Cucsat.G1016 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G1016
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	serine/arginine-rich splicing factor RS31-like
Location	ctg1: 6735346 .. 6738963 (+)
RNA-Seq Expression	Cucsat.G1016
Synteny	Cucsat.G1016

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAAGAAAACTCAAAATTATGACTTTTTTTTTCCCCCCAACATCTTCTTCTACTGAAGACGTGAATGAACAGAGCTTAACAACAACGACTGAGTTGCATCATCGCCATTGACAACCAAAGCTTGAAAAAGAAGAACGAATGAAAAATCAATGGGTTTCTTTTTGTTCTTTTCGAAATTCGAAGAAACGAGTGGCTAAGAAATTTTCCTTATCCTTGGTTGTTGCAATTTTAGTTTCACATAAATCCAATCCCCAACACTTCCCTTTCCATTAATCTCTCCGTTCGTTCTCTCCTCCATGGATACTTTAACAACACCCTCTGTTTCTTCAGCTCTCAGAGTTCCGTCAAGAACCCTAACTTCATCTCGCGACTTTCTTCACCTCAAGAATCCCACCGCTCATCTCCCTCATCGCTCCCCTTCTCGTACATCCAACTCAATCTCAAAACCTCCAAATTTTCTCTCCACTCCCCAAACCCTAAATCCCTCCATCCCCTTTTCCACCCCCCGCCGCTCCTCTTCTCCACTCCTCCACCGACGCCCTGCCTCAGGTTACGCCGCTGCACTCCTCGACGCATCTCAATCTACCGGCACGATTCACTCGGTGGCGAAGGATGTCGGGAGATTCTCGAAGCTGCTGAGAGGGAAGCGAATTGGAAGGGTCTTGAATGATCCGTTGGTGGGAGACGAGGAGAAAGGGCGACTGGTGAAGGAAATTGCAGTGAAGGGTGGGTTTGAGAGGCAGGTGGTGAAGTTAACGAAGATGCTGATTGAGAAGAGCAAACTAAGTATTTTAACGGAGGTGTTTAGCGAATTCGAAAGGGTTTATGATGAGCTCTGTGGAACGGAAGTGGTGATGGTTTCTTCGAGCAAGAAGATGGAGGAAGAAGAGTTGATTGGGATTGCGAAGAACGTGCAAAGGCTGAGTGGGGCTATCAAAGTGAAGGTCAGAAGCTTCATTCATGGCGGATTAATGGTTTAGAGTTGATACAATCAATAGCAATATGTTGGATATGAAGTTTGTAATTCATGAACGATTGCAAAGATTTCAGAATACTGCTATCGAATCAAAATTGTTGGATTGAAGTTCTTATGTACAATCACCATGATTCACAACATCACATTTTTTATCCAAAACCAATTTTGGAAATCAAAGGATTGTTGTCTACAAGGCAATCTTTGATTGTGTAATTCAAATCACTACATAATCTCACAACAACAAATTTATCTTTTTCATTTGATCAAATTTCTGTTATGATTGCCCAAGCATTGTTATGTTTGAATGGTGATTCTTTGACTTAAAAAGATAAGTTTTCTTTTGAAGAAACTTTAATATACACAGTATTTCATATTTTTGGACTCAACTTTATTGGTTGAAGTAGATGGTGTATAGTGTATTTAGAAGAGAATATGATAGTTAATGACAATTTATAAATATAGTAAAATCTTTTAAAATATTATGAGTTAGAGCATATAAAAAAGGTTGATCTATTACTTATAGAATAAAATTACCTATATATTTGATGTTGGTAATTGAATTTTTTTAAAAATGTTAGTATCCATAGTTATTTTTTCTAAAATCGAGAAATTAGGGATCAAAAAGTGAAAGGAACCGAGAATTGGGCCTTCTTCCACACAAAGCCCAAACATCCTTCTAAAAATTCCAAATCTCCAAAATACCCTTTAGGGAGTAAGGGTGAAATCTGGGTCGACGGTAGTCTTGCATAGGAAAGTCAGATAATCGGACGGTGTGAAAGGAAGAACATCAAGAGTACCGGTTTTGCTTTGCGGTTTAAAATGAATCGATTTGCGTCATTAGGGCTTCTTTGAAAAAAGAAAAGACACAGCCTTTCTCTTCCTCTCTCTCCTAGGGTTTCTCTGTTCTGTTCGAATCCGAGAATCTCCAAGGTTTGTTCTCTTCAATCCTTTGGTAATTGATCCAATCGATCGTTTTACTTTTCGTTTCTGGTCAAACCCCCAAACTAAGTTATTTCCTTTCTTTCATCGTTTGATTCGAAAGAACATAGGTCGATTCATGTCGATGAAGTTGTTTATTATATATATATATACACACACATATATGGAGGAAGCTGTTATCTTTTTTTCACTTTTCGTCTGATTAACGTTCGAGCTTATTGATTTCGCTTTGTTTCGGTTTCGTATTTTCTACAGTACGATCTTTTGTAGCAACGATGAGGCCGATATTTGTTGGGAACTTTGGGTA

Coding sequence (CDS)

ATGGATACTTTAACAACACCCTCTGTTTCTTCAGCTCTCAGAGTTCCGTCAAGAACCCTAACTTCATCTCGCGACTTTCTTCACCTCAAGAATCCCACCGCTCATCTCCCTCATCGCTCCCCTTCTCGTACATCCAACTCAATCTCAAAACCTCCAAATTTTCTCTCCACTCCCCAAACCCTAAATCCCTCCATCCCCTTTTCCACCCCCCGCCGCTCCTCTTCTCCACTCCTCCACCGACGCCCTGCCTCAGGTTACGCCGCTGCACTCCTCGACGCATCTCAATCTACCGGCACGATTCACTCGGTGGCGAAGGATGTCGGGAGATTCTCGAAGCTGCTGAGAGGGAAGCGAATTGGAAGGGTCTTGAATGATCCGTTGGTGGGAGACGAGGAGAAAGGGCGACTGGTGAAGGAAATTGCAGTGAAGGGTGGGTTTGAGAGGCAGGTGGTGAAGTTAACGAAGATGCTGATTGAGAAGAGCAAACTAAGTATTTTAACGGAGGTGTTTAGCGAATTCGAAAGGGTTTATGATGAGCTCTGTGGAACGGAAGTGGTGATGGTTTCTTCGAGCAAGAAGATGGAGGAAGAAGAGTTGATTGGGATTGCGAAGAACGTGCAAAGGCTGAGTGGGGCTATCAAAGTGAAGTACGATCTTTTGTAG

Protein sequence

MDTLTTPSVSSALRVPSRTLTSSRDFLHLKNPTAHLPHRSPSRTSNSISKPPNFLSTPQTLNPSIPFSTPRRSSSPLLHRRPASGYAAALLDASQSTGTIHSVAKDVGRFSKLLRGKRIGRVLNDPLVGDEEKGRLVKEIAVKGGFERQVVKLTKMLIEKSKLSILTEVFSEFERVYDELCGTEVVMVSSSKKMEEEELIGIAKNVQRLSGAIKVKYDLL

Homology

[Close]

BLAST of Cucsat.G1016 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-77
Identity = 161/230 (70.00%), Postives = 178/230 (77.39%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 78
           +G+AFVYFEDERDAEDAIR LDN PFGY++RRLSVEWA+GERGR R  +K+ +N +PTKT
Sbjct: 35  SGYAFVYFEDERDAEDAIRKLDNFPFGYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKT 94

Query: 79  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 138
           LFVINFDPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQFETQEDATKALE T  SKILD
Sbjct: 95  LFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILD 154

Query: 139 RVVSVEYALRDDGERGD-PFDESPRRAGG--YGRPGDSPYRRSPSPVFRRRPSPDYGRAH 198
           RVVSVEYAL+DD ER D     SPRR+    Y R     Y R PSP   RRPSPDYGRA 
Sbjct: 155 RVVSVEYALKDDDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRAR 214

Query: 199 SPAYDRYNGP--YERRRSPDYGRNRSPEYG-------GRFRSRSPIRRSR 237
           SP YDRY GP  YERRRSPDYGR RS +YG        R+RSRSP+ R R
Sbjct: 215 SPEYDRYKGPAAYERRRSPDYGR-RSSDYGRQRSPGYDRYRSRSPVPRGR 263

[Close]

BLAST of Cucsat.G1016 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-75
Identity = 159/230 (69.13%), Postives = 179/230 (77.83%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRP 78
           +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRP
Sbjct: 35  SGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRP 94

Query: 79  TKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSK 138
           TKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK
Sbjct: 95  TKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSK 154

Query: 139 ILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAH 198
           +LD+VVSVEYALR+ GER D +  S R             RRSPSPV+RRRPSPDY R  
Sbjct: 155 LLDKVVSVEYALREAGEREDRYAGSRR-------------RRSPSPVYRRRPSPDYTRRR 214

Query: 199 SPAYDRYNG--PYERRRSPDYGRNRSPEYG-------GRFRSRSPIRRSR 237
           SP YDRY G  PYERR+SPDYGR RS +YG       G  RSRSPI+R+R
Sbjct: 215 SPEYDRYKGPAPYERRKSPDYGR-RSSDYGRARARSPGYDRSRSPIQRAR 249

[Close]

BLAST of Cucsat.G1016 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 9.6e-55
Identity = 121/221 (54.75%), Postives = 146/221 (66.06%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRP 78
           AGFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP
Sbjct: 35  AGFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRP 94

Query: 79  TKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSK 138
           +KTLFVINFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK
Sbjct: 95  SKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSK 154

Query: 139 ILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAH 198
           ++D+V+SVEYA++DD  RG+ +    RR     R      RRSPSP  R R SPDYGR  
Sbjct: 155 LMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDR-----RRRSPSPYRRERGSPDYGRGA 214

Query: 199 SPAYDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSR 237
           SP   +       R SPDYGR R        RS SP +R+R
Sbjct: 215 SPVAHK-----RERTSPDYGRGR--------RSPSPYKRAR 237

[Close]

BLAST of Cucsat.G1016 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 212.6 bits (540), Expect = 4.8e-54
Identity = 134/232 (57.76%), Postives = 161/232 (69.40%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERG---RHRDGS-KSMANQR 78
           AGFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ R
Sbjct: 35  AGFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMR 94

Query: 79  PTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMS 138
           P+KTLFVINFD   TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ S
Sbjct: 95  PSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNS 154

Query: 139 KILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSP--YRRSPSPVFRRRPSPDYG 198
           K++D+V+SVEYA++DD  RG+    SP R     R   SP   RRSPSP  R R SPDYG
Sbjct: 155 KLMDKVISVEYAVKDDDARGN--GHSPER-----RRDRSPERRRRSPSPYKRERGSPDYG 214

Query: 199 RAHSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYG-GRFRSRSPIRRSR 237
           R  SP  AY  +R +  Y RRRSP  Y ++R  SPEYG  R  + SP RR R
Sbjct: 215 RGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGNDSPRRRER 259

[Close]

BLAST of Cucsat.G1016 vs. ExPASy Swiss-Prot
Match: Q5PPI1 (Serine/arginine-rich splicing factor 9 OS=Rattus norvegicus OX=10116 GN=Srsf9 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08
Identity = 53/171 (30.99%), Postives = 79/171 (46.20%), Query Frame = 0


Query: 12  MSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMA 71
           + N + L  FAFV FED RDAEDAI G +   +G  R R+    A G RG     S++  
Sbjct: 45  LKNRHGLVPFAFVRFEDPRDAEDAIYGRNGYDYGQCRLRVEFPRAYGGRGGWPRASRNGP 104

Query: 72  NQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALEC 131
             R +    +++  P     +D++ H    G V    ++++    V++  +ED   AL  
Sbjct: 105 PTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRK 164

Query: 132 THMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSP 182
              +K         Y +R   ERG  +  S  R+G  GR  DSPY+   SP
Sbjct: 165 LDDTKFRSHEGETSY-IRVYPERGTSYGCSRSRSGSRGR--DSPYQSRGSP 212

[Close]

BLAST of Cucsat.G1016 vs. NCBI nr
Match: XP_011650664.1 (serine/arginine-rich splicing factor RS31 isoform X2 [Cucumis sativus])

HSP 1 Score: 482 bits (1240), Expect = 1.05e-171
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MDDASTAYQFCMSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER 60
           MDDASTAYQFCMSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER
Sbjct: 1   MDDASTAYQFCMSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER 60

Query: 61  GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFET 120
           GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFET
Sbjct: 61  GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFET 120

Query: 121 QEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPS 180
           QEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPS
Sbjct: 121 QEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPS 180

Query: 181 PVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 237
           PVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT
Sbjct: 181 PVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 237

[Close]

BLAST of Cucsat.G1016 vs. NCBI nr
Match: XP_038893498.1 (serine/arginine-rich splicing factor RS31 isoform X2 [Benincasa hispida])

HSP 1 Score: 466 bits (1199), Expect = 1.87e-165
Identity = 234/238 (98.32%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MDDASTAYQFCMSNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER 60
           MDDASTAYQFC+SNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER
Sbjct: 1   MDDASTAYQFCISNCYYLAGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER 60

Query: 61  GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFET 120
           GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFET
Sbjct: 61  GRHRDGSKSMANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFET 120

Query: 121 QEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPS 180
           QEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAG YGRPGDSPYRRSPS
Sbjct: 121 QEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAG-YGRPGDSPYRRSPS 180

Query: 181 PVFRRRPSPDYGRAHSPAYDRYNGPYERRRSPDYGRNRSPEYGG-RFRSRSPIRRSRT 237
           PVFRRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEYGG RFRSRSPIRRSRT
Sbjct: 181 PVFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGGGRFRSRSPIRRSRT 237

[Close]

BLAST of Cucsat.G1016 vs. NCBI nr
Match: XP_011650665.1 (serine/arginine-rich splicing factor RS31 isoform X3 [Cucumis sativus] >XP_016899085.1 PREDICTED: serine/arginine-rich splicing factor RS31-like isoform X2 [Cucumis melo])

HSP 1 Score: 443 bits (1140), Expect = 1.66e-156
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 78
           AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 16  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 75

Query: 79  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 138
           LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD
Sbjct: 76  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 135

Query: 139 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 198
           RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA
Sbjct: 136 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 195

Query: 199 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 237
           YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT
Sbjct: 196 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 234

[Close]

BLAST of Cucsat.G1016 vs. NCBI nr
Match: XP_004133800.1 (serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus] >XP_008437857.1 PREDICTED: serine/arginine-rich splicing factor RS31-like isoform X1 [Cucumis melo] >KAA0048868.1 serine/arginine-rich splicing factor RS31 isoform X2 [Cucumis melo var. makuwa] >TYK20820.1 serine/arginine-rich splicing factor RS31 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 442 bits (1137), Expect = 9.46e-156
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 78
           +GFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 35  SGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 94

Query: 79  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 138
           LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD
Sbjct: 95  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 154

Query: 139 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 198
           RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA
Sbjct: 155 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 214

Query: 199 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 237
           YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT
Sbjct: 215 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 253

[Close]

BLAST of Cucsat.G1016 vs. NCBI nr
Match: XP_038893575.1 (serine/arginine-rich splicing factor RS31 isoform X3 [Benincasa hispida])

HSP 1 Score: 429 bits (1103), Expect = 7.24e-151
Identity = 217/220 (98.64%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 78
           AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 16  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 75

Query: 79  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 138
           LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD
Sbjct: 76  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 135

Query: 139 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 198
           RVVSVEYALRDDGERGDPFDESPRRAG YGRPGDSPYRRSPSPVFRRRPSPDYGRA SPA
Sbjct: 136 RVVSVEYALRDDGERGDPFDESPRRAG-YGRPGDSPYRRSPSPVFRRRPSPDYGRARSPA 195

Query: 199 YDRYNGPYERRRSPDYGRNRSPEYGG-RFRSRSPIRRSRT 237
           YDRYNGPYERRRSPDYGRNRSPEYGG RFRSRSPIRRSRT
Sbjct: 196 YDRYNGPYERRRSPDYGRNRSPEYGGGRFRSRSPIRRSRT 234

[Close]

BLAST of Cucsat.G1016 vs. ExPASy TrEMBL
Match: A0A1S4DTR0 (serine/arginine-rich splicing factor RS31-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483164 PE=4 SV=1)

HSP 1 Score: 443 bits (1140), Expect = 8.04e-157
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 78
           AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 16  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 75

Query: 79  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 138
           LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD
Sbjct: 76  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 135

Query: 139 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 198
           RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA
Sbjct: 136 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 195

Query: 199 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 237
           YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT
Sbjct: 196 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 234

[Close]

BLAST of Cucsat.G1016 vs. ExPASy TrEMBL
Match: A0A5D3DBI0 (Serine/arginine-rich splicing factor RS31 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00820 PE=4 SV=1)

HSP 1 Score: 442 bits (1137), Expect = 4.58e-156
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 78
           +GFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 35  SGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 94

Query: 79  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 138
           LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD
Sbjct: 95  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 154

Query: 139 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 198
           RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA
Sbjct: 155 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 214

Query: 199 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 237
           YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT
Sbjct: 215 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 253

[Close]

BLAST of Cucsat.G1016 vs. ExPASy TrEMBL
Match: A0A0A0L8H4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119350 PE=4 SV=1)

HSP 1 Score: 442 bits (1137), Expect = 4.58e-156
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 78
           +GFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 35  SGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 94

Query: 79  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 138
           LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD
Sbjct: 95  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 154

Query: 139 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 198
           RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA
Sbjct: 155 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 214

Query: 199 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 237
           YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT
Sbjct: 215 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 253

[Close]

BLAST of Cucsat.G1016 vs. ExPASy TrEMBL
Match: A0A1S3AUZ7 (serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483164 PE=4 SV=1)

HSP 1 Score: 442 bits (1137), Expect = 4.58e-156
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 78
           +GFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 35  SGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 94

Query: 79  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 138
           LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD
Sbjct: 95  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 154

Query: 139 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 198
           RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA
Sbjct: 155 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 214

Query: 199 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 237
           YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT
Sbjct: 215 YDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 253

[Close]

BLAST of Cucsat.G1016 vs. ExPASy TrEMBL
Match: A0A6J1D289 (serine/arginine-rich splicing factor RS31-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016334 PE=4 SV=1)

HSP 1 Score: 413 bits (1061), Expect = 8.52e-145
Identity = 211/220 (95.91%), Postives = 213/220 (96.82%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 78
           AGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKT
Sbjct: 16  AGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKT 75

Query: 79  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 138
           LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD
Sbjct: 76  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 135

Query: 139 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDS-PYRRSPSPVFRRRPSPDYGRAHSP 198
           RVVSVEYALRDDGERGDPFDESPRRA  YGRPGDS PYRRSPSP FRRRPSPDYGRA SP
Sbjct: 136 RVVSVEYALRDDGERGDPFDESPRRAA-YGRPGDSSPYRRSPSPAFRRRPSPDYGRARSP 195

Query: 199 AYDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSRT 237
           AYDRYNGPYERRRSPDYGRNRSPEYG RFRSRSPIRRSRT
Sbjct: 196 AYDRYNGPYERRRSPDYGRNRSPEYG-RFRSRSPIRRSRT 233

[Close]

BLAST of Cucsat.G1016 vs. TAIR 10
Match: AT3G61860.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-78
Identity = 161/230 (70.00%), Postives = 178/230 (77.39%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 78
           +G+AFVYFEDERDAEDAIR LDN PFGY++RRLSVEWA+GERGR R  +K+ +N +PTKT
Sbjct: 35  SGYAFVYFEDERDAEDAIRKLDNFPFGYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKT 94

Query: 79  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 138
           LFVINFDPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQFETQEDATKALE T  SKILD
Sbjct: 95  LFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILD 154

Query: 139 RVVSVEYALRDDGERGD-PFDESPRRAGG--YGRPGDSPYRRSPSPVFRRRPSPDYGRAH 198
           RVVSVEYAL+DD ER D     SPRR+    Y R     Y R PSP   RRPSPDYGRA 
Sbjct: 155 RVVSVEYALKDDDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRAR 214

Query: 199 SPAYDRYNGP--YERRRSPDYGRNRSPEYG-------GRFRSRSPIRRSR 237
           SP YDRY GP  YERRRSPDYGR RS +YG        R+RSRSP+ R R
Sbjct: 215 SPEYDRYKGPAAYERRRSPDYGR-RSSDYGRQRSPGYDRYRSRSPVPRGR 263

[Close]

BLAST of Cucsat.G1016 vs. TAIR 10
Match: AT2G46610.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 285.4 bits (729), Expect = 4.1e-77
Identity = 160/230 (69.57%), Postives = 179/230 (77.83%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRP 78
           AG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRP
Sbjct: 9   AGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRP 68

Query: 79  TKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSK 138
           TKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK
Sbjct: 69  TKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSK 128

Query: 139 ILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAH 198
           +LD+VVSVEYALR+ GER D +  S R             RRSPSPV+RRRPSPDY R  
Sbjct: 129 LLDKVVSVEYALREAGEREDRYAGSRR-------------RRSPSPVYRRRPSPDYTRRR 188

Query: 199 SPAYDRYNG--PYERRRSPDYGRNRSPEYG-------GRFRSRSPIRRSR 237
           SP YDRY G  PYERR+SPDYGR RS +YG       G  RSRSPI+R+R
Sbjct: 189 SPEYDRYKGPAPYERRKSPDYGR-RSSDYGRARARSPGYDRSRSPIQRAR 223

[Close]

BLAST of Cucsat.G1016 vs. TAIR 10
Match: AT2G46610.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 284.3 bits (726), Expect = 9.2e-77
Identity = 159/230 (69.13%), Postives = 179/230 (77.83%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWAR---GERGRHRDGSKSMANQRP 78
           +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRP
Sbjct: 35  SGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPRDG-KAVSNQRP 94

Query: 79  TKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSK 138
           TKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK
Sbjct: 95  TKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSK 154

Query: 139 ILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAH 198
           +LD+VVSVEYALR+ GER D +  S R             RRSPSPV+RRRPSPDY R  
Sbjct: 155 LLDKVVSVEYALREAGEREDRYAGSRR-------------RRSPSPVYRRRPSPDYTRRR 214

Query: 199 SPAYDRYNG--PYERRRSPDYGRNRSPEYG-------GRFRSRSPIRRSR 237
           SP YDRY G  PYERR+SPDYGR RS +YG       G  RSRSPI+R+R
Sbjct: 215 SPEYDRYKGPAPYERRKSPDYGR-RSSDYGRARARSPGYDRSRSPIQRAR 249

[Close]

BLAST of Cucsat.G1016 vs. TAIR 10
Match: AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 214.9 bits (546), Expect = 6.9e-56
Identity = 121/221 (54.75%), Postives = 146/221 (66.06%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRP 78
           AGFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP
Sbjct: 35  AGFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRP 94

Query: 79  TKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSK 138
           +KTLFVINFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK
Sbjct: 95  SKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSK 154

Query: 139 ILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAH 198
           ++D+V+SVEYA++DD  RG+ +    RR     R      RRSPSP  R R SPDYGR  
Sbjct: 155 LMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDR-----RRRSPSPYRRERGSPDYGRGA 214

Query: 199 SPAYDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSR 237
           SP   +       R SPDYGR R        RS SP +R+R
Sbjct: 215 SPVAHK-----RERTSPDYGRGR--------RSPSPYKRAR 237

[Close]

BLAST of Cucsat.G1016 vs. TAIR 10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 214.9 bits (546), Expect = 6.9e-56
Identity = 121/221 (54.75%), Postives = 146/221 (66.06%), Query Frame = 0


Query: 19  AGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGER---GRHRDGSKSMANQRP 78
           AGFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP
Sbjct: 35  AGFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRP 94

Query: 79  TKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSK 138
           +KTLFVINFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK
Sbjct: 95  SKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSK 154

Query: 139 ILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAH 198
           ++D+V+SVEYA++DD  RG+ +    RR     R      RRSPSP  R R SPDYGR  
Sbjct: 155 LMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDR-----RRRSPSPYRRERGSPDYGRGA 214

Query: 199 SPAYDRYNGPYERRRSPDYGRNRSPEYGGRFRSRSPIRRSR 237
           SP   +       R SPDYGR R        RS SP +R+R
Sbjct: 215 SPVAHK-----RERTSPDYGRGR--------RSPSPYKRAR 237

The following BLAST results are available for this feature:

BLAST of Cucsat.G1016 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92964	1.8e-77	70.00	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
Q9ZPX8	1.3e-75	69.13	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
P92966	9.6e-55	54.75	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92965	4.8e-54	57.76	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
Q5PPI1	1.4e-08	30.99	Serine/arginine-rich splicing factor 9 OS=Rattus norvegicus OX=10116 GN=Srsf9 PE...	[more]

BLAST of Cucsat.G1016 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650664.1	1.05e-171	100.00	serine/arginine-rich splicing factor RS31 isoform X2 [Cucumis sativus]	[more]
XP_038893498.1	1.87e-165	98.32	serine/arginine-rich splicing factor RS31 isoform X2 [Benincasa hispida]	[more]
XP_011650665.1	1.66e-156	100.00	serine/arginine-rich splicing factor RS31 isoform X3 [Cucumis sativus] >XP_01689...	[more]
XP_004133800.1	9.46e-156	99.54	serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus] >XP_00843...	[more]
XP_038893575.1	7.24e-151	98.64	serine/arginine-rich splicing factor RS31 isoform X3 [Benincasa hispida]	[more]

BLAST of Cucsat.G1016 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DTR0	8.04e-157	100.00	serine/arginine-rich splicing factor RS31-like isoform X2 OS=Cucumis melo OX=365...	[more]
A0A5D3DBI0	4.58e-156	99.54	Serine/arginine-rich splicing factor RS31 isoform X2 OS=Cucumis melo var. makuwa...	[more]
A0A0A0L8H4	4.58e-156	99.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119350 PE=4 SV=1	[more]
A0A1S3AUZ7	4.58e-156	99.54	serine/arginine-rich splicing factor RS31-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A6J1D289	8.52e-145	95.91	serine/arginine-rich splicing factor RS31-like isoform X2 OS=Momordica charantia...	[more]

BLAST of Cucsat.G1016 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61860.1	1.3e-78	70.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G46610.2	4.1e-77	69.57	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G46610.1	9.2e-77	69.13	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.1	6.9e-56	54.75	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.2	6.9e-56	54.75	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 75..141 e-value: 3.3E-17 score: 73.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 76..138 e-value: 2.9E-12 score: 46.2 coord: 16..40 e-value: 9.2E-5 score: 22.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 74..145 score: 15.220978
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 1..55 score: 9.302753
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 12..68 e-value: 1.2E-9 score: 40.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 69..152 e-value: 3.6E-19 score: 70.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..216
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 7..186
None	No IPR available	CDD	cd12466	RRM2_AtRSp31_like	coord: 75..144 e-value: 2.37155E-42 score: 136.524
IPR029537	Arginine/serine-rich-splicing factor RSP31/31A	PANTHER	PTHR23147:SF146	SERINE/ARGININE-RICH SPLICING FACTOR RS31-RELATED	coord: 7..186
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 15..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G1016.T18	Cucsat.G1016.T18	mRNA
Cucsat.G1016.T7	Cucsat.G1016.T7	mRNA
Cucsat.G1016.T2	Cucsat.G1016.T2	mRNA
Cucsat.G1016.T4	Cucsat.G1016.T4	mRNA
Cucsat.G1016.T1	Cucsat.G1016.T1	mRNA
Cucsat.G1016.T9	Cucsat.G1016.T9	mRNA
Cucsat.G1016.T8	Cucsat.G1016.T8	mRNA
Cucsat.G1016.T6	Cucsat.G1016.T6	mRNA
Cucsat.G1016.T5	Cucsat.G1016.T5	mRNA
Cucsat.G1016.T3	Cucsat.G1016.T3	mRNA
Cucsat.G1016.T15	Cucsat.G1016.T15	mRNA
Cucsat.G1016.T13	Cucsat.G1016.T13	mRNA
Cucsat.G1016.T14	Cucsat.G1016.T14	mRNA
Cucsat.G1016.T10	Cucsat.G1016.T10	mRNA
Cucsat.G1016.T11	Cucsat.G1016.T11	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0016020	membrane
cellular_component	GO:0016607	nuclear speck
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding