1 Score: 122.5 bits (306), Expect = 3.3e-27 Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of Cucsat.G1287 vs. ExPASy Swiss-Prot
Match: P11181 (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Bos taurus OX=9913 GN=DBT PE=1 SV=2) HSP 1 Score: 122.1 bits (305), Expect = 4.3e-27 Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of Cucsat.G1287 vs. ExPASy Swiss-Prot
Match: P11182 (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Homo sapiens OX=9606 GN=DBT PE=1 SV=3) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26 Identity = 57/117 (48.72%), Postives = 81/117 (69.23%), Query Frame = 0
BLAST of Cucsat.G1287 vs. ExPASy Swiss-Prot
Match: Q23571 (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Caenorhabditis elegans OX=6239 GN=dbt-1 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.4e-22 Identity = 52/118 (44.07%), Postives = 81/118 (68.64%), Query Frame = 0
BLAST of Cucsat.G1287 vs. NCBI nr
Match: XP_031739423.1 (lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 226 bits (576), Expect = 2.72e-70 Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Cucsat.G1287 vs. NCBI nr
Match: XP_031739422.1 (lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial isoform X1 [Cucumis sativus]) HSP 1 Score: 226 bits (576), Expect = 3.45e-70 Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Cucsat.G1287 vs. NCBI nr
Match: XP_004134223.1 (lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial isoform X3 [Cucumis sativus] >KGN57128.1 hypothetical protein Csa_010383 [Cucumis sativus]) HSP 1 Score: 226 bits (576), Expect = 3.00e-69 Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Cucsat.G1287 vs. NCBI nr
Match: XP_008438901.1 (PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Cucumis melo]) HSP 1 Score: 221 bits (564), Expect = 1.84e-67 Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0
BLAST of Cucsat.G1287 vs. NCBI nr
Match: KAA0049510.1 (lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex [Cucumis melo var. makuwa] >TYK16190.1 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex [Cucumis melo var. makuwa]) HSP 1 Score: 221 bits (564), Expect = 1.84e-67 Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0
BLAST of Cucsat.G1287 vs. ExPASy TrEMBL
Match: A0A0A0L5U6 (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Cucumis sativus OX=3659 GN=Csa_3G164470 PE=3 SV=1) HSP 1 Score: 226 bits (576), Expect = 1.45e-69 Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Cucsat.G1287 vs. ExPASy TrEMBL
Match: A0A5D3CXV6 (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001180 PE=3 SV=1) HSP 1 Score: 221 bits (564), Expect = 8.92e-68 Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0
BLAST of Cucsat.G1287 vs. ExPASy TrEMBL
Match: A0A1S3AX39 (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Cucumis melo OX=3656 GN=LOC103483861 PE=3 SV=1) HSP 1 Score: 221 bits (564), Expect = 8.92e-68 Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0
BLAST of Cucsat.G1287 vs. ExPASy TrEMBL
Match: A0A6J1C9A1 (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Momordica charantia OX=3673 GN=LOC111009145 PE=3 SV=1) HSP 1 Score: 210 bits (535), Expect = 1.91e-63 Identity = 102/117 (87.18%), Postives = 113/117 (96.58%), Query Frame = 0
BLAST of Cucsat.G1287 vs. ExPASy TrEMBL
Match: A0A2P5CLT9 (Lipoamide Acyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_142190 PE=3 SV=1) HSP 1 Score: 205 bits (521), Expect = 3.13e-63 Identity = 99/117 (84.62%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Cucsat.G1287 vs. TAIR 10
Match: AT3G06850.1 (2-oxoacid dehydrogenases acyltransferase family protein ) HSP 1 Score: 180.6 bits (457), Expect = 7.3e-46 Identity = 87/117 (74.36%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of Cucsat.G1287 vs. TAIR 10
Match: AT3G06850.2 (2-oxoacid dehydrogenases acyltransferase family protein ) HSP 1 Score: 180.6 bits (457), Expect = 7.3e-46 Identity = 87/117 (74.36%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of Cucsat.G1287 vs. TAIR 10
Match: AT3G13930.1 (Dihydrolipoamide acetyltransferase, long form protein ) HSP 1 Score: 75.9 bits (185), Expect = 2.5e-14 Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 0
BLAST of Cucsat.G1287 vs. TAIR 10
Match: AT1G54220.1 (Dihydrolipoamide acetyltransferase, long form protein ) HSP 1 Score: 74.7 bits (182), Expect = 5.6e-14 Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Cucsat.G1287 vs. TAIR 10
Match: AT1G54220.2 (Dihydrolipoamide acetyltransferase, long form protein ) HSP 1 Score: 74.7 bits (182), Expect = 5.6e-14 Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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