Csor.00g301970 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g301970
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	copper transport protein ATX1-like
Location	Csor_Chr18: 10932688 .. 10934406 (-)
RNA-Seq Expression	Csor.00g301970
Synteny	Csor.00g301970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCAGGTACCGCTACGAATTTCTCGGAAATTTGTTCTTGAATGTAATTGTTGGAGATTCGCTTCACGTTTTTCGGCCTCGTTTTTTTTTTTCTTTTTCTCTTTCTGTCTCCCGTATGTTTTGGAGATCGAAGATACGTTGGTTTGTTCTTTTTAAACTATAAATCTGCTGTTTGGAGCATGAATCGTTGATTAAAATTGGCGTAGAAGGACTTGTGGATTTGTTTTGAAACATATTCAATCTATGGCGTATCAGATCTTTATATGCTATAAGAAATTATGTAAGCTACAGAGATGCAAGAGCTACTCACGCGATTGTTGATATCTTGTATAGTTCCTACTTATTTTGCGATTCAGACCTGCACATAGTTCAATTCTTTTAGCATTTTGTCCTTTTTCCTTGCTTCTTCTTCCTAAGGTCTTATGCCGTGGTTTTTCATTTGATGTGAATCTGACACCAGTGGTGGAAACGTCAGTAACCGAGCCAAATGAGGTCGAAGTCTAAGAGAGCTCCATAGAAGTATTTCTTTAGTATCGCTAATTGATCAACTTATTGGTTAATAATTGGTCAATCGATCACAAAGGAAGCTTTATCTTGATCGTATATTAGATTCTGGTCACAAAGGAATTTTTTCCCGCTCTTCCAAATTAGAATGTTCTGCTCTTTTTTGTGTTTTGAATTATTAATCTATGTTATTTTGGGAGCCAGAGTTGTTGAAAAATCACTGAGAATATTTATTGATATCACTGATAAAATTGGATTAGTAAGTTTCTGCGAAGAATTTGATAAAGGACCGTTGATATTAAGCACTCTTGAACAAGTTAAATTCTTGTGTGAGATGAACTAACTCTTATTTCTTGGTATCAGGCAGTCTGTATTGCACCTTCCTCTTCTAGCTGAGTTCTATGATTCTATCTTTAATAAATACAGTTTGGAATTTGTTTCTGTGCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAGACGTGTCTTGGGAAAACTGGAAGGTTTGTCATTCCTTGGCTAAATTTTGGTTGTCTCATGATGTGCTCTTCTTTGATGTGTAATCTTTGTATCGGTTCGTGGGGTCGAGTTTTGGTTTAGACATATATCTTGGACAAAGAGGTCAGAAGTTTGAACTTCACAAAGTTCTAGACTAATACACGAACTCTTGAAAGTGTAAACCATATGCATGCTTGGTTAATTTCATTGCAAGCTTAGTTCTCTTTTATGTTTTAAGATTTTTAGAATGAATTCTTGAGTGATGGTTAATAAATCAATCATTATTGCAAAATCGAGTATCCTTCAATCTAAACCCTTAGATTCTTGCTATTCCCAACTGAATATGAACGTTTTGAACTTTACTTAAGTGCTTGGCTACCATGTTCAGGAGTCGAGACATTTGACATCGACATTGATGCGCAAAAGGTGACTGTGAAAGGCAACGTGGAGCGCGATGTAGTTTTCCAAACTGTTTCCAAAACCGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAACAGCAGCACCAGCACCGGCGGCAGCCGCAGCAGCTGCCCCCGCACCGGCGGCAGCCCCAGCAGCTGCCCCCGCACCGGAGGCGGCCCCAGCAACGGCACCTGCATCAGAGGCGGCCCCAGCAGCACCAGCTGAAGCAGAAGCTAAACCAGCCGAGACTGCGGCTGCTGTTTAA

mRNA sequence

ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAGACGTGTCTTGGGAAAACTGGAAGGAGTCGAGACATTTGACATCGACATTGATGCGCAAAAGGTGACTGTGAAAGGCAACGTGGAGCGCGATGTAGTTTTCCAAACTGTTTCCAAAACCGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAACAGCAGCACCAGCACCGGCGGCAGCCGCAGCAGCTGCCCCCGCACCGGCGGCAGCCCCAGCAGCTGCCCCCGCACCGGAGGCGGCCCCAGCAACGGCACCTGCATCAGAGGCGGCCCCAGCAGCACCAGCTGAAGCAGAAGCTAAACCAGCCGAGACTGCGGCTGCTGTTTAA

Coding sequence (CDS)

ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAGACGTGTCTTGGGAAAACTGGAAGGAGTCGAGACATTTGACATCGACATTGATGCGCAAAAGGTGACTGTGAAAGGCAACGTGGAGCGCGATGTAGTTTTCCAAACTGTTTCCAAAACCGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAACAGCAGCACCAGCACCGGCGGCAGCCGCAGCAGCTGCCCCCGCACCGGCGGCAGCCCCAGCAGCTGCCCCCGCACCGGAGGCGGCCCCAGCAACGGCACCTGCATCAGAGGCGGCCCCAGCAGCACCAGCTGAAGCAGAAGCTAAACCAGCCGAGACTGCGGCTGCTGTTTAA

Protein sequence

MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAAPAEAEAKPAETAAAV

Homology

[Close]

BLAST of Csor.00g301970 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-24
Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQT VL+VAM+C+GCVGAV+RVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KT
Sbjct: 1  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 60

Query: 61 GKKTAYWEDEAPTA 75
          GKKTA+WE E  TA
Sbjct: 61 GKKTAFWEAEGETA 74

[Close]

BLAST of Csor.00g301970 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-16
Identity = 69/124 (55.65%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNVE + VFQTVSKT
Sbjct: 1   MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAAPAEAEA 120
           GKKT+YW    P  A A   A A             A     A   A        AEAE 
Sbjct: 61  GKKTSYW----PVEAEAEPKAEADPKVETVTETKTEAETKTEAKVDAKADVEPKAAEAET 120

Query: 121 KPAE 125
           KP++
Sbjct: 121 KPSQ 120

[Close]

BLAST of Csor.00g301970 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 7  LKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAY 66
          L V M C+GC   VRR + KL+GV+T +ID+D QKVTV G V+R+ V + V +TG+   Y
Sbjct: 20 LLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEY 79

Query: 67 W 68
          W
Sbjct: 80 W 80

[Close]

BLAST of Csor.00g301970 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.4e-09
Identity = 26/64 (40.62%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 4  TTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKK 63
          T VL+V++ C+GC   ++++L K++GV T +ID+  QKVTV GNVE +++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

[Close]

BLAST of Csor.00g301970 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 3  QTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGK 62
          QT VLKV + C GC   V+++L K+EGV T  ID +  KVTV GNV+  V+ + + K+GK
Sbjct: 10 QTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGK 69

Query: 63 KTAYW 68
              W
Sbjct: 70 HAEIW 74

[Close]

BLAST of Csor.00g301970 vs. NCBI nr
Match: KAG6573880.1 (Copper transport protein ATX1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210 bits (535), Expect = 9.16e-68
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAAPAEAEA 120
           GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAAPAEAEA
Sbjct: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAAPAEAEA 120

Query: 121 KPAETAAAV 129
           KPAETAAAV
Sbjct: 121 KPAETAAAV 129

[Close]

BLAST of Csor.00g301970 vs. NCBI nr
Match: XP_022945074.1 (copper transport protein ATX1-like [Cucurbita moschata])

HSP 1 Score: 198 bits (504), Expect = 5.36e-63
Identity = 125/132 (94.70%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAA---PAE 120
           GKKTAYWEDEAP  APAPAAAAAAAPAPAAAPAA+PAPEAAPA APASEAAPAA   PAE
Sbjct: 61  GKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEAAPAAAPASEAAPAAAAAPAE 120

Query: 121 AEAKPAETAAAV 129
           AEAKPAETAAAV
Sbjct: 121 AEAKPAETAAAV 132

[Close]

BLAST of Csor.00g301970 vs. NCBI nr
Match: XP_023541206.1 (copper transport protein ATX1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192 bits (487), Expect = 2.09e-60
Identity = 122/132 (92.42%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAA---PAE 120
           GKKTAYWEDEAP AAPAP AAAAAAPAPAAAPAAAPAP AAPA APA EAAPAA   PAE
Sbjct: 61  GKKTAYWEDEAPAAAPAPVAAAAAAPAPAAAPAAAPAPVAAPAAAPAPEAAPAAAAPPAE 120

Query: 121 AEAKPAETAAAV 129
           AEAKPAE+ AAV
Sbjct: 121 AEAKPAESVAAV 132

[Close]

BLAST of Csor.00g301970 vs. NCBI nr
Match: XP_022968569.1 (copper transport protein ATX1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 178 bits (451), Expect = 5.25e-55
Identity = 116/131 (88.55%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVRRVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAA--PAEA 120
           GKKTAYWEDEAP AA     AAAAAPAPAAAPAAAPAP AAPA APA EAAPAA  PAEA
Sbjct: 61  GKKTAYWEDEAPAAA-----AAAAAPAPAAAPAAAPAPVAAPAAAPAPEAAPAAAPPAEA 120

Query: 121 EAKPAETAAAV 129
           EAKPAE+ AAV
Sbjct: 121 EAKPAESVAAV 126

[Close]

BLAST of Csor.00g301970 vs. NCBI nr
Match: XP_022968570.1 (copper transport protein ATX1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 165 bits (418), Expect = 3.48e-50
Identity = 104/129 (80.62%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVRRVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAAPAEAEA 120
           GKKTAYWEDEAP AAPAP AA          PAAAPAPEAAPA AP        PAEAEA
Sbjct: 61  GKKTAYWEDEAPAAAPAPVAA----------PAAAPAPEAAPAAAP--------PAEAEA 111

Query: 121 KPAETAAAV 129
           KPAE+ AAV
Sbjct: 121 KPAESVAAV 111

[Close]

BLAST of Csor.00g301970 vs. ExPASy TrEMBL
Match: A0A6J1FZY8 (copper transport protein ATX1-like OS=Cucurbita moschata OX=3662 GN=LOC111449423 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 2.60e-63
Identity = 125/132 (94.70%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAA---PAE 120
           GKKTAYWEDEAP  APAPAAAAAAAPAPAAAPAA+PAPEAAPA APASEAAPAA   PAE
Sbjct: 61  GKKTAYWEDEAPATAPAPAAAAAAAPAPAAAPAASPAPEAAPAAAPASEAAPAAAAAPAE 120

Query: 121 AEAKPAETAAAV 129
           AEAKPAETAAAV
Sbjct: 121 AEAKPAETAAAV 132

[Close]

BLAST of Csor.00g301970 vs. ExPASy TrEMBL
Match: A0A6J1I011 (copper transport protein ATX1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467756 PE=4 SV=1)

HSP 1 Score: 178 bits (451), Expect = 2.54e-55
Identity = 116/131 (88.55%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVRRVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAA--PAEA 120
           GKKTAYWEDEAP AA     AAAAAPAPAAAPAAAPAP AAPA APA EAAPAA  PAEA
Sbjct: 61  GKKTAYWEDEAPAAA-----AAAAAPAPAAAPAAAPAPVAAPAAAPAPEAAPAAAPPAEA 120

Query: 121 EAKPAETAAAV 129
           EAKPAE+ AAV
Sbjct: 121 EAKPAESVAAV 126

[Close]

BLAST of Csor.00g301970 vs. ExPASy TrEMBL
Match: A0A6J1HXJ6 (copper transport protein ATX1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467756 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 1.68e-50
Identity = 104/129 (80.62%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVRRVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAAPAEAEA 120
           GKKTAYWEDEAP AAPAP AA          PAAAPAPEAAPA AP        PAEAEA
Sbjct: 61  GKKTAYWEDEAPAAAPAPVAA----------PAAAPAPEAAPAAAP--------PAEAEA 111

Query: 121 KPAETAAAV 129
           KPAE+ AAV
Sbjct: 121 KPAESVAAV 111

[Close]

BLAST of Csor.00g301970 vs. ExPASy TrEMBL
Match: A0A6J1HTV3 (copper transport protein ATX1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467756 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 1.84e-49
Identity = 103/129 (79.84%), Postives = 105/129 (81.40%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVRRVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAAPAEAEA 120
           GKKTAYWEDEAP            APAP AAPAAAPAPEAAPA AP        PAEAEA
Sbjct: 61  GKKTAYWEDEAP------------APAPVAAPAAAPAPEAAPAAAP--------PAEAEA 109

Query: 121 KPAETAAAV 129
           KPAE+ AAV
Sbjct: 121 KPAESVAAV 109

[Close]

BLAST of Csor.00g301970 vs. ExPASy TrEMBL
Match: A0A6J1JL25 (copper transport protein ATX1-like OS=Cucurbita maxima OX=3661 GN=LOC111485531 PE=4 SV=1)

HSP 1 Score: 140 bits (354), Expect = 3.90e-41
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV RDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAPTA 74
          GKKTAYWED+AP A
Sbjct: 61 GKKTAYWEDDAPAA 74

[Close]

BLAST of Csor.00g301970 vs. TAIR 10
Match: AT1G66240.1 (homolog of anti-oxidant 1 )

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25
Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQT VL+VAM+C+GCVGAV+RVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KT
Sbjct: 31  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 90

Query: 61  GKKTAYWEDEAPTA 75
           GKKTA+WE E  TA
Sbjct: 91  GKKTAFWEAEGETA 104

[Close]

BLAST of Csor.00g301970 vs. TAIR 10
Match: AT1G66240.2 (homolog of anti-oxidant 1 )

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 47/64 (73.44%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 11 MSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDE 70
          M+C+GCVGAV+RVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KTGKKTA+WE E
Sbjct: 1  MTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKKTAFWEAE 60

Query: 71 APTA 75
            TA
Sbjct: 61 GETA 64

[Close]

BLAST of Csor.00g301970 vs. TAIR 10
Match: AT3G56240.1 (copper chaperone )

HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17
Identity = 69/124 (55.65%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNVE + VFQTVSKT
Sbjct: 1   MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61  GKKTAYWEDEAPTAAPAPAAAAAAAPAPAAAPAAAPAPEAAPATAPASEAAPAAPAEAEA 120
           GKKT+YW    P  A A   A A             A     A   A        AEAE 
Sbjct: 61  GKKTSYW----PVEAEAEPKAEADPKVETVTETKTEAETKTEAKVDAKADVEPKAAEAET 120

Query: 121 KPAE 125
           KP++
Sbjct: 121 KPSQ 120

[Close]

BLAST of Csor.00g301970 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 7.4e-12
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 7  LKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAY 66
          L V M C+GC   VRR + KL+GV+T +ID+D QKVTV G V+R+ V + V +TG+   Y
Sbjct: 20 LLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEY 79

Query: 67 W 68
          W
Sbjct: 80 W 80

[Close]

BLAST of Csor.00g301970 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 5.3e-10
Identity = 26/64 (40.62%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 4  TTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKK 63
          T VL+V++ C+GC   ++++L K++GV T +ID+  QKVTV GNVE +++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

The following BLAST results are available for this feature:

BLAST of Csor.00g301970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94BT9	1.6e-24	74.32	Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2	[more]
O82089	4.8e-16	55.65	Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1	[more]
B3H6D0	1.0e-10	50.82	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]
Q84J88	7.4e-09	40.63	Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX...	[more]
F4JZL7	2.8e-08	46.15	Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX...	[more]

BLAST of Csor.00g301970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573880.1	9.16e-68	100.00	Copper transport protein ATX1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022945074.1	5.36e-63	94.70	copper transport protein ATX1-like [Cucurbita moschata]	[more]
XP_023541206.1	2.09e-60	92.42	copper transport protein ATX1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968569.1	5.25e-55	88.55	copper transport protein ATX1-like isoform X1 [Cucurbita maxima]	[more]
XP_022968570.1	3.48e-50	80.62	copper transport protein ATX1-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Csor.00g301970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZY8	2.60e-63	94.70	copper transport protein ATX1-like OS=Cucurbita moschata OX=3662 GN=LOC111449423...	[more]
A0A6J1I011	2.54e-55	88.55	copper transport protein ATX1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HXJ6	1.68e-50	80.62	copper transport protein ATX1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HTV3	1.84e-49	79.84	copper transport protein ATX1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1JL25	3.90e-41	94.59	copper transport protein ATX1-like OS=Cucurbita maxima OX=3661 GN=LOC111485531 P...	[more]

BLAST of Csor.00g301970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66240.1	1.2e-25	74.32	homolog of anti-oxidant 1	[more]
AT1G66240.2	1.3e-21	73.44	homolog of anti-oxidant 1	[more]
AT3G56240.1	3.4e-17	55.65	copper chaperone	[more]
AT3G56891.1	7.4e-12	50.82	Heavy metal transport/detoxification superfamily protein	[more]
AT5G27690.1	5.3e-10	40.63	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 7..63 e-value: 7.4E-14 score: 51.9
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 3..66 score: 12.955451
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 11..63 e-value: 1.27763E-11 score: 54.1489
None	No IPR available	GENE3D	3.30.70.100		coord: 1..66 e-value: 2.5E-22 score: 80.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..129
None	No IPR available	PANTHER	PTHR22814:SF310	COPPER TRANSPORT PROTEIN CCH	coord: 1..127
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..127
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 2..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g301970.m01	Csor.00g301970.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding