|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGATTATCCAACCCTCTGAAATTCCAACGCCATCATTGCCACAACCCAGAACGTACGGAGCTTTTTCCAACTGTTTCCCTTCTGGGCTCCATACTTTCCTTAGCTTCCAATTCAATTCTCCCGTGTTTCCCCCTTTCCCCTGCGAATTGGGTCGTTCAGAATATTGTAATCAGAGCTCTGTTTCGATTGGTCTCGTGGGGATTTTGAAAGGTATGTGAGGTTCCTTGTTTTAGCTTTATGCGTATTGGGTTTAATGTAATTTAGGTATTCGAAATGAAACCAAACTGTTTGAACTTGTTTGTTTCTGGGGGTTGAGATTTTGAATTTGTGTTGTTTGGTGATTATGGAAAGTCAACTTGTAGACCTAATTTTGCAGGTATGGACCAGAATTGCACGTAA mRNA sequence ATGATTATCCAACCCTCTGAAATTCCAACGCCATCATTGCCACAACCCAGAACGTACGGAGCTTTTTCCAACTGTTTCCCTTCTGGGCTCCATACTTTCCTTAGCTTCCAATTCAATTCTCCCGTGTTTCCCCCTTTCCCCTGCGAATTGGGTCGTTCAGAATATTGTAATCAGAGCTCTGTTTCGATTGGTCTCGTGGGGATTTTGAAAGGTATGGACCAGAATTGCACGTAA Coding sequence (CDS) ATGATTATCCAACCCTCTGAAATTCCAACGCCATCATTGCCACAACCCAGAACGTACGGAGCTTTTTCCAACTGTTTCCCTTCTGGGCTCCATACTTTCCTTAGCTTCCAATTCAATTCTCCCGTGTTTCCCCCTTTCCCCTGCGAATTGGGTCGTTCAGAATATTGTAATCAGAGCTCTGTTTCGATTGGTCTCGTGGGGATTTTGAAAGGTATGGACCAGAATTGCACGTAA Protein sequence MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSSVSIGLVGILKGMDQNCT
Homology
BLAST of Csor.00g305370 vs. NCBI nr
Match: KAG6574219.1 (hypothetical protein SDJN03_28106, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164 bits (416), Expect = 2.99e-51 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 Query: 1 MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSS 60 MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSS Sbjct: 1 MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSS 60
Query: 61 VSIGLVGILKGMDQNCT 77 VSIGLVGILKGMDQNCT Sbjct: 61 VSIGLVGILKGMDQNCT 77
BLAST of Csor.00g305370 vs. NCBI nr
Match: KAG7013288.1 (putative inactive receptor kinase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145 bits (367), Expect = 1.24e-38 Identity = 68/72 (94.44%), Postives = 70/72 (97.22%), Query Frame = 0 Query: 1 MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSS 60 MII+PSEIPTPSLPQPRTYGAFSNCFPSG HTFLSFQFNSPVFPPFPCELGRSEYCNQSS Sbjct: 1 MIIRPSEIPTPSLPQPRTYGAFSNCFPSGFHTFLSFQFNSPVFPPFPCELGRSEYCNQSS 60
Query: 61 VSIGLVGILKGM 72 VSIGLVGILK + Sbjct: 61 VSIGLVGILKAI 72
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6574219.1 | 2.99e-51 | 100.00 | hypothetical protein SDJN03_28106, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7013288.1 | 1.24e-38 | 94.44 | putative inactive receptor kinase [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
|