Csor.00g295530 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g295530
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionCytochrome c oxidase subunit
LocationCsor_Chr05: 3516058 .. 3518012 (+)
RNA-Seq ExpressionCsor.00g295530
SyntenyCsor.00g295530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAGGTAAGCTTCGTTTCGCTATCTTTCTGTGTTTAGTTTCGAGAAAAATTGATGATGGTGAGTTTTTCATTTCATTTTTCCCATCATTAACGGCCCTGATTTGGATGCGATAATCGTTTTCTGTATGAAAAATATGTTTCCTTAATGTTTGTTTTGTTTGGATTTCACGTATAACCTCGATTATCGTTTAGAGGAATGGTGTTTTTGCATTTTTTTTAGATGCTACCGACAAACCTGCTTCACTCGTCACAAATTCTGACGTACTGGTAGGATTTAGATTTCCTTAGAATTTAGGAGATGGATTGTGTTCTAAACTGGATTGTGTTCTAAACTGGATTATGTTCTGCGTGCGACGAGCGATGAAACTCTTCAACGCTTGTTGGATATATTGGTCGGAGTCTTCACAAATGTTTCTGATTGAAAGATAATTGATATCATTGTGGAAAAAGAATATAAAGAGGAGATGCAGCACCATATATCCTGGCAAATGAAAATTCTCTGACCAGTGTCCAAGCAAACATCACACGAGGGGAGAAAGAACTGATGATTTGAGAAATATATGCTTATTAGAATAGTAGAAACTAGGACATGGGAAGGATGAAACATATCTCCGTTCACACCTGAAAAGGATAGTAAATAGAACTCCCCATAAGCAATAATAGAACAAAGATCAGAAGCACATTAAAAAATCTGTTGTTCATGGATGTTTTATGTCTGCCCATGCTTCATACTTGACATTGTGTACATATTGTATGTAATGTTCATTGCTGTTATCAATAATTGAAGATTGTAACCTAGGAAAGTCAGTTAGCATATTGTTGTTTGCCATGAGTTGAGGTAAAGAAGGCACAAGATAATTAGTAACATGTTGCAATGTTCTGTTCACTCATATTGGAATGATGTTATTAAGAAAACGATTACTAGATACCTGTATCTGATTGAATGAAAATTTAATGATGCGTACCTCTTTGTTACATCGGCGAACAGATATATTGAGTATGTATTAGACAAGTGGTAATCCTTCATCAAGATAATCCTCTTCAACGTCCATTTTATTTTTGTTTTTCCTATGCCTTTTTGTTCTTTTATCTCAGCTTGAGCTGAAAACAGCACCTGCCGACTTCCGATTCCCTACGACAAATCAAACCAGGCACTGTTTCACTCGTTACATTGAGTTCCACAGGTCCATTTTTCTTACAACTTGGAACGAGAGTTAAAATTGAAAAATGAAAGGGTCTATAGTCTTCTCTGTTTTCATCATTAGTTTTCCCCTTAAGTATGCGGAACTTTCCACAGGTGCCTGGCAGCGAAGGGCGAGGAGTCCGGTGAATGCGAGAGATTTGCAAAGTATTATCGTGCCCTTTGCCCTGGTGAATGGGTGAGTTTTGTTCAACGTTTTTTTATCCTATTGATGCAGTTCTGCCAACATTTAGGTGCATGGCCACAAGAATTCTTTTGCCTCTTTCAATATTAGCATTGCTTGATTTTTTTTATGCAAACTCTCTGGATTTAATCCTAAGTTCCATGCATAAAATTTTCTCTACGAACAAGGAAGAACCTTCTTTGATACCTCTATGCCCTGTGGCGCTATATTACATGTTTATATTCTTATTGGCTACTGAAGCTATTTTGCCTTGAACTTCATGTATTTTCTTTTTCTATCAGGTTAGGCAATAATATTTAAATTTTAGTAGATGTTGAATGATTAAAATCAAAATTGTAAAAGTCTAGGACCACAATTCTAAAAAAATGATAGATCAGATATTTAGGAGCCAAAACTATATCTGAACCACGCCCATGAATATCTGCACCATGATTCTATGGGTTGTTGAGTCTATCAGCCACCTTTATGAACCTCTGCCTGTTGATATACTTAAACTGCACCGTTCCTGCAGGTCGAAAAATGGAATGAGCAGAGAGAGAATGGCACATTCCCCGGCCCTCTTTGA

mRNA sequence

ATGGCCGAGCTTGAGCTGAAAACAGCACCTGCCGACTTCCGATTCCCTACGACAAATCAAACCAGGCACTGTTTCACTCGTTACATTGAGTTCCACAGGTGCCTGGCAGCGAAGGGCGAGGAGTCCGGTGAATGCGAGAGATTTGCAAAGTATTATCGTGCCCTTTGCCCTGGTGAATGGGTCGAAAAATGGAATGAGCAGAGAGAGAATGGCACATTCCCCGGCCCTCTTTGA

Coding sequence (CDS)

ATGGCCGAGCTTGAGCTGAAAACAGCACCTGCCGACTTCCGATTCCCTACGACAAATCAAACCAGGCACTGTTTCACTCGTTACATTGAGTTCCACAGGTGCCTGGCAGCGAAGGGCGAGGAGTCCGGTGAATGCGAGAGATTTGCAAAGTATTATCGTGCCCTTTGCCCTGGTGAATGGGTCGAAAAATGGAATGAGCAGAGAGAGAATGGCACATTCCCCGGCCCTCTTTGA

Protein sequence

MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Homology
[Close]
BLAST of Csor.00g295530 vs. ExPASy Swiss-Prot
Match: Q945L0 (Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.6e-38
Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0 

Query: 3  ELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEWVE 62
          E+ELKTAPADFRFPTTNQTRHCFTRYIEFHRC  AKGEES +CERFAKYYRALCPGEWV+
Sbjct: 4  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWVD 63

Query: 63 KWNEQRENGTFPGPL 78
          KWNEQRE+GTFPGPL
Sbjct: 64 KWNEQRESGTFPGPL 78

[Close]
BLAST of Csor.00g295530 vs. ExPASy Swiss-Prot
Match: Q9SUD3 (Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=2 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 4.5e-38
Identity = 67/75 (89.33%), Postives = 71/75 (94.67%), Query Frame = 0 

Query: 3  ELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEWVE 62
          E+ELKTAPADFRFPTTNQTRHCFTRYIEFHRC  AKGE++ ECERFAKYYRALCPGEWV+
Sbjct: 4  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWVD 63

Query: 63 KWNEQRENGTFPGPL 78
          KWNEQRE GTFPGPL
Sbjct: 64 KWNEQRETGTFPGPL 78

[Close]
BLAST of Csor.00g295530 vs. ExPASy Swiss-Prot
Match: Q9S7L9 (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.1e-35
Identity = 58/75 (77.33%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 3   ELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEWVE 62
           E++L+TAPADFRFPTTNQTRHCFTRY+E+HRC+AAKG+++ EC++FAK+YR+LCP EWV+
Sbjct: 116 EIKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVD 175

Query: 63  KWNEQRENGTFPGPL 78
           +WNEQRENGTFPGPL
Sbjct: 176 RWNEQRENGTFPGPL 190

[Close]
BLAST of Csor.00g295530 vs. ExPASy Swiss-Prot
Match: O94581 (Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox12 PE=3 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 3.0e-21
Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 0 

Query: 1  MAELELKTAPADF---------RFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKY 60
          M+E E + AP  F         RFP TNQT+HCF  YI++ RC+ AKGE+   C++F   
Sbjct: 1  MSEQEDQEAPKQFTFGTVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHA 60

Query: 61 YRALCPGEWVEKWNEQRENGTFPGPL 78
          Y++LCP EWVE+W+EQRENGTFP P+
Sbjct: 61 YQSLCPMEWVERWDEQRENGTFPAPI 86

[Close]
BLAST of Csor.00g295530 vs. ExPASy Swiss-Prot
Match: P14854 (Cytochrome c oxidase subunit 6B1 OS=Homo sapiens OX=9606 GN=COX6B1 PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-18
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0 

Query: 7  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LAAKGEESGECERFAKYYRALCPGEWVEK 66
          KTAP D RFP  NQTR+C+  Y++FHRC   + AKG +   CE + + Y++LCP  WV  
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTD 72

Query: 67 WNEQRENGTFPGPL 78
          W+EQR  GTFPG +
Sbjct: 73 WDEQRAEGTFPGKI 86

[Close]
BLAST of Csor.00g295530 vs. NCBI nr
Match: KAG6598840.1 (Cytochrome c oxidase subunit 6b-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174 bits (441), Expect = 4.56e-55
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60
          MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60

Query: 61 VEKWNEQRENGTFPGPL 77
          VEKWNEQRENGTFPGPL
Sbjct: 61 VEKWNEQRENGTFPGPL 77

[Close]
BLAST of Csor.00g295530 vs. NCBI nr
Match: XP_022937604.1 (cytochrome c oxidase subunit 6b-2-like [Cucurbita moschata] >XP_022937605.1 cytochrome c oxidase subunit 6b-2-like [Cucurbita moschata] >KAG6586029.1 Cytochrome c oxidase subunit 6b-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020805.1 Cytochrome c oxidase subunit 6b-2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7029783.1 Cytochrome c oxidase subunit 6b-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 173 bits (439), Expect = 9.20e-55
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60
          MAE+ELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60

Query: 61 VEKWNEQRENGTFPGPL 77
          VEKWNEQRENGTFPGPL
Sbjct: 61 VEKWNEQRENGTFPGPL 77

[Close]
BLAST of Csor.00g295530 vs. NCBI nr
Match: XP_022153389.1 (cytochrome c oxidase subunit 6b-2 [Momordica charantia])

HSP 1 Score: 172 bits (436), Expect = 2.64e-54
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60
          MAE+ELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60

Query: 61 VEKWNEQRENGTFPGPL 77
          VEKWNEQRENGTFPGPL
Sbjct: 61 VEKWNEQRENGTFPGPL 77

[Close]
BLAST of Csor.00g295530 vs. NCBI nr
Match: XP_022929560.1 (cytochrome c oxidase subunit 6b-2 [Cucurbita moschata] >XP_023536781.1 cytochrome c oxidase subunit 6b-2 [Cucurbita pepo subsp. pepo] >XP_023547233.1 cytochrome c oxidase subunit 6b-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172 bits (435), Expect = 3.75e-54
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60
          MAE+ELKTAPADFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 60

Query: 61 VEKWNEQRENGTFPGPL 77
          VEKWNEQRENGTFPGPL
Sbjct: 61 VEKWNEQRENGTFPGPL 77

[Close]
BLAST of Csor.00g295530 vs. NCBI nr
Match: XP_022997477.1 (cytochrome c oxidase subunit 6b-2 [Cucurbita maxima])

HSP 1 Score: 171 bits (432), Expect = 1.08e-53
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60
          MAE+ELKTAPADFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 60

Query: 61 VEKWNEQRENGTFPGPL 77
          VE+WNEQRENGTFPGPL
Sbjct: 61 VERWNEQRENGTFPGPL 77

[Close]
BLAST of Csor.00g295530 vs. ExPASy TrEMBL
Match: A0A6J1FBN5 (Cytochrome c oxidase subunit OS=Cucurbita moschata OX=3662 GN=LOC111443962 PE=3 SV=1)

HSP 1 Score: 173 bits (439), Expect = 4.46e-55
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60
          MAE+ELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60

Query: 61 VEKWNEQRENGTFPGPL 77
          VEKWNEQRENGTFPGPL
Sbjct: 61 VEKWNEQRENGTFPGPL 77

[Close]
BLAST of Csor.00g295530 vs. ExPASy TrEMBL
Match: A0A6J1DIX3 (Cytochrome c oxidase subunit OS=Momordica charantia OX=3673 GN=LOC111020894 PE=3 SV=1)

HSP 1 Score: 172 bits (436), Expect = 1.28e-54
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60
          MAE+ELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEW 60

Query: 61 VEKWNEQRENGTFPGPL 77
          VEKWNEQRENGTFPGPL
Sbjct: 61 VEKWNEQRENGTFPGPL 77

[Close]
BLAST of Csor.00g295530 vs. ExPASy TrEMBL
Match: A0A6J1EUQ5 (Cytochrome c oxidase subunit OS=Cucurbita moschata OX=3662 GN=LOC111436111 PE=3 SV=1)

HSP 1 Score: 172 bits (435), Expect = 1.82e-54
Identity = 75/77 (97.40%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60
          MAE+ELKTAPADFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 60

Query: 61 VEKWNEQRENGTFPGPL 77
          VEKWNEQRENGTFPGPL
Sbjct: 61 VEKWNEQRENGTFPGPL 77

[Close]
BLAST of Csor.00g295530 vs. ExPASy TrEMBL
Match: A0A6J1I3B0 (Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111468624 PE=3 SV=1)

HSP 1 Score: 171 bits (432), Expect = 5.22e-54
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60
          MAE+ELKTAPADFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 60

Query: 61 VEKWNEQRENGTFPGPL 77
          VEKWN+QRENGTFPGPL
Sbjct: 61 VEKWNDQRENGTFPGPL 77

[Close]
BLAST of Csor.00g295530 vs. ExPASy TrEMBL
Match: A0A6J1K554 (Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111492384 PE=3 SV=1)

HSP 1 Score: 171 bits (432), Expect = 5.22e-54
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0 

Query: 1  MAELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEW 60
          MAE+ELKTAPADFRFPTTNQTRHCFTRYIEFHRCL AKGEESGECERFAKYYRALCPGEW
Sbjct: 1  MAEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEW 60

Query: 61 VEKWNEQRENGTFPGPL 77
          VE+WNEQRENGTFPGPL
Sbjct: 61 VERWNEQRENGTFPGPL 77

[Close]
BLAST of Csor.00g295530 vs. TAIR 10
Match: AT5G57815.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 159.5 bits (402), Expect = 1.1e-39
Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0 

Query: 3  ELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEWVE 62
          E+ELKTAPADFRFPTTNQTRHCFTRYIEFHRC  AKGEES +CERFAKYYRALCPGEWV+
Sbjct: 4  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEWVD 63

Query: 63 KWNEQRENGTFPGPL 78
          KWNEQRE+GTFPGPL
Sbjct: 64 KWNEQRESGTFPGPL 78

[Close]
BLAST of Csor.00g295530 vs. TAIR 10
Match: AT4G28060.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 157.9 bits (398), Expect = 3.2e-39
Identity = 67/75 (89.33%), Postives = 71/75 (94.67%), Query Frame = 0 

Query: 3  ELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEWVE 62
          E+ELKTAPADFRFPTTNQTRHCFTRYIEFHRC  AKGE++ ECERFAKYYRALCPGEWV+
Sbjct: 4  EIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEWVD 63

Query: 63 KWNEQRENGTFPGPL 78
          KWNEQRE GTFPGPL
Sbjct: 64 KWNEQRETGTFPGPL 78

[Close]
BLAST of Csor.00g295530 vs. TAIR 10
Match: AT1G22450.1 (cytochrome C oxidase 6B )

HSP 1 Score: 147.5 bits (371), Expect = 4.4e-36
Identity = 58/75 (77.33%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 3   ELELKTAPADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEWVE 62
           E++L+TAPADFRFPTTNQTRHCFTRY+E+HRC+AAKG+++ EC++FAK+YR+LCP EWV+
Sbjct: 116 EIKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVD 175

Query: 63  KWNEQRENGTFPGPL 78
           +WNEQRENGTFPGPL
Sbjct: 176 RWNEQRENGTFPGPL 190

[Close]
BLAST of Csor.00g295530 vs. TAIR 10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 65.9 bits (159), Expect = 1.7e-11
Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0 

Query: 9   APADFRFPTTNQTRHCFTRYIEFHRCLAAKGEESGECERFAKYYRALCPGEWVEK-WNEQ 68
           A  + RFP TN+TRHCF R++++H+C+   G ++ +C     Y R++CP E V K W + 
Sbjct: 59  AAVEERFPVTNETRHCFNRFMQYHKCIEKNGRDANDCNNLRDYVRSICPEELVSKIWLKS 118

Query: 69  REN 71
             N
Sbjct: 119 GRN 121

The following BLAST results are available for this feature:
BLAST of Csor.00g295530 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q945L01.6e-3890.67Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=... [more]
Q9SUD34.5e-3889.33Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=... [more]
Q9S7L96.1e-3577.33Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=... [more]
O945813.0e-2152.33Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (str... [more]
P148548.9e-1851.35Cytochrome c oxidase subunit 6B1 OS=Homo sapiens OX=9606 GN=COX6B1 PE=1 SV=2[more]
BLAST of Csor.00g295530 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6598840.14.56e-55100.00Cytochrome c oxidase subunit 6b-2, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022937604.19.20e-5598.70cytochrome c oxidase subunit 6b-2-like [Cucurbita moschata] >XP_022937605.1 cyto... [more]
XP_022153389.12.64e-5497.40cytochrome c oxidase subunit 6b-2 [Momordica charantia][more]
XP_022929560.13.75e-5497.40cytochrome c oxidase subunit 6b-2 [Cucurbita moschata] >XP_023536781.1 cytochrom... [more]
XP_022997477.11.08e-5396.10cytochrome c oxidase subunit 6b-2 [Cucurbita maxima][more]
BLAST of Csor.00g295530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FBN54.46e-5598.70Cytochrome c oxidase subunit OS=Cucurbita moschata OX=3662 GN=LOC111443962 PE=3 ... [more]
A0A6J1DIX31.28e-5497.40Cytochrome c oxidase subunit OS=Momordica charantia OX=3673 GN=LOC111020894 PE=3... [more]
A0A6J1EUQ51.82e-5497.40Cytochrome c oxidase subunit OS=Cucurbita moschata OX=3662 GN=LOC111436111 PE=3 ... [more]
A0A6J1I3B05.22e-5496.10Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111468624 PE=3 SV... [more]
A0A6J1K5545.22e-5496.10Cytochrome c oxidase subunit OS=Cucurbita maxima OX=3661 GN=LOC111492384 PE=3 SV... [more]
BLAST of Csor.00g295530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G57815.11.1e-3990.67Cytochrome c oxidase, subunit Vib family protein [more]
AT4G28060.13.2e-3989.33Cytochrome c oxidase, subunit Vib family protein [more]
AT1G22450.14.4e-3677.33cytochrome C oxidase 6B [more]
AT1G32710.11.7e-1139.68Cytochrome c oxidase, subunit Vib family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003213Cytochrome c oxidase, subunit VIbPFAMPF02297COX6Bcoord: 14..73
e-value: 1.2E-17
score: 63.8
IPR003213Cytochrome c oxidase, subunit VIbPIRSFPIRSF000278COX_VIbcoord: 1..77
e-value: 6.9E-37
score: 123.5
IPR003213Cytochrome c oxidase, subunit VIbCDDcd00926Cyt_c_Oxidase_VIbcoord: 3..76
e-value: 3.40405E-37
score: 117.409
IPR036549Cytochrome c oxidase, subunit VIb superfamilyGENE3D1.10.10.140Cytochrome c oxidase, subunit VIbcoord: 1..77
e-value: 1.4E-34
score: 119.8
IPR036549Cytochrome c oxidase, subunit VIb superfamilySUPERFAMILY47694Cytochrome c oxidase subunit hcoord: 4..76
NoneNo IPR availablePANTHERPTHR46281:SF14CYTOCHROME C OXIDASE SUBUNIT 6B-1coord: 3..77
NoneNo IPR availablePANTHERPTHR46281CYTOCHROME C OXIDASE SUBUNIT 6Bcoord: 3..77
NoneNo IPR availablePROSITEPS51808CHCHcoord: 21..64
score: 13.592514

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g295530.m01Csor.00g295530.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
cellular_component GO:0045277 respiratory chain complex IV