Cucsat.G10134 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTCAATCTTTCTTTTTTCTTTTGTTTAATTTTGAACTCTCCAATGGCGGCTTCTTCTTCTTCTTCTTATTCCCTTTACTTTTTGTTGCTTCTTTTATCTCTTTCTTTCTTCTTGTCTATGACTGCTCCACTACCTTCCAATTCCTCCTTACCTTTTGTTCATCAACATCCTCATCTCGTCGTTGAAGAAGTTCAAAGGTATATATATACATTTTTGTTATGTACATTGGTTCTCATACATATTAAATATACTCTTGTTTTAGTTCTTGTACTTCTAAATCATTTAACTTTCGGTCATGCATGCATTTTTAAAAACAAATCTTTTATGTAACAAAGTTTTAGGGTTAAACTTGGCTCACTTGTGAAAATAAATTTATATGGGAAGAGCAGTTGTTATGATGAGTAAAATTTTAATTTGTGTTATTATTTTGTAGATCCAATTAAAATAAACCTTTTTTTAAAAGAATAAAACATGACAAGTAGACACCTTAAAAGGTGGGAATGTAATGTGACAAAGGAACAAACATTGAAAGTTTACTATTTTAAAGAATGAGCACCTAGCTAACATAGAACCAAACCTAAACTGTATTCAAAATTTTGGGGAAAATACTTCTTAGTGTATCTATGTTTTGATATACATTTGGTAATTGTATTAGTTATTATTTCTGGTTGTAAAATAAATTTGTGGTTACTGATGGCGGCACGCAGGAGCATAAATGGATCAAGAAGAAACTTGGGGTATTTATCATGTGGAACAGGAAACCCAATAGACGATTGTTGGAGATGCGATTCCAATTGGGAAACAAACCGTAAACGCTTAGCCGATTGCGCCATCGGCTTCGGCAAAAACGCAATCGGCGGCAAAAACGGCCGTTTCTACGTAGTCACTGACTCCGGGAACGACGACCCA TTCAATCTTTCTTTTTTCTTTTGTTTAATTTTGAACTCTCCAATGGCGGCTTCTTCTTCTTCTTCTTATTCCCTTTACTTTTTGTTGCTTCTTTTATCTCTTTCTTTCTTCTTGTCTATGACTGCTCCACTACCTTCCAATTCCTCCTTACCTTTTGTTCATCAACATCCTCATCTCGTCGTTGAAGAAGTTCAAAGGAGCATAAATGGATCAAGAAGAAACTTGGGGTATTTATCATGTGGAACAGGAAACCCAATAGACGATTGTTGGAGATGCGATTCCAATTGGGAAACAAACCGTAAACGCTTAGCCGATTGCGCCATCGGCTTCGGCAAAAACGCAATCGGCGGCAAAAACGGCCGTTTCTACGTAGTCACTGACTCCGGGAACGACGACCCA FNLSFFFCLILNSPMAASSSSSYSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDP Homology
BLAST of Cucsat.G10134 vs. ExPASy Swiss-Prot
Match: O24554 (Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 4.8e-35 Identity = 70/103 (67.96%), Postives = 79/103 (76.70%), Query Frame = 0
BLAST of Cucsat.G10134 vs. ExPASy Swiss-Prot
Match: Q9LTZ0 (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2) HSP 1 Score: 142.5 bits (358), Expect = 3.4e-33 Identity = 74/117 (63.25%), Postives = 88/117 (75.21%), Query Frame = 0
BLAST of Cucsat.G10134 vs. ExPASy Swiss-Prot
Match: Q9C5M8 (Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2) HSP 1 Score: 134.0 bits (336), Expect = 1.2e-30 Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Cucsat.G10134 vs. ExPASy Swiss-Prot
Match: Q93Z25 (Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.1e-30 Identity = 69/116 (59.48%), Postives = 80/116 (68.97%), Query Frame = 0
BLAST of Cucsat.G10134 vs. ExPASy Swiss-Prot
Match: Q9FXD8 (Probable pectate lyase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g67750 PE=2 SV=2) HSP 1 Score: 130.6 bits (327), Expect = 1.3e-29 Identity = 64/104 (61.54%), Postives = 73/104 (70.19%), Query Frame = 0
BLAST of Cucsat.G10134 vs. NCBI nr
Match: XP_004142773.1 (pectate lyase [Cucumis sativus] >KGN51335.1 hypothetical protein Csa_008191 [Cucumis sativus]) HSP 1 Score: 240 bits (612), Expect = 1.68e-75 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of Cucsat.G10134 vs. NCBI nr
Match: XP_008458848.1 (PREDICTED: pectate lyase-like [Cucumis melo]) HSP 1 Score: 218 bits (555), Expect = 6.11e-67 Identity = 110/120 (91.67%), Postives = 113/120 (94.17%), Query Frame = 0
BLAST of Cucsat.G10134 vs. NCBI nr
Match: KAA0037617.1 (pectate lyase-like [Cucumis melo var. makuwa] >TYK09359.1 pectate lyase-like [Cucumis melo var. makuwa]) HSP 1 Score: 197 bits (501), Expect = 4.29e-59 Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Cucsat.G10134 vs. NCBI nr
Match: XP_038890725.1 (pectate lyase-like [Benincasa hispida]) HSP 1 Score: 190 bits (482), Expect = 5.00e-56 Identity = 97/120 (80.83%), Postives = 104/120 (86.67%), Query Frame = 0
BLAST of Cucsat.G10134 vs. NCBI nr
Match: XP_022959813.1 (pectate lyase-like [Cucurbita moschata]) HSP 1 Score: 164 bits (416), Expect = 7.64e-46 Identity = 90/123 (73.17%), Postives = 97/123 (78.86%), Query Frame = 0
BLAST of Cucsat.G10134 vs. ExPASy TrEMBL
Match: A0A0A0KNX3 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_5G517820 PE=3 SV=1) HSP 1 Score: 240 bits (612), Expect = 8.13e-76 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of Cucsat.G10134 vs. ExPASy TrEMBL
Match: A0A1S3C8C5 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103498129 PE=3 SV=1) HSP 1 Score: 218 bits (555), Expect = 2.96e-67 Identity = 110/120 (91.67%), Postives = 113/120 (94.17%), Query Frame = 0
BLAST of Cucsat.G10134 vs. ExPASy TrEMBL
Match: A0A5D3CGC7 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00560 PE=3 SV=1) HSP 1 Score: 197 bits (501), Expect = 2.08e-59 Identity = 89/93 (95.70%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Cucsat.G10134 vs. ExPASy TrEMBL
Match: A0A6J1H707 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111460762 PE=3 SV=1) HSP 1 Score: 164 bits (416), Expect = 3.70e-46 Identity = 90/123 (73.17%), Postives = 97/123 (78.86%), Query Frame = 0
BLAST of Cucsat.G10134 vs. ExPASy TrEMBL
Match: A0A6J1JPY5 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111487839 PE=3 SV=1) HSP 1 Score: 163 bits (412), Expect = 7.43e-46 Identity = 88/124 (70.97%), Postives = 98/124 (79.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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