Csor.00g239880 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g239880
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	non-classical arabinogalactan protein 30
Location	Csor_Chr04: 673139 .. 673639 (+)
RNA-Seq Expression	Csor.00g239880
Synteny	Csor.00g239880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCAAAAGCCTCCTCTCCCTCTCCCTCCTCCTCCTCCTCCTCCACATCGCCGCCGCAAACCCACCCCGACCCACCCCCAAGCCAGTGGCTATCGCCGTGGAGGGCATGGTGTACTGCCAAAACTGCCAGAAAATCGGAAGCTGGTCGCTGACAGGCGCGAAGCCGATCGCCGGTGCTAAAATCAGCGTGATTTGCAAGAATCACAACAACCAAGTGAGCTTCTACAAGGTGTACGAAACCAACAAATATGGGTATTTTTACGCCGAGTTAGTGGGCTACAAAATGCCCCACCCGGTTCTTGACCACCCGCTGCAAGCCTGCAAAGTCAAGCCCATTTCTTCTCCTCTGTCCGACTGTGACCTTCTCACCAATCTCAACTACGGCATTGCCGGAGCGCCGCTCCGATACGACAAGAAGTTCGTCGTCGGCCCCAAGTATCGGGCGGCGGTTTACTCCGCCGGGCCGTTGGCTTTCCACCCTGAAAAATGTCTCTAG

mRNA sequence

ATGGCAGCCAAAAGCCTCCTCTCCCTCTCCCTCCTCCTCCTCCTCCTCCACATCGCCGCCGCAAACCCACCCCGACCCACCCCCAAGCCAGTGGCTATCGCCGTGGAGGGCATGGTGTACTGCCAAAACTGCCAGAAAATCGGAAGCTGGTCGCTGACAGGCGCGAAGCCGATCGCCGGTGCTAAAATCAGCGTGATTTGCAAGAATCACAACAACCAAGTGAGCTTCTACAAGGTGTACGAAACCAACAAATATGGGTATTTTTACGCCGAGTTAGTGGGCTACAAAATGCCCCACCCGGTTCTTGACCACCCGCTGCAAGCCTGCAAAGTCAAGCCCATTTCTTCTCCTCTGTCCGACTGTGACCTTCTCACCAATCTCAACTACGGCATTGCCGGAGCGCCGCTCCGATACGACAAGAAGTTCGTCGTCGGCCCCAAGTATCGGGCGGCGGTTTACTCCGCCGGGCCGTTGGCTTTCCACCCTGAAAAATGTCTCTAG

Coding sequence (CDS)

ATGGCAGCCAAAAGCCTCCTCTCCCTCTCCCTCCTCCTCCTCCTCCTCCACATCGCCGCCGCAAACCCACCCCGACCCACCCCCAAGCCAGTGGCTATCGCCGTGGAGGGCATGGTGTACTGCCAAAACTGCCAGAAAATCGGAAGCTGGTCGCTGACAGGCGCGAAGCCGATCGCCGGTGCTAAAATCAGCGTGATTTGCAAGAATCACAACAACCAAGTGAGCTTCTACAAGGTGTACGAAACCAACAAATATGGGTATTTTTACGCCGAGTTAGTGGGCTACAAAATGCCCCACCCGGTTCTTGACCACCCGCTGCAAGCCTGCAAAGTCAAGCCCATTTCTTCTCCTCTGTCCGACTGTGACCTTCTCACCAATCTCAACTACGGCATTGCCGGAGCGCCGCTCCGATACGACAAGAAGTTCGTCGTCGGCCCCAAGTATCGGGCGGCGGTTTACTCCGCCGGGCCGTTGGCTTTCCACCCTGAAAAATGTCTCTAG

Protein sequence

MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL

Homology

[Close]

BLAST of Csor.00g239880 vs. ExPASy Swiss-Prot
Match: P93013 (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP30 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12
Identity = 46/146 (31.51%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 23  PPRPTPK--PVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVY 82
           PP   PK     +AV G+VYC+ C+  G  ++ GAKP+  A + ++CKN  N +S  K  
Sbjct: 98  PPVYPPKYNKTLVAVRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKKNSISETK-- 157

Query: 83  ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDK 142
            T+K GYF         P  V ++ ++ C+   + SP + C  +++L+ G  G+ L+   
Sbjct: 158 -TDKNGYFM-----LLAPKTVTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVL 217

Query: 143 K----FVVGPKYRAAVYSAGPLAFHP 163
           K      +   ++ +VY+ GP AF P
Sbjct: 218 KPGFSSTIMRWFKYSVYNVGPFAFEP 235

[Close]

BLAST of Csor.00g239880 vs. ExPASy Swiss-Prot
Match: Q9FZA2 (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-11
Identity = 48/146 (32.88%), Postives = 71/146 (48.63%), Query Frame = 0


Query: 23  PPRPTPK--PVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVY 82
           PP   PK     +AV G VYC++C+     +L GAKPI GA + ++CK+  N  +     
Sbjct: 218 PPVYPPKFNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNITA---ET 277

Query: 83  ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDK 142
            T+K GYF         P  V +   + C+V  + S    C  ++ L  G  GA L+ +K
Sbjct: 278 TTDKNGYFL-----LLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEK 337

Query: 143 KF----VVGPKYRAAVYSAGPLAFHP 163
           K     VV  K    +++ GP AF+P
Sbjct: 338 KLGKSTVVVNKLVYGLFNVGPFAFNP 355

[Close]

BLAST of Csor.00g239880 vs. ExPASy Swiss-Prot
Match: O81417 (Protein SEED AND ROOT HAIR PROTECTIVE PROTEIN OS=Arabidopsis thaliana OX=3702 GN=SRPP PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.8e-05
Identity = 49/172 (28.49%), Postives = 74/172 (43.02%), Query Frame = 0


Query: 3   AKSLLSLSLLLLLLHIAAANPPRP-TPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGA 62
           A SL+  S L++       N   P T K + IAVEG++ C++  K          PI GA
Sbjct: 9   AASLIVFSSLIISSVAYYGNEADPETGKLIPIAVEGIIKCKSGGK--------TYPIQGA 68

Query: 63  KISVICKN---HNNQVSFYKVY--ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISS 122
              + C     + N++    +   +T+  GYF A +   ++        +  CK     S
Sbjct: 69  TARIACVKVDAYGNELVPISILSSKTDAKGYFIATIFPSQLR---AGRTVTKCKTYLYKS 128

Query: 123 PLSDCDLLTNLNYGIAGAPLR-----YDKKFVVGPKYRAAVYSAGPLAFHPE 164
           PL+DCD  T++N G+ G PL       DK F         +Y AGP  +  E
Sbjct: 129 PLADCDFPTDVNKGVRGQPLSTYRILQDKSF--------KLYWAGPFFYTSE 161

[Close]

BLAST of Csor.00g239880 vs. NCBI nr
Match: KAG6599980.1 (Non-classical arabinogalactan protein 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030660.1 Non-classical arabinogalactan protein 30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342 bits (876), Expect = 1.46e-118
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60
           MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG
Sbjct: 1   MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60

Query: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120
           AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD
Sbjct: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120

Query: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166
           CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL
Sbjct: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166

[Close]

BLAST of Csor.00g239880 vs. NCBI nr
Match: XP_023541968.1 (non-classical arabinogalactan protein 30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340 bits (871), Expect = 8.46e-118
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60
           MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG
Sbjct: 1   MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60

Query: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120
           AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPL D
Sbjct: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLPD 120

Query: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166
           CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL
Sbjct: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166

[Close]

BLAST of Csor.00g239880 vs. NCBI nr
Match: XP_022942759.1 (non-classical arabinogalactan protein 30 [Cucurbita moschata])

HSP 1 Score: 340 bits (871), Expect = 2.70e-117
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60
           M AKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG
Sbjct: 34  MEAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 93

Query: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120
           AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD
Sbjct: 94  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 153

Query: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166
           CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL
Sbjct: 154 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 199

[Close]

BLAST of Csor.00g239880 vs. NCBI nr
Match: XP_022996537.1 (non-classical arabinogalactan protein 30 [Cucurbita maxima])

HSP 1 Score: 337 bits (863), Expect = 4.47e-116
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60
           MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAK IAG
Sbjct: 34  MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKAIAG 93

Query: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120
           AKISVICKNHNNQVSFYKVYET+KYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD
Sbjct: 94  AKISVICKNHNNQVSFYKVYETDKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 153

Query: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166
           CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL
Sbjct: 154 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 199

[Close]

BLAST of Csor.00g239880 vs. NCBI nr
Match: XP_038893345.1 (non-classical arabinogalactan protein 30 [Benincasa hispida])

HSP 1 Score: 285 bits (730), Expect = 2.67e-96
Identity = 135/166 (81.33%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60
           M+AK+LLSLSLLLLLL IAAA+  RP  KP+++A+EG+VYCQ+CQK+G+WSL+GAK I+G
Sbjct: 1   MSAKNLLSLSLLLLLLCIAAADTTRPAYKPISVAIEGLVYCQSCQKLGTWSLSGAKAISG 60

Query: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120
           AKISVICKNHNNQV+FYKVYETNK GYFYAELVGYKM HPVLDHPLQACKVKP+ SPLSD
Sbjct: 61  AKISVICKNHNNQVNFYKVYETNKDGYFYAELVGYKMNHPVLDHPLQACKVKPVYSPLSD 120

Query: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166
           C+LLTNLNYG+ GAPLRY+KK VVGP YRAAVY+AGPLAFHPEKCL
Sbjct: 121 CNLLTNLNYGLVGAPLRYEKKLVVGPHYRAAVYAAGPLAFHPEKCL 166

[Close]

BLAST of Csor.00g239880 vs. ExPASy TrEMBL
Match: A0A6J1FS98 (non-classical arabinogalactan protein 30 OS=Cucurbita moschata OX=3662 GN=LOC111447700 PE=4 SV=1)

HSP 1 Score: 340 bits (871), Expect = 1.31e-117
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60
           M AKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG
Sbjct: 34  MEAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 93

Query: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120
           AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD
Sbjct: 94  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 153

Query: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166
           CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL
Sbjct: 154 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 199

[Close]

BLAST of Csor.00g239880 vs. ExPASy TrEMBL
Match: A0A6J1K278 (non-classical arabinogalactan protein 30 OS=Cucurbita maxima OX=3661 GN=LOC111491753 PE=4 SV=1)

HSP 1 Score: 337 bits (863), Expect = 2.16e-116
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60
           MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAK IAG
Sbjct: 34  MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKAIAG 93

Query: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120
           AKISVICKNHNNQVSFYKVYET+KYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD
Sbjct: 94  AKISVICKNHNNQVSFYKVYETDKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 153

Query: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166
           CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL
Sbjct: 154 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 199

[Close]

BLAST of Csor.00g239880 vs. ExPASy TrEMBL
Match: A0A1S3BZJ5 (non-classical arabinogalactan protein 30 OS=Cucumis melo OX=3656 GN=LOC103495126 PE=4 SV=1)

HSP 1 Score: 283 bits (724), Expect = 1.10e-95
Identity = 134/167 (80.24%), Postives = 155/167 (92.81%), Query Frame = 0


Query: 1   MAAKSLLSLS-LLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIA 60
           M+ K+LLSLS LLLLLLHIA+ANP RP  KP+++AVEG+VYCQNC+K+G+WSLT AKPI+
Sbjct: 1   MSTKNLLSLSFLLLLLLHIASANPVRPPHKPLSVAVEGLVYCQNCKKVGTWSLTEAKPIS 60

Query: 61  GAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLS 120
           GAKISVICKNHN+QV FYKVY+TNK GYFYAELVGY+M HPVLDHPLQACKVKP+SSPLS
Sbjct: 61  GAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLS 120

Query: 121 DCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166
           DC+LLTNLNYG+ GAPLRY+KKFV+G  YRAAVY+AGPLAFHP+KCL
Sbjct: 121 DCNLLTNLNYGLTGAPLRYEKKFVLGHNYRAAVYAAGPLAFHPQKCL 167

[Close]

BLAST of Csor.00g239880 vs. ExPASy TrEMBL
Match: A0A0A0KP60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G211030 PE=4 SV=1)

HSP 1 Score: 280 bits (715), Expect = 2.50e-94
Identity = 131/166 (78.92%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MAAKSLLSLSLLLLLLHIAAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAG 60
           M+ K+LLSLS LLLLLHIA+A+P R   KP+++A+EG+VYCQNC+KIG+WSLT AKPI+G
Sbjct: 1   MSTKNLLSLSFLLLLLHIASADPVRLPHKPLSMAIEGLVYCQNCKKIGTWSLTEAKPISG 60

Query: 61  AKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSD 120
           AKISVICKNHN+QV FYKVY+TNK GYFYAELVGY+M HPVLDHPLQACKVKP+SSPLSD
Sbjct: 61  AKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSD 120

Query: 121 CDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKCL 166
           C+LLTNLNYG+ GAPLR++KKFVVG  YRAAVY+AGPLAFHP+KCL
Sbjct: 121 CNLLTNLNYGLTGAPLRFEKKFVVGTNYRAAVYAAGPLAFHPQKCL 166

[Close]

BLAST of Csor.00g239880 vs. ExPASy TrEMBL
Match: A0A6J1CYI2 (non-classical arabinogalactan protein 30 OS=Momordica charantia OX=3673 GN=LOC111015957 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 6.32e-79
Identity = 117/166 (70.48%), Postives = 137/166 (82.53%), Query Frame = 0


Query: 1   MAAKSLLSLSLLLLLLHI-AAANPPRPTPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIA 60
           M A++LLSL +LLL +   AAA+P R   KPV I VEG+V+CQNC++IGSWSLT  K IA
Sbjct: 1   MTARNLLSLLVLLLCVFAGAAADPTRHAHKPVEIVVEGVVFCQNCRRIGSWSLTDGKVIA 60

Query: 61  GAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLS 120
           GAK+SVICKN +NQV+FYKVY+T+  GYFYAELVGYKM HPVLDHPLQ CKVK +SSPL 
Sbjct: 61  GAKVSVICKNLHNQVNFYKVYQTDAKGYFYAELVGYKMTHPVLDHPLQTCKVKLVSSPLP 120

Query: 121 DCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKC 165
           +CD LTN+NYG+AGAPLRY+ K V G  YRA VY+AGPLAFHPEKC
Sbjct: 121 ECDRLTNVNYGLAGAPLRYENKIVAGKNYRATVYAAGPLAFHPEKC 166

[Close]

BLAST of Csor.00g239880 vs. TAIR 10
Match: AT5G05500.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 188.7 bits (478), Expect = 3.7e-48
Identity = 92/170 (54.12%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 7   LSLSLLLLLLHIA----AANPPRPTP-------KPVAIAVEGMVYCQNCQKIGSWSLTGA 66
           L  S+L++L+  A    A  PP P P       K V  AVEGMVYCQ+C K GSWSL GA
Sbjct: 6   LPFSVLVILIATAVLANAYTPPPPPPTTAYPAVKTVEAAVEGMVYCQSCDKFGSWSLAGA 65

Query: 67  KPIAGAKISVICKNHNNQVSFYKVYETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPIS 126
           + IAGAKIS+ICKNH  QVSFYKV+ T+ YG+FY EL G+KM    LDHPL +C+ K +S
Sbjct: 66  EAIAGAKISIICKNHRQQVSFYKVFRTDSYGHFYGELKGFKMTPHFLDHPLHSCRAKLVS 125

Query: 127 SPLSDCDLLTNLNYGIAGAPLRYDKKFVVGPKYRAAVYSAGPLAFHPEKC 166
           SP  DC+L +N+N  + GAPLRY++K +    Y A +Y+AGPLAF P+ C
Sbjct: 126 SPREDCNLFSNINNALDGAPLRYEEKRLKWTNYEAVIYAAGPLAFRPDHC 175

[Close]

BLAST of Csor.00g239880 vs. TAIR 10
Match: AT2G33790.1 (arabinogalactan protein 30 )

HSP 1 Score: 74.7 bits (182), Expect = 7.8e-14
Identity = 46/146 (31.51%), Postives = 76/146 (52.05%), Query Frame = 0


Query: 23  PPRPTPK--PVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVY 82
           PP   PK     +AV G+VYC+ C+  G  ++ GAKP+  A + ++CKN  N +S  K  
Sbjct: 98  PPVYPPKYNKTLVAVRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKKNSISETK-- 157

Query: 83  ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDK 142
            T+K GYF         P  V ++ ++ C+   + SP + C  +++L+ G  G+ L+   
Sbjct: 158 -TDKNGYFM-----LLAPKTVTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVL 217

Query: 143 K----FVVGPKYRAAVYSAGPLAFHP 163
           K      +   ++ +VY+ GP AF P
Sbjct: 218 KPGFSSTIMRWFKYSVYNVGPFAFEP 235

[Close]

BLAST of Csor.00g239880 vs. TAIR 10
Match: AT1G28290.1 (arabinogalactan protein 31 )

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-12
Identity = 48/146 (32.88%), Postives = 71/146 (48.63%), Query Frame = 0


Query: 23  PPRPTPK--PVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVY 82
           PP   PK     +AV G VYC++C+     +L GAKPI GA + ++CK+  N  +     
Sbjct: 218 PPVYPPKFNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNITA---ET 277

Query: 83  ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDK 142
            T+K GYF         P  V +   + C+V  + S    C  ++ L  G  GA L+ +K
Sbjct: 278 TTDKNGYFL-----LLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEK 337

Query: 143 KF----VVGPKYRAAVYSAGPLAFHP 163
           K     VV  K    +++ GP AF+P
Sbjct: 338 KLGKSTVVVNKLVYGLFNVGPFAFNP 355

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BLAST of Csor.00g239880 vs. TAIR 10
Match: AT1G28290.2 (arabinogalactan protein 31 )

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-12
Identity = 48/146 (32.88%), Postives = 71/146 (48.63%), Query Frame = 0


Query: 23  PPRPTPK--PVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGAKISVICKNHNNQVSFYKVY 82
           PP   PK     +AV G VYC++C+     +L GAKPI GA + ++CK+  N  +     
Sbjct: 174 PPVYPPKFNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNITA---ET 233

Query: 83  ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISSPLSDCDLLTNLNYGIAGAPLRYDK 142
            T+K GYF         P  V +   + C+V  + S    C  ++ L  G  GA L+ +K
Sbjct: 234 TTDKNGYFL-----LLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEK 293

Query: 143 KF----VVGPKYRAAVYSAGPLAFHP 163
           K     VV  K    +++ GP AF+P
Sbjct: 294 KLGKSTVVVNKLVYGLFNVGPFAFNP 311

[Close]

BLAST of Csor.00g239880 vs. TAIR 10
Match: AT4G02270.1 (root hair specific 13 )

HSP 1 Score: 49.7 bits (117), Expect = 2.7e-06
Identity = 49/172 (28.49%), Postives = 74/172 (43.02%), Query Frame = 0


Query: 3   AKSLLSLSLLLLLLHIAAANPPRP-TPKPVAIAVEGMVYCQNCQKIGSWSLTGAKPIAGA 62
           A SL+  S L++       N   P T K + IAVEG++ C++  K          PI GA
Sbjct: 9   AASLIVFSSLIISSVAYYGNEADPETGKLIPIAVEGIIKCKSGGK--------TYPIQGA 68

Query: 63  KISVICKN---HNNQVSFYKVY--ETNKYGYFYAELVGYKMPHPVLDHPLQACKVKPISS 122
              + C     + N++    +   +T+  GYF A +   ++        +  CK     S
Sbjct: 69  TARIACVKVDAYGNELVPISILSSKTDAKGYFIATIFPSQLR---AGRTVTKCKTYLYKS 128

Query: 123 PLSDCDLLTNLNYGIAGAPLR-----YDKKFVVGPKYRAAVYSAGPLAFHPE 164
           PL+DCD  T++N G+ G PL       DK F         +Y AGP  +  E
Sbjct: 129 PLADCDFPTDVNKGVRGQPLSTYRILQDKSF--------KLYWAGPFFYTSE 161

The following BLAST results are available for this feature:

BLAST of Csor.00g239880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93013	1.1e-12	31.51	Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP3...	[more]
Q9FZA2	3.5e-11	32.88	Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP3...	[more]
O81417	3.8e-05	28.49	Protein SEED AND ROOT HAIR PROTECTIVE PROTEIN OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Csor.00g239880 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599980.1	1.46e-118	100.00	Non-classical arabinogalactan protein 30, partial [Cucurbita argyrosperma subsp....	[more]
XP_023541968.1	8.46e-118	99.40	non-classical arabinogalactan protein 30 [Cucurbita pepo subsp. pepo]	[more]
XP_022942759.1	2.70e-117	99.40	non-classical arabinogalactan protein 30 [Cucurbita moschata]	[more]
XP_022996537.1	4.47e-116	98.80	non-classical arabinogalactan protein 30 [Cucurbita maxima]	[more]
XP_038893345.1	2.67e-96	81.33	non-classical arabinogalactan protein 30 [Benincasa hispida]	[more]

BLAST of Csor.00g239880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FS98	1.31e-117	99.40	non-classical arabinogalactan protein 30 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1K278	2.16e-116	98.80	non-classical arabinogalactan protein 30 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A1S3BZJ5	1.10e-95	80.24	non-classical arabinogalactan protein 30 OS=Cucumis melo OX=3656 GN=LOC103495126...	[more]
A0A0A0KP60	2.50e-94	78.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G211030 PE=4 SV=1	[more]
A0A6J1CYI2	6.32e-79	70.48	non-classical arabinogalactan protein 30 OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Csor.00g239880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05500.1	3.7e-48	54.12	Pollen Ole e 1 allergen and extensin family protein	[more]
AT2G33790.1	7.8e-14	31.51	arabinogalactan protein 30	[more]
AT1G28290.1	2.5e-12	32.88	arabinogalactan protein 31	[more]
AT1G28290.2	2.5e-12	32.88	arabinogalactan protein 31	[more]
AT4G02270.1	2.7e-06	28.49	root hair specific 13	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_1	coord: 35..133 e-value: 1.2E-26 score: 93.0
None	No IPR available	PANTHER	PTHR33470	OS01G0164075 PROTEIN	coord: 9..165
None	No IPR available	PANTHER	PTHR33470:SF37	NON-CLASSICAL ARABINOGALACTAN PROTEIN 30-LIKE	coord: 9..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g239880.m01	Csor.00g239880.m01	mRNA