Csor.00g259660 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAACGGCCATCGATTTCTCCGGCGACAACGAGATTCTCTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAACGGCCATCGATTTCTCCGGCGACAACGAGATTCTCTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA ATGGGTATCTCACGCGTTTCTGCTCTCATTGCTGCGTTCGCCGTTCTCGCCGCTCATTTTCTGATCTTATCGGCAACGGCCATCGATTTCTCCGGCGACAACGAGATTCTCTTTGCTCCGACTAAATCCGAGTGCCGAGGCTCAATCGCCGAGTGCTTTCTCGCTGGAAACGATGACGATTCCGGCTTCGGAATGGAGTTCGAGATGGACTCTGAAATCAATCGCCGAATTCTAGCGACTACTCGCTACATCAGCTATGGTGCTCTGAGGAGGAACAACGTTCCTTGCTCCCGCCGCGGCGCTTCTTACTACAACTGCCGTCCAGGCGCTCAGGCGAATCCTTACACCCGTGGTTGTAGCGCCATTACTCGCTGCCGAAGTTAA MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDDSGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS Homology
BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.7e-34 Identity = 83/138 (60.14%), Postives = 98/138 (71.01%), Query Frame = 0
BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 6.6e-34 Identity = 76/113 (67.26%), Postives = 87/113 (76.99%), Query Frame = 0
BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 4.9e-29 Identity = 67/113 (59.29%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 8.6e-26 Identity = 60/85 (70.59%), Postives = 66/85 (77.65%), Query Frame = 0
BLAST of Csor.00g259660 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 4.3e-25 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of Csor.00g259660 vs. NCBI nr
Match: KAG6575064.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 253 bits (647), Expect = 6.57e-85 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Csor.00g259660 vs. NCBI nr
Match: XP_022959207.1 (protein RALF-like 33 [Cucurbita moschata]) HSP 1 Score: 251 bits (642), Expect = 3.81e-84 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0
BLAST of Csor.00g259660 vs. NCBI nr
Match: XP_023547686.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 248 bits (632), Expect = 1.28e-82 Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of Csor.00g259660 vs. NCBI nr
Match: XP_023006467.1 (protein RALF-like 33 [Cucurbita maxima]) HSP 1 Score: 246 bits (628), Expect = 5.20e-82 Identity = 124/127 (97.64%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Csor.00g259660 vs. NCBI nr
Match: KAG7013637.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 244 bits (623), Expect = 2.82e-81 Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 0
BLAST of Csor.00g259660 vs. ExPASy TrEMBL
Match: A0A6J1H3W7 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1) HSP 1 Score: 251 bits (642), Expect = 1.84e-84 Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0
BLAST of Csor.00g259660 vs. ExPASy TrEMBL
Match: A0A6J1KVY0 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1) HSP 1 Score: 246 bits (628), Expect = 2.52e-82 Identity = 124/127 (97.64%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Csor.00g259660 vs. ExPASy TrEMBL
Match: A0A6J1C9N4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1) HSP 1 Score: 207 bits (527), Expect = 5.95e-67 Identity = 103/127 (81.10%), Postives = 114/127 (89.76%), Query Frame = 0
BLAST of Csor.00g259660 vs. ExPASy TrEMBL
Match: A0A6J1KG89 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1) HSP 1 Score: 204 bits (518), Expect = 1.50e-65 Identity = 96/127 (75.59%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of Csor.00g259660 vs. ExPASy TrEMBL
Match: A0A6J1EV64 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111436882 PE=3 SV=1) HSP 1 Score: 203 bits (516), Expect = 3.02e-65 Identity = 96/127 (75.59%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Csor.00g259660 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 ) HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35 Identity = 83/138 (60.14%), Postives = 98/138 (71.01%), Query Frame = 0
BLAST of Csor.00g259660 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 ) HSP 1 Score: 144.8 bits (364), Expect = 4.7e-35 Identity = 76/113 (67.26%), Postives = 87/113 (76.99%), Query Frame = 0
BLAST of Csor.00g259660 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 ) HSP 1 Score: 117.9 bits (294), Expect = 6.1e-27 Identity = 60/85 (70.59%), Postives = 66/85 (77.65%), Query Frame = 0
BLAST of Csor.00g259660 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 ) HSP 1 Score: 115.5 bits (288), Expect = 3.0e-26 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of Csor.00g259660 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 ) HSP 1 Score: 88.6 bits (218), Expect = 4.0e-18 Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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