Csor.00g243160 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g243160
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr16: 2370907 .. 2371167 (-)
RNA-Seq ExpressionCsor.00g243160
SyntenyCsor.00g243160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGCCGCCAGTTGTGCAGCTTCGAGATATAAAGAAATTTCAAGCGAGCGCATCAGCGATCCCAACTTTTCAAAAGAAATGGAAATCCACTGCAGCGGATTGAGAATGATGAAGGAAAAATTCCCGAGACGCCAAAGCTTTGCTTGGACAAAGCATTGGACATATTCTTCATATATCACCATCAAGACATTCCATTCCCATCAAAACAGAATGAATTTTGTTCTAAAGATTGTGACGCCATCTCAAGAACCAGGATAA

mRNA sequence

ATGACTGCCGCCAGTTGTGCAGCTTCGAGATATAAAGAAATTTCAAGCGAGCGCATCAGCGATCCCAACTTTTCAAAAGAAATGGAAATCCACTGCAGCGGATTGAGAATGATGAAGGAAAAATTCCCGAGACGCCAAAGCTTTGCTTGGACAAAGCATTGGACATATTCTTCATATATCACCATCAAGACATTCCATTCCCATCAAAACAGAATGAATTTTGTTCTAAAGATTGTGACGCCATCTCAAGAACCAGGATAA

Coding sequence (CDS)

ATGACTGCCGCCAGTTGTGCAGCTTCGAGATATAAAGAAATTTCAAGCGAGCGCATCAGCGATCCCAACTTTTCAAAAGAAATGGAAATCCACTGCAGCGGATTGAGAATGATGAAGGAAAAATTCCCGAGACGCCAAAGCTTTGCTTGGACAAAGCATTGGACATATTCTTCATATATCACCATCAAGACATTCCATTCCCATCAAAACAGAATGAATTTTGTTCTAAAGATTGTGACGCCATCTCAAGAACCAGGATAA

Protein sequence

MTAASCAASRYKEISSERISDPNFSKEMEIHCSGLRMMKEKFPRRQSFAWTKHWTYSSYITIKTFHSHQNRMNFVLKIVTPSQEPG
Homology
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BLAST of Csor.00g243160 vs. NCBI nr
Match: KAG6577063.1 (hypothetical protein SDJN03_24637, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 178 bits (452), Expect = 1.82e-56
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MTAASCAASRYKEISSERISDPNFSKEMEIHCSGLRMMKEKFPRRQSFAWTKHWTYSSYI 60
          MTAASCAASRYKEISSERISDPNFSKEMEIHCSGLRMMKEKFPRRQSFAWTKHWTYSSYI
Sbjct: 1  MTAASCAASRYKEISSERISDPNFSKEMEIHCSGLRMMKEKFPRRQSFAWTKHWTYSSYI 60

Query: 61 TIKTFHSHQNRMNFVLKIVTPSQEPG 86
          TIKTFHSHQNRMNFVLKIVTPSQEPG
Sbjct: 61 TIKTFHSHQNRMNFVLKIVTPSQEPG 86

The following BLAST results are available for this feature:
BLAST of Csor.00g243160 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g243160 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6577063.11.82e-56100.00hypothetical protein SDJN03_24637, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g243160 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g243160 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g243160.m01Csor.00g243160.m01mRNA