Csor.00g302380 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAAGCTTAAACACAGCCTCTTCAATGGCTTCCACACTCTTCATCTCTCATCCTTCTCTCACTCTTCTCTCTATCTTGTCCGACAATGGCTTCGTCTCCATGGCCGTGATGCTCCAGCTCATAGCCCAATCCTTGCTCTCTCAATCCAATTCAATCACAATCTTCTCACCTTCAGATACTGCTTTCGCCCAATCCGGTCAGCCTTCTCTCTCTCTCTCTTCTTCGATTCCATTTCTTGCCTCTCTACTTATCTCCCGAATGCCTCAAATCGCTCGCGTTGGGGCACCAAGATTTCCACGATGTTGGCCGATCGATCGCTCACGGTAACCTCTTCCCGATATTTTCATGAAATTTCTTTGAATCGAGTCATGATCAGTAGCTCGCCGATTTACGATGACGTTCGCTCCTTGTTTTTGGCACCGATAAGTTTTTTGACCTGA ATGCCGAAGCTTAAACACAGCCTCTTCAATGGCTTCCACACTCTTCATCTCTCATCCTTCTCTCACTCTTCTCTCTATCTTGTCCGACAATGGCTTCGTCTCCATGGCCGTGATGCTCCAGCTCATAGCCCAATCCTTGCTCTCTCAATCCAATTCAATCACAATCTTCTCACCTTCAGATACTGCTTTCGCCCAATCCGGTCAGCCTTCTCTCTCTCTCTCTTCTTCGATTCCATTTCTTGCCTCTCTACTTATCTCCCGAATGCCTCAAATCGCTCGCGTTGGGGCACCAAGATTTCCACGATGTTGGCCGATCGATCGCTCACGGTAACCTCTTCCCGATATTTTCATGAAATTTCTTTGAATCGAGTCATGATCAGTAGCTCGCCGATTTACGATGACGTTCGCTCCTTGTTTTTGGCACCGATAAGTTTTTTGACCTGA ATGCCGAAGCTTAAACACAGCCTCTTCAATGGCTTCCACACTCTTCATCTCTCATCCTTCTCTCACTCTTCTCTCTATCTTGTCCGACAATGGCTTCGTCTCCATGGCCGTGATGCTCCAGCTCATAGCCCAATCCTTGCTCTCTCAATCCAATTCAATCACAATCTTCTCACCTTCAGATACTGCTTTCGCCCAATCCGGTCAGCCTTCTCTCTCTCTCTCTTCTTCGATTCCATTTCTTGCCTCTCTACTTATCTCCCGAATGCCTCAAATCGCTCGCGTTGGGGCACCAAGATTTCCACGATGTTGGCCGATCGATCGCTCACGGTAACCTCTTCCCGATATTTTCATGAAATTTCTTTGAATCGAGTCATGATCAGTAGCTCGCCGATTTACGATGACGTTCGCTCCTTGTTTTTGGCACCGATAAGTTTTTTGACCTGA MPKLKHSLFNGFHTLHLSSFSHSSLYLVRQWLRLHGRDAPAHSPILALSIQFNHNLLTFRYCFRPIRSAFSLSLFFDSISCLSTYLPNASNRSRWGTKISTMLADRSLTVTSSRYFHEISLNRVMISSSPIYDDVRSLFLAPISFLT Homology
BLAST of Csor.00g302380 vs. NCBI nr
Match: KAG6573921.1 (hypothetical protein SDJN03_27808, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 293 bits (750), Expect = 5.73e-100 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Csor.00g302380 vs. NCBI nr
Match: XP_022945764.1 (LOW QUALITY PROTEIN: putative fasciclin-like arabinogalactan protein 20 [Cucurbita moschata]) HSP 1 Score: 146 bits (368), Expect = 2.19e-40 Identity = 83/108 (76.85%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of Csor.00g302380 vs. NCBI nr
Match: XP_022967990.1 (LOW QUALITY PROTEIN: putative fasciclin-like arabinogalactan protein 20, partial [Cucurbita maxima]) HSP 1 Score: 75.5 bits (184), Expect = 2.64e-13 Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0
BLAST of Csor.00g302380 vs. NCBI nr
Match: KAG7032046.1 (putative fasciclin-like arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 53.5 bits (127), Expect = 4.80e-05 Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
BLAST of Csor.00g302380 vs. NCBI nr
Match: XP_022983481.1 (putative fasciclin-like arabinogalactan protein 20 [Cucurbita maxima]) HSP 1 Score: 53.5 bits (127), Expect = 4.80e-05 Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
BLAST of Csor.00g302380 vs. ExPASy TrEMBL
Match: A0A6J1G1W2 (LOW QUALITY PROTEIN: putative fasciclin-like arabinogalactan protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111449908 PE=4 SV=1) HSP 1 Score: 146 bits (368), Expect = 1.06e-40 Identity = 83/108 (76.85%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of Csor.00g302380 vs. ExPASy TrEMBL
Match: A0A6J1HVX4 (LOW QUALITY PROTEIN: putative fasciclin-like arabinogalactan protein 20 OS=Cucurbita maxima OX=3661 GN=LOC111467360 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.28e-13 Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0
BLAST of Csor.00g302380 vs. ExPASy TrEMBL
Match: A0A6J1J2F0 (putative fasciclin-like arabinogalactan protein 20 OS=Cucurbita maxima OX=3661 GN=LOC111482042 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.32e-05 Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
BLAST of Csor.00g302380 vs. ExPASy TrEMBL
Match: A0A6J1H1S8 (putative fasciclin-like arabinogalactan protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111458798 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.32e-05 Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
BLAST of Csor.00g302380 vs. ExPASy TrEMBL
Match: A0A6J1DAK1 (putative fasciclin-like arabinogalactan protein 20 OS=Momordica charantia OX=3673 GN=LOC111018700 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.11e-05 Identity = 48/98 (48.98%), Postives = 55/98 (56.12%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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