Cucsat.G12797 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G12797
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Thioredoxin domain-containing protein
Location	ctg1838: 4532947 .. 4535343 (-)
RNA-Seq Expression	Cucsat.G12797
Synteny	Cucsat.G12797

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGCTATTGGTGCAAGCAAAATAAATATAATAAAAAGTATTTTTAAATATAATAAAATAAACTAACAATATATATAATAAAATAAACTAACAATATTTACCAAATATTATATATATAACATTTTAAAAAAAATTAGTGTGACTGCATGAAATCATTTTACCAACTTTTATCCCCGAATCAAGTATACAAGTTTGTCAATTTCTTTTATTTGAATCCACTTTAAAATCCAATAATAACATTTATCAGAAACAAATAAAAAAAATGATATTTGAGATTCAAACAACATAGCTATGTTCCACCAAAATAGCTGATAATTAGCTTAATCAAAAGAGAAGAAAGGATAAGAAAAGTTGAGTGAATTAAATTATTGGGTAAAGTTGGGCCTCTCCATTTTATAGCCAAAAGAACACACAATGAGTTGGCTTATTGAAACACACTACTTTTACAATTGTACAACAAATTTACACGTGTGTGGACTCAACAATGGACTATAACATTCCAATAATAATTAGGCAACATTAGATTGTTTTGTTCCTCAATATCATCTGTTTCAAACTTGTGGATCTAAGAGAATGAACCACTTGATCTTTAGGTGGCACCTACCTACTTCTTCAAAATTATCATGTCCAAAATTGTAAATGCATTCTTGCAACAGAAGGTTAGAAGAGTTTAGTATGAATCAGTATAGAAAACCCATGAATGGTGAAATTGGAGAAACAATATAATATCCATTATCTAGTCTCCATGGCGACGGCAGGTTGCACCACGTGTCTTTGCACTTTCACTTTGTTATCTACATAACACCAAATCCAATGCGACGTTGCGTCCTCCTCTTATCCACTTTTTCCCAAAATTCCTCATTCCATTTCAAACCGCTCCATTTGTTTTCTTTTCCATTCCTTTCCTTTCTTCTCTTATTCTCTTCTTCTCCTCCATTTCCATCCCCATCTTCTTGGCTTTCAAGATCTTCCCTCTTCACCTACTTCATTTTCTCTCAATTTCCCACCAACCCCACTTCTTAATTCTTCCTATCTTTCTTCAATTCTTTTGATTTCGTCAGATTTTTCATCCATTTTAATGGCTGACGCTCTCAGCAAGATTGCTTTTCTTGCCCCTTTTCCCCCTTCTTCTTCTTCTTCTCATCGTCACCTTCATCGTCTTTCTCTACCTTTTTCCGAATTTAAATCGGTTGATTCTTCTTCCCATCCCTTTAATTGGAAACGAATTTCTGTGAAATTACCATCCACCTCGGGGCCGTTTTCTAGCAGTTACTCCTATGGCAGAAGAATTGAGTCTACTGAAAGGAATTCTGTTTCTCCTCCACGATCTTCGACGATTTCCCATGTTTGTACTGCCTTCTATCTCTAATTTTAATCTCTAACGTCCTTGAATTTTTAACTGATGTTAGGGTTTGTGGATTTACTTTTTGACTTTTGTTTGTATTGTTAGCTTCTTTGTGTTTGTTTTATTTGATTTTGATTGGGAATCTCAGCTGTCTCTTCATGGTTGTAATTTGGGTTTTTATGAGCTGAAATAGTTGCTGTATGCTTTTATATTTCTGTATTTTAATCCTTTTTCTTGTCTGGAATATGTAGTGATGAATTCCGATGTTGGTGTTTTATTTGTGGGAGAATCCCACTTTTGCAATTCGGTTAGCACTTGATTATGTATATTGTTTATTAACCCTTTTGTTTGCTGTTCAATAGAGTGGCTTTCGGATTCCAAAAGCTCAGAAATGGTGGGAAAAAGGTTTACAACCTAATATGAAGGAGGTAACCGGTGCACATGATTTTGTGGATTCTCTTTTAAATGCTGGGGATAAGCTTGTTATTGTCGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGGTCTTTCTCATTCTTTAGTGTCTAGAAAAATCTATCTTCTAAGTTTTTCTTGGTCCTGAAGTTTGTATACTGTATGCAGATATGCCAATTTGCTGAGATGTATCCTGATATCCAATTTTTGCAAGTAAACTATGAAGAACACAAATCCATGTGTTATAGTCTTGGTGTCCATGTGCTTCCCTTCTTCCGCTTCTACAGAGGCGCTCAAGGCCGTCTTTGCAGCTTTAGCTGCACTAATGCAACGGTAAGGAATCTTTAAATAGATTGGAAGTGTTCTGCTGTTCTAATGTTATTAGATGATTAGATCATAATATTTTATTTTGGACGTCTCTTCTTTGAAAGAAGCATGCTTTTCATGATTTTCCCTCACTTCGGTGTGGTCTACTAATTTAGGAGTTGTTTTTGGTACAATACTGCATTTCAATAGAGTATGTACTATGCAGTATTGTTGTCCTTTCATCAACGTTGGCCTGTCATTTATCGGTTTTAATTTTTCATTTAACCACATTTGAAACGATTTATTTGTTACTACCTGTTTTGTGGTTTTGTCTGAGCCTCATGAGTATGGAAATCCTTTTTCTTTTTCTTCTCTGCCGATGCATGCACTTGTTTCTCCATAAATTTATTGATGAAAAATTGGTCTGTTCTCACAGATTAAGAAATTCAAGGATGCGTTAGCCAAGCACAACACAGATCGATGCAGCCTTGGCCCCACGCAAGGGTTGGAGGAGAAAGATCTTGCGGCACTTGCCGCCAACAAAGAATTGTCTTTCGACTACACACCTAAACCAGCAGAAGAGGTCCCCATCTCCATCGCCATCCCCATCCCCATCCCCGCCACAGTGGGAGGGGTAAGAACTTCAGAATCAGAACGTTCACGTTCAGATGTGGGACAACTGCCTCTTCCTCTTTCTTCAACTATCCTCAAGTCGTCTGGCCAAGTCTCCATGGAGAATGCCTATGCGGGATGAAGCCGACCCCACCCATATTCTGTACTTAGCATGAGTGCTTTTGGTTGTAAAGGTTCAAGGGTCCTATATTATCGAGACCCAATGAAATAGTAGGGTTTGTTTCTTCTTTCTTTTTTACTTTTGGTGGCTTGGATCCCAGCCTGCTGATTCTTTAGAACATCAGCAGCTAGCTGTGTGATCAATCGATTCTATATTCAGTTGCGTTCTGTACATGGCTGTATAAAGCTTCTCTGCAAGATTATTAGTTAAATATCTCTATAAGATTGTAACTAGTAAATTGGTGTGAAACCAATGAAGAAACTTGTGAACGTTGTTGAATATCAAATATCATACTGAAAACCACCTTTGCTAATTCTTCATCCCTTGAGAATTTTCTTGCATAGAAGCTTCATTCAATATTCCAACTGCTAATTTATTTATTAGGCAGGAGGTCTAAGGAAGTCTCAGCTATTGACATGATCTAATCTCTTACCAAACTGTCTCTTGAACAAGCCTATTCATCACGATAAAATACAAAATTACCATCAAAATATT

Coding sequence (CDS)

ATGAAGGAGGTAACCGGTGCACATGATTTTGTGGATTCTCTTTTAAATGCTGGGGATAAGCTTGTTATTGTCGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCGAAGATATGCCAATTTGCTGAGATGTATCCTGATATCCAATTTTTGCAAGTAAACTATGAAGAACACAAATCCATGTGTTATAGTCTTGGTGTCCATGTGCTTCCCTTCTTCCGCTTCTACAGAGGCGCTCAAGGCCGTCTTTGCAGCTTTAGCTGCACTAATGCAACGATTAAGAAATTCAAGGATGCGTTAGCCAAGCACAACACAGATCGATGCAGCCTTGGCCCCACGCAAGGGTTGGAGGAGAAAGATCTTGCGGCACTTGCCGCCAACAAAGAATTGTCTTTCGACTACACACCTAAACCAGCAGAAGAGGTCCCCATCTCCATCGCCATCCCCATCCCCATCCCCGCCACAGTGGGAGGGGTAAGAACTTCAGAATCAGAACGTTCACGTTCAGATGTGGGACAACTGCCTCTTCCTCTTTCTTCAACTATCCTCAAGTCGTCTGGCCAAGTCTCCATGGAGAATGCCTATGCGGGATGA

Protein sequence

MKEVTGAHDFVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATVGGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG

Homology

[Close]

BLAST of Cucsat.G12797 vs. ExPASy Swiss-Prot
Match: O64654 (Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g08570 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.1e-49
Identity = 93/124 (75.00%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQFAEM PD+QFLQVNYEEHKSMCYSLGVHVLPFFRFYRG+QGR+CSFSCTNATIKKF
Sbjct: 138 KICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKF 197

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKP------AEEVPISIAIPI 120
           +DALAKH  DRCSLGPT+GLEEK+L ALAANKEL+F YTPKP      A     + ++P+
Sbjct: 198 RDALAKHGPDRCSLGPTKGLEEKELVALAANKELNFTYTPKPVPVEKEAATPDSNPSLPV 257

[Close]

BLAST of Cucsat.G12797 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.2e-45
Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQ AE  PD+ FLQVNYEEHKSMCYSL VHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 135 KICQIAEQNPDVLFLQVNYEEHKSMCYSLHVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 194

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVP 109
           +DALAKH  DRCSLGPT+GLEE +L ALAANK+L F+YT KP E VP
Sbjct: 195 RDALAKHKPDRCSLGPTRGLEESELLALAANKDLQFNYTKKP-ELVP 240

[Close]

BLAST of Cucsat.G12797 vs. ExPASy Swiss-Prot
Match: Q6Z4N3 (Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0684100 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.7e-40
Identity = 87/147 (59.18%), Postives = 104/147 (70.75%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +I Q AE  P++ FLQVNYE+HKSMCYSL VHVLPFFRFYRGAQGR+ SFSCTNATIKKF
Sbjct: 134 KIAQLAEKNPEVLFLQVNYEKHKSMCYSLHVHVLPFFRFYRGAQGRVSSFSCTNATIKKF 193

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIP------- 121
           KDALAKH  DRC LGP +GLEE +L ALA N++L+F YTP   + VPI+ A+        
Sbjct: 194 KDALAKHGPDRCGLGPAKGLEESELMALAINRDLNFTYTPN-QDLVPIADALLKEAAAPG 253

Query: 122 ---IPIPATVGGVRTSESERSRSDVGQ 139
              +P+PAT   +    SE S    G+
Sbjct: 254 GPWLPLPATATQLFIQGSENSLLSSGR 279

[Close]

BLAST of Cucsat.G12797 vs. ExPASy Swiss-Prot
Match: O22779 (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.7e-39
Identity = 69/100 (69.00%), Postives = 88/100 (88.00%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +IC+ AE  P+++FLQVNYEEH+S+C SL +HVLPFFRFYRG+ GR+CSFSCTNATI+KF
Sbjct: 134 KICKIAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKF 193

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTP 102
           K+AL KH  ++CS+G T+GLEEK+L A+AANK+LSFDY P
Sbjct: 194 KEALEKHGREQCSIGETKGLEEKELVAMAANKDLSFDYKP 233

[Close]

BLAST of Cucsat.G12797 vs. ExPASy Swiss-Prot
Match: Q9XFI1 (Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g61440 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.6e-30
Identity = 60/97 (61.86%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQ AE  P++ FL+VN EE ++MC+ L VHVLPFF+FYRGA+G++CSFSCT ATI KF
Sbjct: 126 KICQLAETNPNVMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIATINKF 185

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFD 99
           K AL KH ++RCSLG  +GL+EK+LAALA+  EL  +
Sbjct: 186 KKALDKHGSERCSLGDAKGLDEKELAALASVGELKMN 222

[Close]

BLAST of Cucsat.G12797 vs. NCBI nr
Match: XP_031738086.1 (thioredoxin-like 1-1, chloroplastic isoform X4 [Cucumis sativus])

HSP 1 Score: 323 bits (829), Expect = 7.38e-111
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 46  EICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 105

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 121
           KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV
Sbjct: 106 KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 165

Query: 122 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 162
           GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG
Sbjct: 166 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 206

[Close]

BLAST of Cucsat.G12797 vs. NCBI nr
Match: XP_031738085.1 (thioredoxin-like 1-1, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 323 bits (828), Expect = 3.79e-110
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 83  KICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 142

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 121
           KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV
Sbjct: 143 KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 202

Query: 122 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 162
           GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG
Sbjct: 203 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 243

[Close]

BLAST of Cucsat.G12797 vs. NCBI nr
Match: XP_031738084.1 (thioredoxin-like 1-1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 323 bits (829), Expect = 7.00e-110
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 111 EICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 170

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 121
           KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV
Sbjct: 171 KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 230

Query: 122 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 162
           GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG
Sbjct: 231 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 271

[Close]

BLAST of Cucsat.G12797 vs. NCBI nr
Match: XP_004141145.1 (thioredoxin-like 1-1, chloroplastic isoform X1 [Cucumis sativus] >KGN59768.1 hypothetical protein Csa_002050 [Cucumis sativus])

HSP 1 Score: 323 bits (828), Expect = 3.48e-109
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 148 KICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 207

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 121
           KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV
Sbjct: 208 KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 267

Query: 122 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 162
           GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG
Sbjct: 268 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 308

[Close]

BLAST of Cucsat.G12797 vs. NCBI nr
Match: XP_016903368.1 (PREDICTED: thioredoxin-like 1-1, chloroplastic [Cucumis melo] >XP_016903369.1 PREDICTED: thioredoxin-like 1-1, chloroplastic [Cucumis melo])

HSP 1 Score: 281 bits (720), Expect = 1.92e-94
Identity = 143/161 (88.82%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 40  KICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 99

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 121
           KDALAKHNTDRCSLGPTQGLEEKDL ALAANKELSF+YTPKPAEEVPI      PIPATV
Sbjct: 100 KDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTPKPAEEVPI------PIPATV 159

Query: 122 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 162
           GGVRT ESERS SD+ +LPLPL STIL SSGQV+ ENAYAG
Sbjct: 160 GGVRTLESERSSSDM-ELPLPLPSTILTSSGQVTKENAYAG 193

[Close]

BLAST of Cucsat.G12797 vs. ExPASy TrEMBL
Match: A0A0A0LD91 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G844860 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.69e-109
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 148 KICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 207

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 121
           KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV
Sbjct: 208 KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 267

Query: 122 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 162
           GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG
Sbjct: 268 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 308

[Close]

BLAST of Cucsat.G12797 vs. ExPASy TrEMBL
Match: A0A1S4E558 (thioredoxin-like 1-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502978 PE=4 SV=1)

HSP 1 Score: 281 bits (720), Expect = 9.29e-95
Identity = 143/161 (88.82%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 40  KICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 99

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 121
           KDALAKHNTDRCSLGPTQGLEEKDL ALAANKELSF+YTPKPAEEVPI      PIPATV
Sbjct: 100 KDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTPKPAEEVPI------PIPATV 159

Query: 122 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 162
           GGVRT ESERS SD+ +LPLPL STIL SSGQV+ ENAYAG
Sbjct: 160 GGVRTLESERSSSDM-ELPLPLPSTILTSSGQVTKENAYAG 193

[Close]

BLAST of Cucsat.G12797 vs. ExPASy TrEMBL
Match: A0A5A7U7I3 (Thioredoxin-like 1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00160 PE=4 SV=1)

HSP 1 Score: 281 bits (720), Expect = 4.02e-94
Identity = 143/161 (88.82%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           +ICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 83  KICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 142

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 121
           KDALAKHNTDRCSLGPTQGLEEKDL ALAANKELSF+YTPKPAEEVPI      PIPATV
Sbjct: 143 KDALAKHNTDRCSLGPTQGLEEKDLVALAANKELSFNYTPKPAEEVPI------PIPATV 202

Query: 122 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 162
           GGVRT ESERS SD+ +LPLPL STIL SSGQV+ ENAYAG
Sbjct: 203 GGVRTLESERSSSDM-ELPLPLPSTILTSSGQVTKENAYAG 236

[Close]

BLAST of Cucsat.G12797 vs. ExPASy TrEMBL
Match: A0A6J1EYA1 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439903 PE=4 SV=1)

HSP 1 Score: 264 bits (675), Expect = 1.95e-86
Identity = 133/161 (82.61%), Postives = 142/161 (88.20%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           ++CQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 142 KMCQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 201

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 121
           KDALAKHNT+RCSLGPTQGLEEKDL ALAAN+ELSF+YTPKPAEEVP+      PIPATV
Sbjct: 202 KDALAKHNTERCSLGPTQGLEEKDLVALAANRELSFNYTPKPAEEVPM------PIPATV 261

Query: 122 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 162
           GG+  SE ++SRSD  Q PLPL ST LKS G VS ENAY G
Sbjct: 262 GGLGISELDKSRSDSEQPPLPLPSTFLKS-GHVSKENAYVG 295

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BLAST of Cucsat.G12797 vs. ExPASy TrEMBL
Match: A0A6J1ICM9 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471322 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 3.93e-86
Identity = 133/161 (82.61%), Postives = 142/161 (88.20%), Query Frame = 0


Query: 2   QICQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 61
           ++CQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF
Sbjct: 142 KMCQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRLCSFSCTNATIKKF 201

Query: 62  KDALAKHNTDRCSLGPTQGLEEKDLAALAANKELSFDYTPKPAEEVPISIAIPIPIPATV 121
           K ALAKHNT+RCSLGPTQGLEEKDL ALAAN+ELSF+YTPKPAEEVP+      PIPATV
Sbjct: 202 KYALAKHNTERCSLGPTQGLEEKDLVALAANRELSFNYTPKPAEEVPM------PIPATV 261

Query: 122 GGVRTSESERSRSDVGQLPLPLSSTILKSSGQVSMENAYAG 162
           GG+  SE ++SRSD  QLPLPL ST LKS G VS ENAY G
Sbjct: 262 GGLGISELDKSRSDSEQLPLPLPSTFLKS-GHVSKENAYVG 295

The following BLAST results are available for this feature:

BLAST of Cucsat.G12797 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64654	1.1e-49	75.00	Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g08570...	[more]
Q10M18	6.2e-45	81.31	Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q6Z4N3	2.7e-40	59.18	Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
O22779	8.7e-39	69.00	Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270...	[more]
Q9XFI1	5.6e-30	61.86	Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g61440...	[more]

BLAST of Cucsat.G12797 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738086.1	7.38e-111	99.38	thioredoxin-like 1-1, chloroplastic isoform X4 [Cucumis sativus]	[more]
XP_031738085.1	3.79e-110	99.38	thioredoxin-like 1-1, chloroplastic isoform X3 [Cucumis sativus]	[more]
XP_031738084.1	7.00e-110	99.38	thioredoxin-like 1-1, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_004141145.1	3.48e-109	99.38	thioredoxin-like 1-1, chloroplastic isoform X1 [Cucumis sativus] >KGN59768.1 hyp...	[more]
XP_016903368.1	1.92e-94	88.82	PREDICTED: thioredoxin-like 1-1, chloroplastic [Cucumis melo] >XP_016903369.1 PR...	[more]

BLAST of Cucsat.G12797 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD91	1.69e-109	99.38	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G844860...	[more]
A0A1S4E558	9.29e-95	88.82	thioredoxin-like 1-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502978 PE=4...	[more]
A0A5A7U7I3	4.02e-94	88.82	Thioredoxin-like 1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734...	[more]
A0A6J1EYA1	1.95e-86	82.61	thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143990...	[more]
A0A6J1ICM9	3.93e-86	82.61	thioredoxin-like 1-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471322 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 117..191 e-value: 1.3E-14 score: 54.0
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 98..240 score: 10.58246
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 101..221 e-value: 1.1E-18 score: 69.1
None	No IPR available	PANTHER	PTHR43601	THIOREDOXIN, MITOCHONDRIAL	coord: 41..292
None	No IPR available	PANTHER	PTHR43601:SF9	THIOREDOXIN-LIKE 1-3, CHLOROPLASTIC	coord: 41..292
None	No IPR available	CDD	cd02947	TRX_family	coord: 125..191 e-value: 1.05838E-18 score: 77.5984
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 98..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G12797.T3	Cucsat.G12797.T3	mRNA
Cucsat.G12797.T2	Cucsat.G12797.T2	mRNA
Cucsat.G12797.T1	Cucsat.G12797.T1	mRNA
Cucsat.G12797.T8	Cucsat.G12797.T8	mRNA
Cucsat.G12797.T4	Cucsat.G12797.T4	mRNA
Cucsat.G12797.T5	Cucsat.G12797.T5	mRNA
Cucsat.G12797.T6	Cucsat.G12797.T6	mRNA
Cucsat.G12797.T7	Cucsat.G12797.T7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0009507	chloroplast