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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGCTGTGGGAATCTTTAGCTGCTGGATGGAAGTGTATGTGTATCCAACTTGCCGGTTTCTTGACAATTCAAGTTCTGCTTCCTGTCTTATTGATCATCTCCAGTGGCGAACTTCATCAGAGTGATGGACTTCAACATCCAGAGGAATGCTGCGGAATTATCGTGGCATCGGAATTAATTCGAGGGTAAACTATATTGGTGTAGTGCTGGTGTCACCATGAATGATCCTTCTACCTTCTAATTCAATGGTTTAAGATGCCCAAAATTGATGCCCAAAATTATACCCAGTATGATCGTTTCATTACTATACATGTAACTTATATTTGGCCACTTTTGATGTGTAAATCTTCAAGCTACGTGCCAGCCCATAGCTCAGCGCAATGACAAGTTCTTTTAGTTTTTGTCTTACAGCTGGGGGGTATTACGACAGGTTTGCTAAGTGTTCCGGCATAGAGCGAACCGGTGATGCCATTTAAGTGTCTAGTATGATGTGAAGTTGAAAATTGAATTACTTTAGGATTGTGTCGTTTTCATTGTTCAGCAGCATACTCAAGTGGAATGCTTTTGGTGACAGGGGAAGATTCAATGGATCTTGGTCCTTATGATATCACTTGATCTAACATATAGTAGAAATTGGATGAAGTTTTGGAGATTTAATTGACGTATAGAAGATTTGCTTCGTTGTGTTTAATAGTGAGCTTGTTTCTTTATTTGTTTGTTTGTTTGTTTTACTTCATCGTTTTGTTGCAGGGAGGAGACCAGTAACTATCTTTCCTATAATATTGGGTATACGATTAAGCGTGTATATAGATTTTTCTCTTTTCATTGCTATCTTTGCAAATTGCCGATTCTTTTGATTTCGTTTTCAATTATTATTTTATAAATCTACCATTGTGTGGAGAATAAAACTTCATGTGACGTTCCATGCAGTGTCATTGGAAGATTTATGTTGTATTTCTTATCGAGTTTCAATGCGTAGGTTGGAAATAACAATTTTCTGCAGGTCTTTTTGGTCACTGTGAAAGTTTAGAATCTCGATGACAGAAAGTTCAAAATATCGTTATTGAGACAAAATATGAGAATTGAAAATCATTGTTATTGTCTCAAGATATAAAATTTTAGTTCCTTTACTAGCAAACAGCCTTTGATTTTGAGAATTGATGTTGTAGAGTTGATATGCGAGAAAGCATCAATAGCCTGCTTCATTGGTTATGGGCATAGTAGGTATAGACCCTGTAACTAAAAGGCAATGATTTTTTTTTTTCTTTTCAGTTTAGATAACCCTGTTTATGTATATGCAATTAAAATTAAGATTCTAGTCTCTAAGATGTTCACTATTTCATGTCCATTTCAGGTATCTCCAAAGTTCATTAGCCATAGGCTCATTTCGCCATGGATATAGATCTTAG mRNA sequence ATGCTGTGGGAATCTTTAGCTGCTGGATGGAAGTGTATGTGTATCCAACTTGCCGGTTTCTTGACAATTCAAGTTCTGCTTCCTGTCTTATTGATCATCTCCAGTGGCGAACTTCATCAGAGTGATGGACTTCAACATCCAGAGGAATGCTGCGGAATTATCGTGGCATCGGAATTAATTCGAGGCAAACAGCCTTTGATTTTGAGAATTGATGTTGTAGAGTTGATATGCGAGAAAGCATCAATAGCCTGCTTCATTGGTTATGGGCATAGTAGGTATCTCCAAAGTTCATTAGCCATAGGCTCATTTCGCCATGGATATAGATCTTAG Coding sequence (CDS) ATGCTGTGGGAATCTTTAGCTGCTGGATGGAAGTGTATGTGTATCCAACTTGCCGGTTTCTTGACAATTCAAGTTCTGCTTCCTGTCTTATTGATCATCTCCAGTGGCGAACTTCATCAGAGTGATGGACTTCAACATCCAGAGGAATGCTGCGGAATTATCGTGGCATCGGAATTAATTCGAGGCAAACAGCCTTTGATTTTGAGAATTGATGTTGTAGAGTTGATATGCGAGAAAGCATCAATAGCCTGCTTCATTGGTTATGGGCATAGTAGGTATCTCCAAAGTTCATTAGCCATAGGCTCATTTCGCCATGGATATAGATCTTAG Protein sequence MLWESLAAGWKCMCIQLAGFLTIQVLLPVLLIISSGELHQSDGLQHPEECCGIIVASELIRGKQPLILRIDVVELICEKASIACFIGYGHSRYLQSSLAIGSFRHGYRS
Homology
BLAST of Csor.00g242860 vs. NCBI nr
Match: KAG6577093.1 (hypothetical protein SDJN03_24667, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219 bits (559), Expect = 4.60e-72 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 Query: 1 MLWESLAAGWKCMCIQLAGFLTIQVLLPVLLIISSGELHQSDGLQHPEECCGIIVASELI 60 MLWESLAAGWKCMCIQLAGFLTIQVLLPVLLIISSGELHQSDGLQHPEECCGIIVASELI Sbjct: 1 MLWESLAAGWKCMCIQLAGFLTIQVLLPVLLIISSGELHQSDGLQHPEECCGIIVASELI 60
Query: 61 RGKQPLILRIDVVELICEKASIACFIGYGHSRYLQSSLAIGSFRHGYRS 109 RGKQPLILRIDVVELICEKASIACFIGYGHSRYLQSSLAIGSFRHGYRS Sbjct: 61 RGKQPLILRIDVVELICEKASIACFIGYGHSRYLQSSLAIGSFRHGYRS 109
BLAST of Csor.00g242860 vs. NCBI nr
Match: KAG7015098.1 (Protein FAR-RED IMPAIRED RESPONSE 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 128 bits (321), Expect = 1.23e-31 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 Query: 1 MLWESLAAGWKCMCIQLAGFLTIQVLLPVLLIISSGELHQSDGLQHPEECCGIIVASELI 60 MLWESLAAGWKCMCIQLAGFLTIQVLLPVLLIISSGELHQSDGLQHPEECCGIIVASELI Sbjct: 1 MLWESLAAGWKCMCIQLAGFLTIQVLLPVLLIISSGELHQSDGLQHPEECCGIIVASELI 60
Query: 61 RG 62 RG Sbjct: 61 RG 62
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6577093.1 | 4.60e-72 | 100.00 | hypothetical protein SDJN03_24667, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7015098.1 | 1.23e-31 | 100.00 | Protein FAR-RED IMPAIRED RESPONSE 1 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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