
Csor.00g255040 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATAACAGTACCTGGAAAGAATGTTTCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACTCGGAACCAGAATCAGCTCTCTCTTCAAAACGACCATCTGGAAAGCTCAATAGCAAAAACCTCAATCTGGTGGAAGGGAAAGAATTTGATGCAGATGAGAAATATAGATCTGAGCTGATTTCAATTTCCTTCCTCGAGTCGCCACCCGAAATTGGAAGTGTACCCGTCGGCAAACTCAAAGGTTAGCACCTGGACGTTCGTTATCGTAATTGTATACACTCTTATGTAGAAATGATGCTAATCTAAGTGTGTTGTTGCAACCATGGAGCAATGGTGTCCATGTTCTTTGGTTCTGTAACTTAGACCCTCCCACTGGTTGTCTGTACTATCTTTATCTTTTGAAAACTTATTGCCGTGTGAGCCCCAATGAATGAACTTATGAACCCTCGCTACTTAGCTTTATTATTTTACATTTTTGTCACACTCCTAATGTAATATCATAATATGGTGCCTTAAAGATTGTATATACCTTATACATTGTATCTTATAATAGCTTGTATATGAATCTTAGGGATATATATACACACACATATATATATAGTGAGATTTGACATTTAATCTTCAAATTATGTTCAAATTTGCTATTTTATAACATATTTGTTATAGAAATTTTTAGAATTGTCCTTGGGGGAGCCTTATCTATGATTCTTTACGTTTTATATATATATAGATACATATATATACACACACACATATATATATATACATATAATGCAAGGATGGAGAGATAAGACTCAAACTTTCGAACTTTAAGAAAAATAGTAGCTTATCGAACTTTTTAGAGTCGTATATAATATGTGTATGTATTTATATATATATTTAGAGATTTTAACACAATTACAACTTTCGAACTTTAAGAAAAATAGTAGTTTATCGAACTTTTCAGAGTCTATATAATATGTGTATGTATTTATATATATATCTAGAGATTTTAACACAATTACGTAGATTACTTATTATCTCGAACTATTTATTTATTTATTATTGTCAAGAGCTTAACAGAATCAAATTTTATGACTTTGGAAAAGAAATATTTATACCATATTCAAATGACGGTAAAAGTATGAGAATAAAAAAAAAATTAAAATATTATTTTGATATTTGTACTTTTAGTTTATTGTTATTTTATTTTATTTTTTAAAATATTTGGTCTCTTGACCTCACTCTTATAAAATTTTAAAATACGTAGAAGACCCCATAATATTTATTTTATTTATTAAGGTGGATAAAAAATAACTTATTTATTAAAAGTTTAAGGACTAAATTTAAACCTTTAAAAATATAAATATTCGTCATAAAAATGGAAAATATTATCTAACGTTGTAACTGAAGAAATATTTTTCTAAATTTTAATATAAAAAATTAAACCTTATTTAAAAAAGAAAAAGTGATAAAAAGATTAGAAAAAGTCCTAACAATATTAGAATTAGAAATATCGTTTTATCTTGTCCAATGGATGCGCCGCGAAGATATTTAGACAAGCATCAGTGGCGCCCCTCGGCGGGCTCTCAAATTTATCATGAAATTGGCTGTAGACGATCTTTTCCACCGACCTGCACGATACTATATAGTTCTCCGAATCATCAAGTCGATTTGAAGTTTTGGAGCTAAAATGGCCGCAGGAAACTTGATGAGAAGAACCGAGAAGAATGGCTACGGCTGTCGGAAACCGAACGTCCGGCGGATGGTACGTTCCTCAAATGGTGGCCGCCTCTTGTGCCGTCGTCGAATGAATTCCACTGGTTGATTTTGTTCTTGAGGTTAGAGATGCTATGATATGCTAGCTTCTACTATTGTTTATTCGCTCTCATTGCATGTTTTTTAATTTCGTATCGGCATCTCCAAGTGTTCATTGAAATGTCAGCTTACGATGAGTTCATTTCCTGTTAGCTTCTTTTTCCAATCTATTTGGAATCATAGAATTGTTTATTCTTTTTTGTGTGGGTTTGATTCGGAAGAATGAAGTTGTATTGAAACTGATGGATTACGTTTATTATTATGGAGGGAACGAATCACTTAAAATGTTTGTTTATTCCTCTACGTGTTATTGCTTTGTTTTGTTTTCTTCAGATTCGGATGTCATCTGAATATGAATCATGAAAAATTATTCACCATTAACGAAACGAATCTTGTATTAAACAAGACGGACCTAGCGGATCGGTCACAGACATAGGTTCGTAATTTCTGTAACTTCCATGTTTTTCGTTCATTTTAGCTTAGTTTTTACTGCTGGAGTTCCTTTCAAGTCATTCTGGATTTCGTAGGTTATCAATGTAGCTAATTTGATTTGTCATTGAAGTCTGGTTGAACATAATAATGACAATTCTATGGGATATTTGTGGGGAGAACATGAGATGATGCAAATGAAATACCAGTGGGACGTAATTTACTCTCTTCCCTTGTTATGATCAATGATACAGGGGTTTTTTAATTTTCGATTGTTTATGATTTTCACATGACTGTTACTTCAATTTTTTCCCCTTTTGGTTTAAGTTGGTTCCCCGGTCTCCTTATGTGACCTTCCAGTTATCTTTAGATACAAATATATATTTGTTACTTCTCAAAATAGAATTGCAGTATATGAAGCAGGATTAGTACTTAGCGATCATTTAACATTAATTCTTCAGTAGATGTACCATTTTTTGAGGTCGTTTATTCTTGTACAGTTTGAATCATATTCAAATCGATTCATTAGTTCAATGTTTCACATGTTTATACTTCACTCTATTAATAGGACTGGACAAGATATTTTGAAGACCATGCATCTGTTATGGCGTTAGGAGAATATTAGGGAGGTAAAGAGCTAAAATGTAATCTTTTTGTGTTCATTTTTAATTGCTATCTTGTTTGAGCAACATATTTTCCTTTTACTTTCCAGCTTTGAAATGCTGTTGATGGTAATTGTCAGATGTCTTGGCAGTGTATGCACTTTTTTTTTCTCTAACCATGTTTTGTGCAAAATTAAGTGCCAACTAATTGTAATTTACACATCCCATATTCAAAATGATACTTTGTCACGGTGGGACAATCCATTATTTGTTCGATCCTTTGAGCTGGCCTTAGTTGATCTCTTCTTGGTCTAATAGCAATTGGTGATGGTTCACTTCATACAGTTCTTGAACATTCTTCAAGCTAGAGTTAGAGAATTGAAGAAGAGCGGTCATTCTAGTCATGCCACAACAATGGTGCTGCTTCGAAATCCAAATGTCACTAAGTTGGCCCTTGCAACTCTCTGCATCATATTGGGAGAATTAGTGCTGTAA ATGGATATAACAGTACCTGGAAAGAATGTTTCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACTCGGAACCAGAATCAGCTCTCTCTTCAAAACGACCATCTGGAAAGCTCAATAGCAAAAACCTCAATCTGGTGGAAGGGAAAGAATTTGATGCAGATGAGAAATATAGATCTGAGCTGATTTCAATTTCCTTCCTCGAGTCGCCACCCGAAATTGGAAGTGTACCCGTCGGCAAACTCAAAGGAAACTTGATGAGAAGAACCGAGAAGAATGGCTACGGCTGTCGGAAACCGAACGTCCGGCGGATGGAGAATATTAGGGAGTTCTTGAACATTCTTCAAGCTAGAGTTAGAGAATTGAAGAAGAGCGGTCATTCTAGTCATGCCACAACAATGGTGCTGCTTCGAAATCCAAATGTCACTAAGTTGGCCCTTGCAACTCTCTGCATCATATTGGGAGAATTAGTGCTGTAA ATGGATATAACAGTACCTGGAAAGAATGTTTCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATCTCTTACTCGGAACCAGAATCAGCTCTCTCTTCAAAACGACCATCTGGAAAGCTCAATAGCAAAAACCTCAATCTGGTGGAAGGGAAAGAATTTGATGCAGATGAGAAATATAGATCTGAGCTGATTTCAATTTCCTTCCTCGAGTCGCCACCCGAAATTGGAAGTGTACCCGTCGGCAAACTCAAAGGAAACTTGATGAGAAGAACCGAGAAGAATGGCTACGGCTGTCGGAAACCGAACGTCCGGCGGATGGAGAATATTAGGGAGTTCTTGAACATTCTTCAAGCTAGAGTTAGAGAATTGAAGAAGAGCGGTCATTCTAGTCATGCCACAACAATGGTGCTGCTTCGAAATCCAAATGTCACTAAGTTGGCCCTTGCAACTCTCTGCATCATATTGGGAGAATTAGTGCTGTAA MDITVPGKNVSEEVTRESLIAISYSEPESALSSKRPSGKLNSKNLNLVEGKEFDADEKYRSELISISFLESPPEIGSVPVGKLKGNLMRRTEKNGYGCRKPNVRRMENIREFLNILQARVRELKKSGHSSHATTMVLLRNPNVTKLALATLCIILGELVL Homology
BLAST of Csor.00g255040 vs. ExPASy Swiss-Prot
Match: O82497 (DAR GTPase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DGP2 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.6e-05 Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of Csor.00g255040 vs. NCBI nr
Match: KAG6597232.1 (DAR GTPase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 305 bits (782), Expect = 2.01e-104 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of Csor.00g255040 vs. NCBI nr
Match: XP_022963288.1 (uncharacterized protein LOC111463263 [Cucurbita moschata]) HSP 1 Score: 163 bits (413), Expect = 6.19e-49 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Csor.00g255040 vs. NCBI nr
Match: XP_022974968.1 (uncharacterized protein LOC111473815 [Cucurbita maxima]) HSP 1 Score: 162 bits (410), Expect = 1.77e-48 Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Csor.00g255040 vs. NCBI nr
Match: KAG7028703.1 (DAR GTPase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 133 bits (334), Expect = 2.22e-37 Identity = 71/76 (93.42%), Postives = 71/76 (93.42%), Query Frame = 0
BLAST of Csor.00g255040 vs. NCBI nr
Match: KAA0049081.1 (hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa] >TYK17482.1 hypothetical protein E5676_scaffold434G003470 [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (293), Expect = 5.73e-31 Identity = 63/88 (71.59%), Postives = 72/88 (81.82%), Query Frame = 0
BLAST of Csor.00g255040 vs. ExPASy TrEMBL
Match: A0A6J1HHB9 (uncharacterized protein LOC111463263 OS=Cucurbita moschata OX=3662 GN=LOC111463263 PE=4 SV=1) HSP 1 Score: 163 bits (413), Expect = 2.99e-49 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Csor.00g255040 vs. ExPASy TrEMBL
Match: A0A6J1IHW2 (uncharacterized protein LOC111473815 OS=Cucurbita maxima OX=3661 GN=LOC111473815 PE=4 SV=1) HSP 1 Score: 162 bits (410), Expect = 8.56e-49 Identity = 84/85 (98.82%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Csor.00g255040 vs. ExPASy TrEMBL
Match: A0A5A7U641 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003470 PE=4 SV=1) HSP 1 Score: 117 bits (293), Expect = 2.78e-31 Identity = 63/88 (71.59%), Postives = 72/88 (81.82%), Query Frame = 0
BLAST of Csor.00g255040 vs. ExPASy TrEMBL
Match: A0A0A0L967 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127140 PE=4 SV=1) HSP 1 Score: 114 bits (286), Expect = 3.59e-30 Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of Csor.00g255040 vs. ExPASy TrEMBL
Match: A0A803NHX1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.57e-18 Identity = 49/84 (58.33%), Postives = 62/84 (73.81%), Query Frame = 0
BLAST of Csor.00g255040 vs. TAIR 10
Match: AT4G10650.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 49.7 bits (117), Expect = 2.6e-06 Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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