Csor.00g259660 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g259660
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein RALF-like 33
Location	Csor_Chr17: 1764706 .. 1765089 (+)
RNA-Seq Expression	Csor.00g259660
Synteny	Csor.00g259660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAACGGCCATCGATTTCTCCGGCGACAACGAGATTCTCTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA

mRNA sequence

ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAACGGCCATCGATTTCTCCGGCGACAACGAGATTCTCTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA

Coding sequence (CDS)

ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAACGGCCATCGATTTCTCCGGCGACAACGAGATTCTCTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA

Protein sequence

MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS

Homology

[Close]

BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-34
Identity = 83/138 (60.14%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 2   GISRVSALIAAFA---VLAAH--FLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAG 61
           G+SR S   A FA   +LA H   + +S+ + +F+GD    F P ++ECRG+IAEC ++ 
Sbjct: 3   GLSRNSGAAAIFAILLILAVHNWSVAVSSQSTEFAGD----FPPFETECRGTIAECSVSA 62

Query: 62  NDDDSG--------FGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRP 121
              D G         G EFEMDSEINRRILAT RYISYGALRRN +PCSRRGASYYNCR 
Sbjct: 63  ALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRR 122

Query: 122 GAQANPYTRGCSAITRCR 127
           GAQANPY+RGCSAITRCR
Sbjct: 123 GAQANPYSRGCSAITRCR 136

[Close]

BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 6.6e-34
Identity = 76/113 (67.26%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 14  AVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEI 73
           A+L  HFL  + T+   SGD    F P +S+C G+IAEC L+  ++      EFEMDSEI
Sbjct: 14  AILTVHFLFAAVTS-QSSGD----FVPIESKCNGTIAECSLSTAEE------EFEMDSEI 73

Query: 74  NRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 127
           NRRILATT+YISYGALRRN VPCSRRGASYYNCR GAQANPY+RGCSAITRCR
Sbjct: 74  NRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-29
Identity = 67/113 (59.29%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 15  VLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEIN 74
           VL   F I  A A D    + ++ A +   C+GSI EC             EFE+DSE N
Sbjct: 11  VLIGAFFISMAAAGDSGAYDWVMPARSGGGCKGSIGECIAEEE--------EFELDSESN 70

Query: 75  RRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS 128
           RRILAT +YISYGAL++N+VPCSRRGASYYNC+PGAQANPY+RGCSAITRCRS
Sbjct: 71  RRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.6e-26
Identity = 60/85 (70.59%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 43  SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGAS 102
           S C GSIAEC  A          E EMDSEINRRILATT+YISY +L+RN+VPCSRRGAS
Sbjct: 45  SGCHGSIAECIGA---------EEEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGAS 104

Query: 103 YYNCRPGAQANPYTRGCSAITRCRS 128
           YYNC+ GAQANPY+RGCS I RCRS
Sbjct: 105 YYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.3e-25
Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 11  AAFAVLAAHFLILSA--TAIDFSGDNEILFAPTK---SECRGSIAECFLAGNDDDSGFGM 70
           A +AV+A   +++SA  +  DF    + + A +    S C GSIAEC             
Sbjct: 6   AIYAVIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEE-------- 65

Query: 71  EFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRC 127
           E E DS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNC+ GAQANPY+RGCS ITRC
Sbjct: 66  EMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRC 118

[Close]

BLAST of Csor.00g259660 vs. NCBI nr
Match: KAG6575064.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253 bits (647), Expect = 6.57e-85
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60
           MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120
           SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 127
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of Csor.00g259660 vs. NCBI nr
Match: XP_022959207.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 251 bits (642), Expect = 3.81e-84
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60
           MGISRVSALIAAFAVLAAHFLILSA AIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120
           SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 127
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of Csor.00g259660 vs. NCBI nr
Match: XP_023547686.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248 bits (632), Expect = 1.28e-82
Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60
           MGISRVSALIAAF VLAAHFLI SATAIDFSGDNEILFAPTKSECRGSIAECFLAGN+DD
Sbjct: 1   MGISRVSALIAAFVVLAAHFLISSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNNDD 60

Query: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120
           SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 127
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of Csor.00g259660 vs. NCBI nr
Match: XP_023006467.1 (protein RALF-like 33 [Cucurbita maxima])

HSP 1 Score: 246 bits (628), Expect = 5.20e-82
Identity = 124/127 (97.64%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60
           MGISRVSALIAAFAVLAAHFLI SATAIDFSGDNEILFAPTKSECRGSI ECFLAGN DD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLISSATAIDFSGDNEILFAPTKSECRGSITECFLAGNYDD 60

Query: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120
           SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 127
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of Csor.00g259660 vs. NCBI nr
Match: KAG7013637.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 244 bits (623), Expect = 2.82e-81
Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60
           MGISRVSALIAAFAVLAAHFLILSATA  FSGDNEILFAPTKSECRGSIAECFLAGNDDD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSATA--FSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120
           SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 127
           AITRCRS
Sbjct: 121 AITRCRS 125

[Close]

BLAST of Csor.00g259660 vs. ExPASy TrEMBL
Match: A0A6J1H3W7 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1)

HSP 1 Score: 251 bits (642), Expect = 1.84e-84
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60
           MGISRVSALIAAFAVLAAHFLILSA AIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120
           SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 127
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of Csor.00g259660 vs. ExPASy TrEMBL
Match: A0A6J1KVY0 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1)

HSP 1 Score: 246 bits (628), Expect = 2.52e-82
Identity = 124/127 (97.64%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60
           MGISRVSALIAAFAVLAAHFLI SATAIDFSGDNEILFAPTKSECRGSI ECFLAGN DD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLISSATAIDFSGDNEILFAPTKSECRGSITECFLAGNYDD 60

Query: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120
           SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 127
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of Csor.00g259660 vs. ExPASy TrEMBL
Match: A0A6J1C9N4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1)

HSP 1 Score: 207 bits (527), Expect = 5.95e-67
Identity = 103/127 (81.10%), Postives = 114/127 (89.76%), Query Frame = 0


Query: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60
           M ISRVS+L+AAFA+ AAH L+ SATA DFSGD+++L+ P KSECRGSIAEC LAG  DD
Sbjct: 1   MEISRVSSLLAAFAIFAAHLLLSSATAADFSGDHKLLYVPAKSECRGSIAECLLAG--DD 60

Query: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120
           SGFG EFEMDSEINRRILAT RYISYGAL+RN+VPCSRRGASYYNC+PGAQANPY RGCS
Sbjct: 61  SGFGTEFEMDSEINRRILATMRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCS 120

Query: 121 AITRCRS 127
           AITRCRS
Sbjct: 121 AITRCRS 125

[Close]

BLAST of Csor.00g259660 vs. ExPASy TrEMBL
Match: A0A6J1KG89 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.50e-65
Identity = 96/127 (75.59%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60
           M ISRV + +AA A++AAHFL+ SA  +DFSGD+++LF P +S+CRGSIAECFLAG+D+D
Sbjct: 1   MEISRVFSFLAASAIIAAHFLLSSAMVVDFSGDDKLLFVPAESKCRGSIAECFLAGDDND 60

Query: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120
           S FGMEFEMDSEINRRILA +RY+SYGAL+RN+VPCSRRGASYYNC+PGAQANPY RGC+
Sbjct: 61  SAFGMEFEMDSEINRRILAASRYLSYGALKRNSVPCSRRGASYYNCQPGAQANPYRRGCN 120

Query: 121 AITRCRS 127
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of Csor.00g259660 vs. ExPASy TrEMBL
Match: A0A6J1EV64 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111436882 PE=3 SV=1)

HSP 1 Score: 203 bits (516), Expect = 3.02e-65
Identity = 96/127 (75.59%), Postives = 116/127 (91.34%), Query Frame = 0


Query: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60
           M ISRV + +AA A++AAHFL+ SA A+DFSG +++LF P +S+CRGSIAECFLAG+D+D
Sbjct: 1   MEISRVFSFLAASAIIAAHFLLSSAMAVDFSGGDKLLFVPAESKCRGSIAECFLAGDDND 60

Query: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120
           S FGMEFEMDSEINRRILA++RY+SYGAL+RN+VPCSRRGASYYNC+PGAQANPY RGC+
Sbjct: 61  SAFGMEFEMDSEINRRILASSRYLSYGALKRNSVPCSRRGASYYNCQPGAQANPYRRGCN 120

Query: 121 AITRCRS 127
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of Csor.00g259660 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35
Identity = 83/138 (60.14%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 2   GISRVSALIAAFA---VLAAH--FLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAG 61
           G+SR S   A FA   +LA H   + +S+ + +F+GD    F P ++ECRG+IAEC ++ 
Sbjct: 3   GLSRNSGAAAIFAILLILAVHNWSVAVSSQSTEFAGD----FPPFETECRGTIAECSVSA 62

Query: 62  NDDDSG--------FGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRP 121
              D G         G EFEMDSEINRRILAT RYISYGALRRN +PCSRRGASYYNCR 
Sbjct: 63  ALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRR 122

Query: 122 GAQANPYTRGCSAITRCR 127
           GAQANPY+RGCSAITRCR
Sbjct: 123 GAQANPYSRGCSAITRCR 136

[Close]

BLAST of Csor.00g259660 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 144.8 bits (364), Expect = 4.7e-35
Identity = 76/113 (67.26%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 14  AVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEI 73
           A+L  HFL  + T+   SGD    F P +S+C G+IAEC L+  ++      EFEMDSEI
Sbjct: 14  AILTVHFLFAAVTS-QSSGD----FVPIESKCNGTIAECSLSTAEE------EFEMDSEI 73

Query: 74  NRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 127
           NRRILATT+YISYGALRRN VPCSRRGASYYNCR GAQANPY+RGCSAITRCR
Sbjct: 74  NRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Csor.00g259660 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 117.9 bits (294), Expect = 6.1e-27
Identity = 60/85 (70.59%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 43  SECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGAS 102
           S C GSIAEC  A          E EMDSEINRRILATT+YISY +L+RN+VPCSRRGAS
Sbjct: 45  SGCHGSIAECIGA---------EEEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGAS 104

Query: 103 YYNCRPGAQANPYTRGCSAITRCRS 128
           YYNC+ GAQANPY+RGCS I RCRS
Sbjct: 105 YYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Csor.00g259660 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 115.5 bits (288), Expect = 3.0e-26
Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 11  AAFAVLAAHFLILSA--TAIDFSGDNEILFAPTK---SECRGSIAECFLAGNDDDSGFGM 70
           A +AV+A   +++SA  +  DF    + + A +    S C GSIAEC             
Sbjct: 6   AIYAVIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEE-------- 65

Query: 71  EFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRC 127
           E E DS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNC+ GAQANPY+RGCS ITRC
Sbjct: 66  EMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRC 118

[Close]

BLAST of Csor.00g259660 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 88.6 bits (218), Expect = 4.0e-18
Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 65  MEFEMDSEINRRILATTR-YISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAIT 124
           +++ MDSE NRR LA  R YISYGALR+NNVPCSRRG SYY+C+   +ANPY RGCS IT
Sbjct: 44  LDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVIT 103

Query: 125 RC 126
            C
Sbjct: 104 HC 105

The following BLAST results are available for this feature:

BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUS7	1.7e-34	60.14	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q8L9P8	6.6e-34	67.26	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q945T0	4.9e-29	59.29	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9SRY3	8.6e-26	70.59	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q9MA62	4.3e-25	53.72	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of Csor.00g259660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575064.1	6.57e-85	100.00	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022959207.1	3.81e-84	99.21	protein RALF-like 33 [Cucurbita moschata]	[more]
XP_023547686.1	1.28e-82	97.64	protein RALF-like 33 [Cucurbita pepo subsp. pepo]	[more]
XP_023006467.1	5.20e-82	97.64	protein RALF-like 33 [Cucurbita maxima]	[more]
KAG7013637.1	2.82e-81	98.43	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Csor.00g259660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3W7	1.84e-84	99.21	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1	[more]
A0A6J1KVY0	2.52e-82	97.64	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1	[more]
A0A6J1C9N4	5.95e-67	81.10	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1	[more]
A0A6J1KG89	1.50e-65	75.59	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1	[more]
A0A6J1EV64	3.02e-65	75.59	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111436882 PE=3 SV=1	[more]

BLAST of Csor.00g259660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16570.1	1.2e-35	60.14	rapid alkalinization factor 23	[more]
AT4G15800.1	4.7e-35	67.26	ralf-like 33	[more]
AT1G02900.1	6.1e-27	70.59	rapid alkalinization factor 1	[more]
AT3G05490.1	3.0e-26	53.72	ralf-like 22	[more]
AT2G33775.1	4.0e-18	67.74	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 66..126 e-value: 5.7E-31 score: 107.3
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 8..127
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 8..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g259660.m01	Csor.00g259660.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region