Csor.00g255560 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g255560
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	histone deacetylase complex subunit SAP18-like
Location	Csor_Chr06: 8503142 .. 8505603 (+)
RNA-Seq Expression	Csor.00g255560
Synteny	Csor.00g255560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCCTCCGGGCCTCGCCTATAAACTGCAGAAGCTTCCAGAAGTAGCAGAAAATACAGACACAGAAATGGCGGGAGAAGCAGAAGCACCGAGGAGAGCTTATGGCGCTCCTCCAAGAGCCCCTCATGCGCCTCCTCGTCCTCGCTTGGAGCCAGTCGATCGCGAGAAGGTATCTCTTTCTTTCCTTCTCATCTTTTACTTTTAGGGTTTCTGTCCGTTCCATCATCATGTCAGTTTTAATTTTGGTGTTCATTAGCTTGTTTTTGAATCCATCTTCATCTTCAATCGGTTTCTCGTTTCTTCGTTCTAGAACGCTATAGAAATTGCATTATTCTGATGATGATTATTTGGAACTTTGAGTATTGCCTTATTCTGGCTTAACGATTCTGTTTTACATCGATAGCTATGTAAACATAGATAGCGTGTTTGACTTTCTATACTGAGTCATTTTACTTCTCTTCTTGCAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGGTACGTTGTATTTTTGATGCTGGCCTTTTGTTTTTATGAATTGTGTTACATTTTTGTGCAAAGTTGGAAGTGACTAAGTACCCGAAAGCAAGTTTGTTTTCTAGATTAATCCATTAAGTATGAAATGAAATTCGTTGGACGCGGATTTTTTGTGTGAAATATTCATCTGTTTATGTCATTGTGGAGACCGATAGGATTTAGGCGTCGGATGAGAGGATAATTAAAGCAGATTTCTCTGGTGTTGCGTTTCTACATTTAGGTTATGAGGCATATCATATAGCTTATTGATGATCTACTCTCCTGGTTCTAAGTAATGCCACTTATTGGATTAGGGAACAGTCATTATGAAATTGAAATTTGCGTTAATTGCAGATTGGGAGTCATCATTTCAACGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATATATACCTGGAAGGATGCTACTCTTCGCGAGCTAACTGATCTGGTTGTGTTTCTCATCCCTTTTCAATCATTTCTCCTTGCACGCTTCGCATGACATAATTACGAATGATCTATATCATTTTTAGTTCATGTTTTTTTGTTAAATGCCACACTGTTTACCTTACTGCTGTCCTTGAACTTATGTTGTGAGTTTGTGTGTTTGTTTTTTTTTCGGGGGTGGGGTCACAGGTCAAAGAGGTAGCTCCAGAAGCCAGGAGAAGAAATGCTAAACTATCTTTCGCTTTGGTGTATCCAGATAGACATGGCCGGTTTGTTGTGAGAGAGGTACCTCTCTCCATTTCTGTGCTCTCTTTCTTCCACTCTGACTTGAATGCACACTTTTATTTATGTTTTCAGGATGTTACATTGGAAATATTCATGATCTTTCGCCCTTTTTACTTCGTTGAGTTTCGATTATATGAAATTGAAGATGTAAGTTGATTAGTGGTAAAATCATCAGTTATTACCAAAACTCTGCTAGAAATTACCCAAAACCCATTAATTGTCCTAGAATTCGTCCCACTTAGTACTCAAATCTAGTCTTAACATTACTGGAATTTGACCAGAAAAAAAATTGAATACTTTTAACATGTTCAAGCATCAAGGACCAAACAGCAAACAAACCTAGCCTAGAGAAATGCTTATCTACAAAATCAGTAATGTGTTGAACTACAAGAATGCCATAAATGTCAAAGAGAAAAAGACAACTGAACTAAGGGAGGAGATTGAAGTTATTTATTCTAGTGTTGAATTTGACTAAACTAAATCTGGAAATACAAAATAAATATTTCCCTATTGAGTATTATGTTGACAGATGTTATGTCTACGACTTGTTTGATCGTGACAATACTTTCAAACTGGAGTTTTCCCATAGTCTTAAGAAGTTTGTAGCGCTCAGTTTTGTGAAAAGGTGGGTAGTTCTGATTCTAGGACATGTATGAACACATCGAACGGGCTTAACTAGTGCCTACGTTGCATATTCTTGCGCAGCTGTGATGGATAAGCTGCCCATTTAATTTCATTTAGTGCTTTTAAAGGATCACTTGCTAATTACACGGTTGTTGAATGAAATGACACAAAATCTTCTGTACTAAACACCCTTTCTTCATGCCCTGCCAGTTTGCATTTTCCTTCACTGCAAATACCTCTGTATATCTGCTAGGTGAATCGAATTAGATTGACCTATTTCTTAAAAGAACATAAAGTAATGTACGATTATAAACAAAGGTATGAAGAAAGTGAACTATTATACGAGCCTCCGAGTAATACAGATTCTGTTTCTTTACGTGAAGGTTGGGAAGACATTCTCGTTCGGAAATGGACGATCAGATGATAACTTAGCTTTGGCAGAACTTGGTTTTCAGGTAAAACAAACATGGGTTTTGTTTTTTGCCATCTCATTCCCCTCCTGTATTTTGTCGCGTACTTACGACACTTTTTCCCTGCAGATCGGAGATTACTTGGACGTGGCAATTATATAG

mRNA sequence

ATGCGGCCTCCGGGCCTCGCCTATAAACTGCAGAAGCTTCCAGAAGTAGCAGAAAATACAGACACAGAAATGGCGGGAGAAGCAGAAGCACCGAGGAGAGCTTATGGCGCTCCTCCAAGAGCCCCTCATGCGCCTCCTCGTCCTCGCTTGGAGCCAGTCGATCGCGAGAAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGATTGGGAGTCATCATTTCAACGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATATATACCTGGAAGGATGCTACTCTTCGCGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCAGAAGCCAGGAGAAGAAATGCTAAACTATCTTTCGCTTTGGTGTATCCAGATAGACATGGCCGGTTTGTTGTGAGAGAGGTTGGGAAGACATTCTCGTTCGGAAATGGACGATCAGATGATAACTTAGCTTTGGCAGAACTTGGTTTTCAGATCGGAGATTACTTGGACGTGGCAATTATATAG

Coding sequence (CDS)

ATGCGGCCTCCGGGCCTCGCCTATAAACTGCAGAAGCTTCCAGAAGTAGCAGAAAATACAGACACAGAAATGGCGGGAGAAGCAGAAGCACCGAGGAGAGCTTATGGCGCTCCTCCAAGAGCCCCTCATGCGCCTCCTCGTCCTCGCTTGGAGCCAGTCGATCGCGAGAAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGATTGGGAGTCATCATTTCAACGAAGACTTCGCTGTGAGGGGCAAGGAGCCGAGGGATGAGGTTCAAATATATACCTGGAAGGATGCTACTCTTCGCGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCAGAAGCCAGGAGAAGAAATGCTAAACTATCTTTCGCTTTGGTGTATCCAGATAGACATGGCCGGTTTGTTGTGAGAGAGGTTGGGAAGACATTCTCGTTCGGAAATGGACGATCAGATGATAACTTAGCTTTGGCAGAACTTGGTTTTCAGATCGGAGATTACTTGGACGTGGCAATTATATAG

Protein sequence

MRPPGLAYKLQKLPEVAENTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII

Homology

[Close]

BLAST of Csor.00g255560 vs. ExPASy Swiss-Prot
Match: O64644 (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2g45640 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 8.2e-48
Identity = 100/150 (66.67%), Postives = 116/150 (77.33%), Query Frame = 0


Query: 28  AEAPRRAYGAPPRAP------HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVR 87
           AEA RR  G  P  P        PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 88  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKT 147
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G + VREVG+T
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVGET 121

Query: 148 FSFGNGRS-DDNLALAELGFQIGDYLDVAI 171
            ++ N +  DD+  L+EL F+IGDYLDVAI
Sbjct: 122 MAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of Csor.00g255560 vs. ExPASy Swiss-Prot
Match: Q3T022 (Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.6e-29
Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 51  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 110
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 111 PEARRRNAKLSFALVYPD-RHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVA 170
           PEAR++    +FA+V+ D +   + V+E+G T S G   +DD++ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]

BLAST of Csor.00g255560 vs. ExPASy Swiss-Prot
Match: O00422 (Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.6e-29
Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 51  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 110
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 111 PEARRRNAKLSFALVYPD-RHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVA 170
           PEAR++    +FA+V+ D +   + V+E+G T S G   +DD++ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]

BLAST of Csor.00g255560 vs. ExPASy Swiss-Prot
Match: Q5RDT5 (Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.6e-29
Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 51  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 110
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 111 PEARRRNAKLSFALVYPD-RHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVA 170
           PEAR++    +FA+V+ D +   + V+E+G T S G   +DD++ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]

BLAST of Csor.00g255560 vs. ExPASy Swiss-Prot
Match: O55128 (Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 8.6e-29
Identity = 65/121 (53.72%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 51  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 110
           +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 111 PEARRRNAKLSFALVYPD-RHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVA 170
           PEAR++    +FA+V+ D +   + V+E+G T S G   +DD++ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFMDLKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]

BLAST of Csor.00g255560 vs. NCBI nr
Match: XP_022943948.1 (histone deacetylase complex subunit SAP18-like [Cucurbita moschata] >KAG6597180.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028645.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347 bits (891), Expect = 1.10e-120
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MRPPGLAYKLQKLPEVAENTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP 60
           MRPPGLAYKLQKLPEVAENTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP
Sbjct: 1   MRPPGLAYKLQKLPEVAENTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP 60

Query: 61  LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL 120
           LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL
Sbjct: 61  LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL 120

Query: 121 SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171
           SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII
Sbjct: 121 SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of Csor.00g255560 vs. NCBI nr
Match: XP_022974173.1 (histone deacetylase complex subunit SAP18-like [Cucurbita maxima])

HSP 1 Score: 346 bits (888), Expect = 3.16e-120
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MRPPGLAYKLQKLPEVAENTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP 60
           MRPPGLAYKLQKLPEVA+NTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP
Sbjct: 1   MRPPGLAYKLQKLPEVADNTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP 60

Query: 61  LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL 120
           LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL
Sbjct: 61  LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL 120

Query: 121 SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171
           SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII
Sbjct: 121 SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of Csor.00g255560 vs. NCBI nr
Match: XP_023538738.1 (histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301 bits (772), Expect = 6.96e-103
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83
           MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 143
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120

Query: 144 FGNGRSDDNLALAELGFQIGDYLDVAII 171
           FGNGRSDDNLALAELGFQIGDYLDVAII
Sbjct: 121 FGNGRSDDNLALAELGFQIGDYLDVAII 148

[Close]

BLAST of Csor.00g255560 vs. NCBI nr
Match: XP_022147400.1 (histone deacetylase complex subunit SAP18 [Momordica charantia])

HSP 1 Score: 291 bits (746), Expect = 6.41e-99
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60

Query: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 143
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120

Query: 144 FGNGRSDDNLALAELGFQIGDYLDVAII 171
           FGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 148

[Close]

BLAST of Csor.00g255560 vs. NCBI nr
Match: XP_038879427.1 (histone deacetylase complex subunit SAP18 [Benincasa hispida])

HSP 1 Score: 289 bits (739), Expect = 7.49e-98
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83
           MAGEAEAPRRAYGA PRA HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAFPRASHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 143
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFV+REVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120

Query: 144 FGNGRSDDNLALAELGFQIGDYLDVAII 171
           FGNGR DD+LALAELGFQIGDYLDVAII
Sbjct: 121 FGNGRLDDSLALAELGFQIGDYLDVAII 148

[Close]

BLAST of Csor.00g255560 vs. ExPASy TrEMBL
Match: A0A6J1FXI8 (histone deacetylase complex subunit SAP18-like OS=Cucurbita moschata OX=3662 GN=LOC111448519 PE=3 SV=1)

HSP 1 Score: 347 bits (891), Expect = 5.34e-121
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MRPPGLAYKLQKLPEVAENTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP 60
           MRPPGLAYKLQKLPEVAENTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP
Sbjct: 1   MRPPGLAYKLQKLPEVAENTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP 60

Query: 61  LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL 120
           LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL
Sbjct: 61  LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL 120

Query: 121 SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171
           SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII
Sbjct: 121 SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of Csor.00g255560 vs. ExPASy TrEMBL
Match: A0A6J1IFF7 (histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LOC111472759 PE=3 SV=1)

HSP 1 Score: 346 bits (888), Expect = 1.53e-120
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MRPPGLAYKLQKLPEVAENTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP 60
           MRPPGLAYKLQKLPEVA+NTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP
Sbjct: 1   MRPPGLAYKLQKLPEVADNTDTEMAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCP 60

Query: 61  LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL 120
           LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL
Sbjct: 61  LLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKL 120

Query: 121 SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171
           SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII
Sbjct: 121 SFALVYPDRHGRFVVREVGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of Csor.00g255560 vs. ExPASy TrEMBL
Match: A0A6J1D024 (histone deacetylase complex subunit SAP18 OS=Momordica charantia OX=3673 GN=LOC111016339 PE=3 SV=1)

HSP 1 Score: 291 bits (746), Expect = 3.11e-99
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60

Query: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 143
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120

Query: 144 FGNGRSDDNLALAELGFQIGDYLDVAII 171
           FGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 148

[Close]

BLAST of Csor.00g255560 vs. ExPASy TrEMBL
Match: A0A5D3D2K7 (Histone deacetylase complex subunit SAP18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004240 PE=3 SV=1)

HSP 1 Score: 288 bits (738), Expect = 5.15e-98
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83
           MAGEAEAPRRAYGAPPRA HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 143
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFV+REVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120

Query: 144 FGNGRSDDNLALAELGFQIGDYLDVAII 171
           FGN R DD+LAL ELGFQIGDYLDVAII
Sbjct: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]

BLAST of Csor.00g255560 vs. ExPASy TrEMBL
Match: A0A1S3AVL4 (histone deacetylase complex subunit SAP18 OS=Cucumis melo OX=3656 GN=LOC103483322 PE=3 SV=1)

HSP 1 Score: 288 bits (738), Expect = 5.15e-98
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83
           MAGEAEAPRRAYGAPPRA HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 143
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFV+REVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120

Query: 144 FGNGRSDDNLALAELGFQIGDYLDVAII 171
           FGN R DD+LAL ELGFQIGDYLDVAII
Sbjct: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]

BLAST of Csor.00g255560 vs. TAIR 10
Match: AT2G45640.1 (SIN3 associated polypeptide P18 )

HSP 1 Score: 191.4 bits (485), Expect = 5.9e-49
Identity = 100/150 (66.67%), Postives = 116/150 (77.33%), Query Frame = 0


Query: 28  AEAPRRAYGAPPRAP------HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVR 87
           AEA RR  G  P  P        PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 88  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKT 147
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G + VREVG+T
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVGET 121

Query: 148 FSFGNGRS-DDNLALAELGFQIGDYLDVAI 171
            ++ N +  DD+  L+EL F+IGDYLDVAI
Sbjct: 122 MAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of Csor.00g255560 vs. TAIR 10
Match: AT2G45640.2 (SIN3 associated polypeptide P18 )

HSP 1 Score: 181.4 bits (459), Expect = 6.1e-46
Identity = 97/150 (64.67%), Postives = 113/150 (75.33%), Query Frame = 0


Query: 28  AEAPRRAYGAPPRAP------HAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVR 87
           AEA RR  G  P  P        PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 88  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKT 147
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G +    VG+T
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGY---NVGET 121

Query: 148 FSFGNGRS-DDNLALAELGFQIGDYLDVAI 171
            ++ N +  DD+  L+EL F+IGDYLDVAI
Sbjct: 122 MAYPNRKQPDDSKTLSELPFEIGDYLDVAI 148

The following BLAST results are available for this feature:

BLAST of Csor.00g255560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64644	8.2e-48	66.67	Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2...	[more]
Q3T022	6.6e-29	53.72	Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV...	[more]
O00422	6.6e-29	53.72	Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 ...	[more]
Q5RDT5	6.6e-29	53.72	Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 ...	[more]
O55128	8.6e-29	53.72	Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1...	[more]

BLAST of Csor.00g255560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943948.1	1.10e-120	100.00	histone deacetylase complex subunit SAP18-like [Cucurbita moschata] >KAG6597180....	[more]
XP_022974173.1	3.16e-120	99.42	histone deacetylase complex subunit SAP18-like [Cucurbita maxima]	[more]
XP_023538738.1	6.96e-103	100.00	histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo]	[more]
XP_022147400.1	6.41e-99	95.27	histone deacetylase complex subunit SAP18 [Momordica charantia]	[more]
XP_038879427.1	7.49e-98	96.62	histone deacetylase complex subunit SAP18 [Benincasa hispida]	[more]

BLAST of Csor.00g255560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXI8	5.34e-121	100.00	histone deacetylase complex subunit SAP18-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1IFF7	1.53e-120	99.42	histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1D024	3.11e-99	95.27	histone deacetylase complex subunit SAP18 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A5D3D2K7	5.15e-98	95.95	Histone deacetylase complex subunit SAP18 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3AVL4	5.15e-98	95.95	histone deacetylase complex subunit SAP18 OS=Cucumis melo OX=3656 GN=LOC10348332...	[more]

BLAST of Csor.00g255560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45640.1	5.9e-49	66.67	SIN3 associated polypeptide P18	[more]
AT2G45640.2	6.1e-46	64.67	SIN3 associated polypeptide P18	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010516	Sin3 associated polypeptide p18	PFAM	PF06487	SAP18	coord: 52..170 e-value: 1.5E-38 score: 132.2
IPR010516	Sin3 associated polypeptide p18	PANTHER	PTHR13082	SAP18	coord: 27..171
IPR042534	Sin3 associated polypeptide p18 superfamily	GENE3D	3.10.20.550	ASAP complex, SAP18 subunit	coord: 43..171 e-value: 5.4E-46 score: 157.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	PANTHER	PTHR13082:SF4	DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATED	coord: 27..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g255560.m01	Csor.00g255560.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003714	transcription corepressor activity