Cucsat.G11203 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G11203
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Ferredoxin
Location	ctg1780: 184801 .. 186849 (+)
RNA-Seq Expression	Cucsat.G11203
Synteny	Cucsat.G11203

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTAGATGGTTTCCATGATTGAATTAGTTCTTTTTTTTTTAAAAAAGTCACAAATGGGTAGCCGCCTGACCTACCTTTTTATAGAGCATAAAAGGGAAGAAGCATAAGATGTAAGGAACTTGGATCTGCTTCTTCACTCTCCGCCTCTTCGAACCTCGCAAATGGCAAATTCTCCATTCATCCCCCCTCTTCCCTCTTCCTCCTCTGGGCCTTCACCATTCTCCAAAAGCCATTTTTCTTCCTCTTTCTTTATATATATATATATATATATATATATATTGCCCTAATATTCGCATCCTTCAACCACTTACGTCTCCCTTTTGATTTCCTGTCCTCGCTTTCTCCGCTGCCTCTCTCTTTCTGTAAGCTTCTCTTCCCCCATTTCCTTCCTTCGTTTATATTTTCTTTCTATCTTTTGCTATGAAAATCAACTAATTTGCTTCTCAACATATTTGTTCTCTAACCATCTCCCTCATCAAAATGCCCTTTTCCTTTTACCATTTCGCTATTTACTGTATTTCCTCATTTCCCATATTCTCTTCTCTTTTTACATCACTGCCTTTATTTTTGTTGCTTTCGATCGTTTTAGTTAGATAATATCAATCTGTGCTAACTTCTGTTTCTTCAAATAAAACCTTTGGATTCTGTTGACATTTTGTTCTTAACTAATGCAACTGATCTGGGTTGGAATTGAATGGTTTTGTTCATTACTTATGGAGCTTCGAGTGAAGAGCAGATAAAGCCCTTAGGTTGCATCTTCTCATAATGCTCCATACACCAATTTGCCTCCATTAACATTGAATAGCTTTCTGCTGTGCTACCTCATTTGTTCTTTCAAGAGGCATACAAAATCACTGAACCTATCATTTATTGCATTCGTTTCTCTATGCTCTGAATTGAAACACTCGATGCTTAGTTTTCACACACACGCAAATACTCCATTGCTGTTAAATGATACAACAGTTAATTTACTCTTAAGCTTAAGCATTTGAGTCAATAGGTGTTTTATAACGTTGCTGGAGCAGAGAGCAGATCCTATTTCAAACTCGTCCATTGTTATTTCCTTCTCAATTTACATCGATGTCGATTTCTATTTGTTGGTTCTTCTAAAATTAGAAGATATAATATTAAGTTTACGCTCCCTCCATTAGTTTAAGCTTTTGGGTCAATTGGTGTTTTAAGAATTAGAAAGGTAAATGAAGAAATCGAGTATTTTCTGCTGAATTGTGAGATAAAATGAAAAAGAAAATGGTTCTGCATTTTTCATACCTCTGCCATATGGAGGTTCATTGTTAGAGTATGATCATCATCCATTCTGGTGCTTGTGGGATGTGCTCTATATTCTAAATATTCTGTTTGATCTTTTGTTACTTGCTTGTTCCCCGGTGTAGCCTTTATTTTTCTCACATGCTTTTAGGTTTTGATTGATTTGATTTGTAAACCACACCAGTTTAAATGTGTTTCATGAATTTAGGAGCAGAAATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAGTCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGAGTATGATAGTTTGAATGATACAGAGTGTTTTCTTGTCTCATGGTTTTCATTTGTAATGTCATATTATTAAAAAATGAAAAAAATGAAAAAATAAATCAAATGTGTGAACTTTCTCGTCATGCACTTTCCTTGTTATTATTATCTACTTACATTAAGCATGAGAAATTTTGTACAATTATTTCTTTGAACCTATGGACATTGACATTCTCATTATATCATTGAAAAA

Coding sequence (CDS)

ATGTCAACCATGTCAACTGCAAAGCTCCCTACCCACTTCATGTACAACACACAATCTAAAAATCAACTCGGTAGCACCATCATCAAGTGTCCATCGTCAATTGGATCTACGAGAAACATTTTGAAGTCCTTTGGCTTGAATTCACGTCCCTCATTCAGAGCCTGTGCAATGGCAGCTTTCAAAATTAAACTTGTCGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTATATTCTTGATGCAGCTGAAGAAGCGGGAATAGACTTACCTTATTCTTGCAGGGCAGGTGCGTGTTCTACGTGTGCTGGGAAAATAGTTTCGGGTTCGGTTGATCAATCAGACGGGTCATTCCTTGACGATGATCAAATGGCAAATGGTTACTTGTTAACCTGTATTTCACTCCCAACTGCAGATTGTGTGATTCACACACACAAAGAAGGAGAACTGATCTGA

Protein sequence

MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI

Homology

[Close]

BLAST of Cucsat.G11203 vs. ExPASy Swiss-Prot
Match: P27788 (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.5e-43
Identity = 83/132 (62.88%), Postives = 97/132 (73.48%), Query Frame = 0


Query: 22  QLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHEFEASDDTY 81
           Q   T +K PSS+     + K   L +       AMA +K+KLV P G+EHEF+A DD Y
Sbjct: 20  QASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAY 79

Query: 82  ILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLLTCISLPTA 141
           ILDAAE AG++LPYSCRAGACSTCAGKI SGSVDQSDGSFLDD Q   GY+LTC+S P +
Sbjct: 80  ILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKS 139

Query: 142 DCVIHTHKEGEL 154
           DCVIHTHKEG+L
Sbjct: 140 DCVIHTHKEGDL 151

[Close]

BLAST of Cucsat.G11203 vs. ExPASy Swiss-Prot
Match: Q9ZQG8 (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-41
Identity = 86/154 (55.84%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 4   MSTAKLPTHFMYNTQSKNQLGSTIIKCPS---SIGSTRNILKSFGLN-SRPSFRACAMAA 63
           M+T ++ +  M     ++Q  + +I   S   S+GST+ + +SFGL  S  S  A   A 
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  FKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           +K+KL+ P G+E EFE  DD YILDAAEEAG+DLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFL+D  +  GY+LTC++ P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of Cucsat.G11203 vs. ExPASy Swiss-Prot
Match: P94044 (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 83/154 (53.90%), Postives = 100/154 (64.94%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MST +  +LP      +       +      S  G  R   ++ G      F A A A  
Sbjct: 1   MSTATAPRLPAPRSGASYHYQTTAAPAANTLSFAGHARQAARASGPRLSSRFVASAAAVL 60

Query: 61  -KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDG 120
            K+KLV P G EHEFEA DDTYIL+AAE AG++LP+SCRAG+CSTCAG++ +G VDQS+G
Sbjct: 61  HKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEG 120

Query: 121 SFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SFLDD QMA GYLLTCIS P ADCVIHTHKE +L
Sbjct: 121 SFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154

[Close]

BLAST of Cucsat.G11203 vs. ExPASy Swiss-Prot
Match: P14937 (Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-35
Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 58  AAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQS 117
           A +K+KL+ P G+E+EFE  DD +ILDAAEEAG+DLPYSCRAGACSTCAG+IV G VDQS
Sbjct: 2   AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQS 61

Query: 118 DGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           +GSFL+DD    G++LTC++ P +DCVIHTHKE EL
Sbjct: 62  EGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97

[Close]

BLAST of Cucsat.G11203 vs. ExPASy Swiss-Prot
Match: P00243 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) OX=1147 PE=1 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 4.2e-35
Identity = 69/97 (71.13%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 57  MAAFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQ 116
           MA++ +KL+ P G E+  E SDDTYILDAAEEAG+DLPYSCRAGACSTCAGKI +GSVDQ
Sbjct: 1   MASYTVKLITPDG-ENSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQ 60

Query: 117 SDGSFLDDDQMANGYLLTCISLPTADCVIHTHKEGEL 154
           SD SFLDDDQ+  GY+LTC++ PT+DC I THKE +L
Sbjct: 61  SDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDL 96

[Close]

BLAST of Cucsat.G11203 vs. NCBI nr
Match: KGN64931.1 (hypothetical protein Csa_022774 [Cucumis sativus])

HSP 1 Score: 313 bits (803), Expect = 8.01e-108
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154
           FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of Cucsat.G11203 vs. NCBI nr
Match: KAA0035450.1 (ferredoxin, root R-B1-like [Cucumis melo var. makuwa])

HSP 1 Score: 297 bits (760), Expect = 2.90e-101
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA F
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154
           FLDDDQMA GYLLTC+SLPTADCVIHTHKE ELI
Sbjct: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 154

[Close]

BLAST of Cucsat.G11203 vs. NCBI nr
Match: TYK31073.1 (ferredoxin, root R-B2 [Cucumis melo var. makuwa])

HSP 1 Score: 273 bits (697), Expect = 7.52e-92
Identity = 133/141 (94.33%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 14  MYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHE 73
           MYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA FKIKLVEPCGKEHE
Sbjct: 1   MYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVFKIKLVEPCGKEHE 60

Query: 74  FEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLL 133
           FEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGSFLDDDQMA GYLL
Sbjct: 61  FEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLDDDQMAKGYLL 120

Query: 134 TCISLPTADCVIHTHKEGELI 154
           TC+SLPTADCVIHTHKE ELI
Sbjct: 121 TCVSLPTADCVIHTHKEEELI 141

[Close]

BLAST of Cucsat.G11203 vs. NCBI nr
Match: XP_038893731.1 (ferredoxin, root R-B2 [Benincasa hispida] >XP_038893732.1 ferredoxin, root R-B2 [Benincasa hispida])

HSP 1 Score: 268 bits (685), Expect = 7.90e-90
Identity = 132/154 (85.71%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKL THFMYN   KN+L STIIKCPSSI S  NI K FGL SRPSFRACAMA +
Sbjct: 1   MSTMSTAKLSTHFMYNAPCKNRLRSTIIKCPSSISSMSNISKFFGLKSRPSFRACAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEP G EHEFEASDD YILDAAEEAGIDLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPSGTEHEFEASDDAYILDAAEEAGIDLPYSCRAGACSTCAGKMVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGEL+
Sbjct: 121 FLDDSQMAEGYLLTCVSLPTADCVIHTHKEGELL 154

[Close]

BLAST of Cucsat.G11203 vs. NCBI nr
Match: XP_022142635.1 (ferredoxin, root R-B2 [Momordica charantia])

HSP 1 Score: 259 bits (663), Expect = 1.78e-86
Identity = 127/154 (82.47%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTA LP+ F  N   KN+   TIIKCPSSIGS  NI +SFGL S PSFR  AMA +
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of Cucsat.G11203 vs. ExPASy TrEMBL
Match: A0A0A0LY90 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1)

HSP 1 Score: 313 bits (803), Expect = 3.88e-108
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154
           FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI
Sbjct: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154

[Close]

BLAST of Cucsat.G11203 vs. ExPASy TrEMBL
Match: A0A5A7SWN7 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00770 PE=3 SV=1)

HSP 1 Score: 297 bits (760), Expect = 1.40e-101
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA F
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154
           FLDDDQMA GYLLTC+SLPTADCVIHTHKE ELI
Sbjct: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 154

[Close]

BLAST of Cucsat.G11203 vs. ExPASy TrEMBL
Match: A0A5D3E4N5 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003470 PE=3 SV=1)

HSP 1 Score: 273 bits (697), Expect = 3.64e-92
Identity = 133/141 (94.33%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 14  MYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAFKIKLVEPCGKEHE 73
           MYNTQSKNQLGSTIIKCPSSIGSTRNI KSFGLNSRPSFRA AMA FKIKLVEPCGKEHE
Sbjct: 1   MYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVFKIKLVEPCGKEHE 60

Query: 74  FEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDDQMANGYLL 133
           FEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGKIVSGSV+QSDGSFLDDDQMA GYLL
Sbjct: 61  FEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGSFLDDDQMAKGYLL 120

Query: 134 TCISLPTADCVIHTHKEGELI 154
           TC+SLPTADCVIHTHKE ELI
Sbjct: 121 TCVSLPTADCVIHTHKEEELI 141

[Close]

BLAST of Cucsat.G11203 vs. ExPASy TrEMBL
Match: A0A6J1CLH4 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1)

HSP 1 Score: 259 bits (663), Expect = 8.64e-87
Identity = 127/154 (82.47%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMAAF 60
           MSTMSTA LP+ F  N   KN+   TIIKCPSSIGS  NI +SFGL S PSFR  AMA +
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154
           FLDD QMA GYLLTC+SLPTADCVIHTHKEGELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of Cucsat.G11203 vs. ExPASy TrEMBL
Match: A0A6J1FZ54 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 254 bits (650), Expect = 8.86e-85
Identity = 129/156 (82.69%), Postives = 135/156 (86.54%), Query Frame = 0


Query: 1   MSTMSTAKLPTHFMYNTQS--KNQLGSTIIKCPSSIGSTRNILKSFGLNSRPSFRACAMA 60
           MSTMSTAKLP+  M+NT +  KNQ  STIIKCPSSIGST NI KSFGL S PS R  AMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  AFKIKLVEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKIVSGSVDQSD 120
            +KIKL+EPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDDQMANGYLLTCISLPTADCVIHTHKEGELI 154
           GSFLDD QM  GYLLTCIS PT+DCVI THKEGELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

The following BLAST results are available for this feature:

BLAST of Cucsat.G11203 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27788	5.5e-43	62.88	Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1	[more]
Q9ZQG8	2.3e-41	55.84	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1	[more]
P94044	1.2e-37	53.90	Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1	[more]
P14937	1.1e-35	68.75	Ferredoxin, root R-B2 OS=Raphanus sativus OX=3726 PE=1 SV=1	[more]
P00243	4.2e-35	71.13	Ferredoxin OS=Synechocystis sp. (strain PCC 6714) OX=1147 PE=1 SV=2	[more]

BLAST of Cucsat.G11203 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64931.1	8.01e-108	100.00	hypothetical protein Csa_022774 [Cucumis sativus]	[more]
KAA0035450.1	2.90e-101	94.81	ferredoxin, root R-B1-like [Cucumis melo var. makuwa]	[more]
TYK31073.1	7.52e-92	94.33	ferredoxin, root R-B2 [Cucumis melo var. makuwa]	[more]
XP_038893731.1	7.90e-90	85.71	ferredoxin, root R-B2 [Benincasa hispida] >XP_038893732.1 ferredoxin, root R-B2 ...	[more]
XP_022142635.1	1.78e-86	82.47	ferredoxin, root R-B2 [Momordica charantia]	[more]

BLAST of Cucsat.G11203 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY90	3.88e-108	100.00	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_1G163160 PE=3 SV=1	[more]
A0A5A7SWN7	1.40e-101	94.81	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00770 PE=...	[more]
A0A5D3E4N5	3.64e-92	94.33	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003470 PE...	[more]
A0A6J1CLH4	8.64e-87	82.47	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1	[more]
A0A6J1FZ54	8.86e-85	82.69	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 57..154 e-value: 5.3E-34 score: 117.9
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 59..153 e-value: 3.3E-46 score: 153.0
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 66..140 e-value: 6.0E-22 score: 77.4
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 60..151 score: 12.679967
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 65..146 e-value: 3.39935E-33 score: 110.562
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 4..153
None	No IPR available	PANTHER	PTHR43112:SF16	FERREDOXIN	coord: 4..153
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 97..105
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 49..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G11203.T1	Cucsat.G11203.T1	mRNA
Cucsat.G11203.T4	Cucsat.G11203.T4	mRNA
Cucsat.G11203.T2	Cucsat.G11203.T2	mRNA
Cucsat.G11203.T3	Cucsat.G11203.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding