Csor.00g216230 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g216230
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ribosomal protein
Location	Csor_Chr10: 2633919 .. 2638554 (-)
RNA-Seq Expression	Csor.00g216230
Synteny	Csor.00g216230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTACGTGCTTCAGTGAAGAAGATGTGCGAGTTTTGTAGGACAGTGAAGCGTCGAGGTCGAGTGTATGTATACTGCTCATCCAATCCCAAACACAAGCAACGCCAAGGCCTATCAACATCTGCTAGTGAAGGACCTTCTCCCCACCTGTGAGTACTTCCCCATTGTCAGTTCTTAGTCTTTGAATGCATATTTCATTCGTTTATCTGTTAAGATGGAAAAGTTTGAAGAATTATGCCTTTTGCCATTGAAGAGAGTTGTTGCATAACTCAAGATAAGGATTGACGATTTATTACATAGGGGGCATTGCATGAATGTGTTAGGGACACATACCTCCGTAATGGTATGATATTACCCATTTTGAGTATAAACTCTCATTGTATTACTTTTGGTTTTCCCAAAATGTCTCATACCAATGGAGATGTATTCCTTACTTATAAACTCACGATCATCCTCTTAATTAATCAATGTGGGACTCCCTCGAACAAAATACACCATAGAGCCTCTTTTGAGGCCTACGAAGCCCTCAAATAACTTCTCCTTAATTGAGGTTCGACTTCTTCTCTAGAGCCCTTGACCAAAATACACCCTTTGTTCGACACTTGAGTTACTTTTGACTACACATTTGAGGCTCACAACTTTTTTGTTCGACACTCGAGGATTTTGTTGAAATGACTAAGTTAAGGGTATGACTTTGATACCATGTTAGGAACCACAAACCTCTACAATGGTATAATATTGCCTACTTTGAGCATAAGGTCTCATGCCAATAGAAATATATTTTTTACTTATAAACCCATGATCATTCTCTTAATTAGCAAATGTGAGACTCCCTCCCAACCATCGTCAACAGAAGAATTGAGTTATGCACTTGTGTAAAACAAAAATGGACATAACTCCTGCATCAAATTGTAGAACTTTTGCTATTTCTTGAGTGCCAAAAAGTATGTTATTTTTTATTTTCGTATAAAGATGATGTTGAGGCCAGATTCCTTAAATTTATCACTTGCAAGTCTTCTTCCAGTTTCATTCTCTACCATGCAGCTAGAGATTAGTTTTGGGGATTGTTGGAAGTCATTTTTTCATTCCTCATTATTAATATGTTCAGTTCTCTTCTTATTAACACATCCATATGTAGGATGATGGTATTCAGGTTTTTACTTGGGACTAATCACATGATTCTTGTAGCTAATTGCATCAAACGTGACCCGCTTTTTCAGGTTCCCAAGTAGTGAGGTGAAGCAAGAGATTCTTCCCAGTCATAGCTCACGAACAGGTCTGGCTTCTCTCCTTCCCCAAAAGCATGAGCCAACAATGTTGATTGGTTGGAGAATGGGTCTAGCTTCAATCCTGTTGAAGAAACACAATTAGCTGAAGTCCACGATTACAAACATCTCGATTTCTGCGAGCCACGAAAATTTCTACAATTTGATTCTGCTCCTTCTAACAAGAAAAAAGCTCTGCTGCTCTGAGTTTTGTTCTGTTTGAGTTGGTTCTGATATTTAGAATGGCAGGACGAGCTGTTACATTGAGCCGGCGATCATTTTCATTTTCAGCTTCTGAAAAGTGGCGGCAGAACTGAACTGCGCCCTGTATTATGTTGGAGATTAGAACATGACTTGCAATCCTTAATTTCCTTCTAAATAATCCTCAAATCCATCAACATATGATGAATCAAGTTGTATGCTAACAAGTTAAGAAAAGTTTGAATTCTATTTTAGTCTCATTTTCCATATCTATTTCAACTCTAGCTTACTTTTAGTGGATTGGGTTTAAACATAGATCATTTTCAAGTTGAAATGTATATAGAAATTTCTAAGAATCAGGTAAATATAGATCATTGAATCATTGATGTTTAAAAGGGTAACTTTTAAGTTATCTATGGATGAGGTATTTATTCTGAAGTTGAAGATTTGGTATGATTTATTCTAAGGTTAGAAAATTTGGTCTCGAACTTTGAAAAATTGGCGAGGAAAACAAAACCAGCATGATTTGAATATCATAAACGAAGGTCCAAGTAGTAGATTAAATAAGAAATCACTGTGTGTTTGCTGCTGATAATGGTAACCCAGTGGGGAGTGGGGGCCAGAGCCACACATAAAGGGAGTATAAACCACCAACAAAAATCCACCACTTGAACTATCCATATTACCCCCAGGGAGGAATTCATTACTCCATATCGATACCCATCTCTTTTCTTTTCTGATTTCTGAGTTTCTAGGAAACCCACCCATTTTCTTTTATGGTATTTGGTTGATTCTCACTTCCACTCGAGTTTTCCCTTTTTCTCTCATCTAACTTTCAGTTCTCTTGGCCCCAAAGTCCACTCTATCCCTTTCCAGTTTGCTGGGTTTTGGGTTCCCATTGGTTTTTACCTGAATCGATGCCCTTCTCTGCGCTTTCGGCTCATCATCAACATGGTCATGCTGAATAGTTCCTTCGCCGCGTGGATCAGCCGCTTGTTCGCTTGCATGGGGTAAGTTCTTTATCTTCCTCACCTATCATTCAATGCAGTTTTGGAAAGGACTTGTATGTAATCCTTGATCCTAATGGAGTTCTGTGATGCCCCTTTTGTGTATCCCTTGTGAATGATTCTGTTTTTTGACTTACTGAGCAGTACACAGTTTTCTTTGGGCATCTTTGATTAGTATGAAAGAATTTTGATTACTTATTGGTTTTACAGAGCTTGTTGAGTATTCAACTTTGATTGTGTATATTCCAAGTTGTGCGGAAATGGGGCCAATAATATGAACTAGTTCATTTCTTGTTTGTTTTCTGGGCGAAGAAAGTGAAAAGCCAAGTCTTATTCCTTTATGAGGTTGCCCTAACAACTTTATCGCCGATGAAAAGGGTCAAATACTAAAGAACCCATTATCATCCATCATAGATTATTATAGCTTTTGTTCATTTACGAGGAGGAAGTAGCTCTAAGATGGCTAAGTATTACTTTTTGAACGTATTTCTTTTGCTTTCATATTGCATTACCCTTGTGCTGTGTGAATCCGTGGAGTTGTCAAGAGGGTATTAGCCGCCTAATACTTGTCTGTTGTAGACTGTAGTCTTAAGATTATAGTTTTCTTGTGCTGATTTAGTAAAAAGAATTGATATTAAGGTGGATCCTTGAAAAAATGAAACTAAATTCACTAATAGTCGAAGTTTATGCTTGGAAGTATGAAACCCCCACACTTCTCTTAGTTCTGTAGAAGCTGAATTTTGATTCTGAATTGTAGTTGAGATGTTTAATTGCTGCACAATCATTCCCAGTTTCCCTTAGGCTCTTCTTTCGTTTTTCGCCCTGTTTAAATGGTGCTATTGCTTACAACTTCATTAGTAGATGCGTAATCATTGTTGTTGTAATAGCCCAAATCCATCTCTGGCAGATATTGTCCTCTTTAGACTTTCCCTCCCGGGCTTCCCCTCAAGGTTTTAGAACGCATCCACTAGAGAGAGGTTTTCACACCCTTATAACTGAAGTGGGAATGTCGTAGTTGTCATCCAATCTATGGTGTACTATAATATTCAGTTTACCATGGTTTTTAACGTACACGTTCCTTTTTCGGAAGTGTTCTGCTTGTGTTCATGGTGACATCCATTCAATTCATCATGAGAACTCGAGCAATTTAGGATTAATCAATGATCACTCTACATTCAATTTAGAACGTGCGTTCACATAATTCCTATTGTTAATAGCTGTGTGTGTGCATCTAACCATAAATGAAATATTTGACAACTGCCTTGCATTATTGATGAATGGTGCACATGCTATGTTTTTGCTGCAATTTTATAGCATATACTGCTTTATTAGGTTTATAACAGTGCAGGGGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAGTAGTCAAGAAACCGAGCATATCCGATGGTTTTTGGAGCACAAGCACGTGTGATTTGGATAACAGCACCATTCAGTCTCAACGAAGCATCTCGTCTATCAGTACATCAAACCTCACACACAGTCAAAGCAATGTTGGTGGCAGTGTGAGCAACCCTTCTGAATATGTAAACCATGGCAAGTTTCCCTCTTTCTCATCTGATCTTTGTTGAAGTCGTGGGTAACATTCGAGATTGTTAACTGCATTTAACAAGCTATCGTTTCTTCATTATAACCTAGTCAATATAGAGACGAGCAATCTACTTATCTTCATTGCTTTCAGGTTTGCTTCTCTGGAACCAGACTAGGTTGCAGTGGATTGGAAGTAGTAATACAAACACAACGGATGAAACTCAAGAACGACAGAAGGCAAAAATCAGGTCAGTTTACGAGCTTCGTGTGCCTTTGTAAATAGTAGGTATCATAGAGGTATGAAAGGTGTATTAATCATCATACTGTGCGTATACGTATGCTTTTGTATGCAGCTGGCGTGCAACATATGACAGTTTACTGGGTACGAGACAGCCTTTTCCCCATCGAATTCCTTTGTCGGTAAGTTCGCTGTTGAAGTTTTGTCATTTCGTTCTCCAATCACTGTTCGATCTACAAATAAGAGATTCAAAATCTTGGTTTGGACAGGAAATGGTGAACTTTCTTGTTGAAGTATGGGAACAAGAGGGCCTATATGATTGA

mRNA sequence

ATGAAAGTACGTGCTTCAGTGAAGAAGATGTGCGAGTTTTGTAGGACAGTGAAGCGTCGAGGTCGAGTGTATGTATACTGCTCATCCAATCCCAAACACAAGCAACGCCAAGGCCTATCAACATCTGCTAGTGAAGGACCTTCTCCCCACCTGTTCCCAAGTAGTGAGGTGAAGCAAGAGATTCTTCCCAGTCATAGCTCACGAACAGTCCACTCTATCCCTTTCCAGTTTGCTGGGTTTTGGGTTCCCATTGGTTTTTACCTGAATCGATGCCCTTCTCTGCGCTTTCGGCTCATCATCAACATGGTCATGCTGAATAGTTCCTTCGCCGCGTGGATCAGCCGCTTGTTCGCTTGCATGGGGGGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAGTAGTCAAGAAACCGAGCATATCCGATGGTTTTTGGAGCACAAGCACGTGTGATTTGGATAACAGCACCATTCAGTCTCAACGAAGCATCTCGTCTATCAGTACATCAAACCTCACACACAGTCAAAGCAATGTTGGTGGCAGTGTGAGCAACCCTTCTGAATATGTAAACCATGGTTTGCTTCTCTGGAACCAGACTAGGTTGCAGTGGATTGGAAGTAGTAATACAAACACAACGGATGAAACTCAAGAACGACAGAAGGCAAAAATCAGCTGGCGTGCAACATATGACAGTTTACTGGGTACGAGACAGCCTTTTCCCCATCGAATTCCTTTGTCGGAAATGGTGAACTTTCTTGTTGAAGTATGGGAACAAGAGGGCCTATATGATTGA

Coding sequence (CDS)

ATGAAAGTACGTGCTTCAGTGAAGAAGATGTGCGAGTTTTGTAGGACAGTGAAGCGTCGAGGTCGAGTGTATGTATACTGCTCATCCAATCCCAAACACAAGCAACGCCAAGGCCTATCAACATCTGCTAGTGAAGGACCTTCTCCCCACCTGTTCCCAAGTAGTGAGGTGAAGCAAGAGATTCTTCCCAGTCATAGCTCACGAACAGTCCACTCTATCCCTTTCCAGTTTGCTGGGTTTTGGGTTCCCATTGGTTTTTACCTGAATCGATGCCCTTCTCTGCGCTTTCGGCTCATCATCAACATGGTCATGCTGAATAGTTCCTTCGCCGCGTGGATCAGCCGCTTGTTCGCTTGCATGGGGGGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAGTAGTCAAGAAACCGAGCATATCCGATGGTTTTTGGAGCACAAGCACGTGTGATTTGGATAACAGCACCATTCAGTCTCAACGAAGCATCTCGTCTATCAGTACATCAAACCTCACACACAGTCAAAGCAATGTTGGTGGCAGTGTGAGCAACCCTTCTGAATATGTAAACCATGGTTTGCTTCTCTGGAACCAGACTAGGTTGCAGTGGATTGGAAGTAGTAATACAAACACAACGGATGAAACTCAAGAACGACAGAAGGCAAAAATCAGCTGGCGTGCAACATATGACAGTTTACTGGGTACGAGACAGCCTTTTCCCCATCGAATTCCTTTGTCGGAAATGGTGAACTTTCTTGTTGAAGTATGGGAACAAGAGGGCCTATATGATTGA

Protein sequence

MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTSASEGPSPHLFPSSEVKQEILPSHSSRTVHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD

Homology

[Close]

BLAST of Csor.00g216230 vs. ExPASy Swiss-Prot
Match: P73300 (50S ribosomal protein L36 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.5e-10
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 1  MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MKVRASVKKMC+ CR ++RRGRV V CS+NPKHKQRQG
Sbjct: 1  MKVRASVKKMCDKCRVIRRRGRVMVICSANPKHKQRQG 38

[Close]

BLAST of Csor.00g216230 vs. ExPASy Swiss-Prot
Match: A5VLI2 (50S ribosomal protein L36 OS=Lactobacillus reuteri (strain DSM 20016) OX=557436 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.5e-09
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 1  MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MKVR SVKKMCE C+ VKR GRV V CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38

[Close]

BLAST of Csor.00g216230 vs. ExPASy Swiss-Prot
Match: B2G8V5 (50S ribosomal protein L36 OS=Lactobacillus reuteri (strain JCM 1112) OX=557433 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.5e-09
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 1  MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MKVR SVKKMCE C+ VKR GRV V CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38

[Close]

BLAST of Csor.00g216230 vs. ExPASy Swiss-Prot
Match: B3WAJ5 (50S ribosomal protein L36 OS=Lactobacillus casei (strain BL23) OX=543734 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.2e-09
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 1  MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MKVR SVKKMCE C+ V+R+GRV + CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38

[Close]

BLAST of Csor.00g216230 vs. ExPASy Swiss-Prot
Match: Q035A6 (50S ribosomal protein L36 OS=Lactobacillus paracasei (strain ATCC 334 / BCRC 17002 / CIP 107868 / KCTC 3260 / NRRL B-441) OX=321967 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.2e-09
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 1  MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 39
          MKVR SVKKMCE C+ V+R+GRV + CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38

[Close]

BLAST of Csor.00g216230 vs. NCBI nr
Match: KAG6589849.1 (hypothetical protein SDJN03_15272, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 568 bits (1463), Expect = 2.51e-204
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTSASEGPSPHLFPSSEVKQE 60
           MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTSASEGPSPHLFPSSEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTSASEGPSPHLFPSSEVKQE 60

Query: 61  ILPSHSSRTVHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFAAWISRLFACM 120
           ILPSHSSRTVHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFAAWISRLFACM
Sbjct: 61  ILPSHSSRTVHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFAAWISRLFACM 120

Query: 121 GGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISS 180
           GGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISS
Sbjct: 121 GGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISS 180

Query: 181 ISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETQERQKAKISW 240
           ISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETQERQKAKISW
Sbjct: 181 ISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETQERQKAKISW 240

Query: 241 RATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278
           RATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD
Sbjct: 241 RATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278

[Close]

BLAST of Csor.00g216230 vs. NCBI nr
Match: KAG6587898.1 (hypothetical protein SDJN03_16463, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 441 bits (1133), Expect = 1.33e-150
Identity = 228/282 (80.85%), Postives = 245/282 (86.88%), Query Frame = 0


Query: 1   MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTSASEGPSPHLFPSSEVKQE 60
           MKVRASVKKMCEFCRTV+RRGRVY+YCS+NPKHKQRQGLST ASE PSP LF  SEVKQE
Sbjct: 155 MKVRASVKKMCEFCRTVRRRGRVYIYCSANPKHKQRQGLSTFASEAPSPSLFSRSEVKQE 214

Query: 61  ILPSHSSRT--VHSIPFQFAG--FWVPIGFYLNRCPSLRFRLIINMVMLNSSFAAWISRL 120
            LPSHSSRT     IP +     F   + F LNRCPSLRF L INMVMLNSSFAAWISRL
Sbjct: 215 TLPSHSSRTGLASLIPQKHEPTMFLASLSFSLNRCPSLRFWLNINMVMLNSSFAAWISRL 274

Query: 121 FACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQR 180
           FACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKK SISDGFWSTSTCDLDNSTIQSQ 
Sbjct: 275 FACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQP 334

Query: 181 SISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIG-SSNTNTTDETQERQK 240
           SISSISTSNLT + SNVGGSVSNPSE+VNHGLLLWNQ RLQWIG SS++NTTD+TQ+++K
Sbjct: 335 SISSISTSNLTLTHSNVGGSVSNPSEFVNHGLLLWNQNRLQWIGGSSSSNTTDQTQQKRK 394

Query: 241 AKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLY 277
           AKISWRATYDSLL TRQ FPH IPLSEMV FLVE  + +G++
Sbjct: 395 AKISWRATYDSLLSTRQSFPHPIPLSEMVKFLVEFGDFDGIF 436

[Close]

BLAST of Csor.00g216230 vs. NCBI nr
Match: KAG7023519.1 (hypothetical protein SDJN02_14545, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 400 bits (1027), Expect = 5.51e-139
Identity = 198/209 (94.74%), Postives = 198/209 (94.74%), Query Frame = 0


Query: 70  VHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFAAWISRLFACMGGCFGCCTK 129
           VHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFAAWISRLFACMGGCFGCCTK
Sbjct: 11  VHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFAAWISRLFACMGGCFGCCTK 70

Query: 130 PTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTHS 189
           PTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTHS
Sbjct: 71  PTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTHS 130

Query: 190 QSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETQERQKAKISWRATYDSLLG 249
           QSNVGGS           LLLWNQTRLQWIGSSNTNTTDETQERQKAKISWRATYDSLLG
Sbjct: 131 QSNVGGS-----------LLLWNQTRLQWIGSSNTNTTDETQERQKAKISWRATYDSLLG 190

Query: 250 TRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278
           TRQPFPHRIPLSEMVNFLVEVWEQEGLYD
Sbjct: 191 TRQPFPHRIPLSEMVNFLVEVWEQEGLYD 208

[Close]

BLAST of Csor.00g216230 vs. NCBI nr
Match: XP_023516635.1 (uncharacterized protein LOC111780448 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362 bits (930), Expect = 1.08e-124
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 102 MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 161
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 162 TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 221
           TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 120

Query: 222 SNTNTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278
           SNTNTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD
Sbjct: 121 SNTNTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 177

[Close]

BLAST of Csor.00g216230 vs. NCBI nr
Match: XP_022961227.1 (uncharacterized protein LOC111461800 [Cucurbita moschata])

HSP 1 Score: 360 bits (924), Expect = 8.89e-124
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 102 MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 161
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 162 TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 221
           TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 120

Query: 222 SNTNTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278
           SNTNTTDET ERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD
Sbjct: 121 SNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 177

[Close]

BLAST of Csor.00g216230 vs. ExPASy TrEMBL
Match: A0A6J1H9M2 (uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC111461800 PE=4 SV=1)

HSP 1 Score: 360 bits (924), Expect = 4.30e-124
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 102 MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 161
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 162 TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 221
           TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 120

Query: 222 SNTNTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278
           SNTNTTDET ERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD
Sbjct: 121 SNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 177

[Close]

BLAST of Csor.00g216230 vs. ExPASy TrEMBL
Match: A0A6J1JKP7 (uncharacterized protein LOC111485294 OS=Cucurbita maxima OX=3661 GN=LOC111485294 PE=4 SV=1)

HSP 1 Score: 355 bits (912), Expect = 2.89e-122
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 102 MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 161
           MVMLNSSFAAWISRLFACMGGCFGCCTKPT IIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTHIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 162 TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 221
           TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVG SVSNPSEYVNHGLLLWNQTRLQWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGASVSNPSEYVNHGLLLWNQTRLQWIGS 120

Query: 222 SNTNTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278
           SNTNTTDETQERQKAKISWRATYD+LLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD
Sbjct: 121 SNTNTTDETQERQKAKISWRATYDNLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 177

[Close]

BLAST of Csor.00g216230 vs. ExPASy TrEMBL
Match: A0A6J1CTQ5 (uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014486 PE=4 SV=1)

HSP 1 Score: 351 bits (901), Expect = 1.99e-119
Identity = 174/198 (87.88%), Postives = 184/198 (92.93%), Query Frame = 0


Query: 84  IGFYL---NRCPSLRFRLIINMVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPS 143
           +GF+L   NRCP+ RF L INMVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPS
Sbjct: 57  LGFHLFSQNRCPAFRFWLNINMVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPS 116

Query: 144 KGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNP 203
           KGLRIQGR+VKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLT + SNVGGS SNP
Sbjct: 117 KGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTLNPSNVGGSTSNP 176

Query: 204 SEYVNHGLLLWNQTRLQWIGSSNTNTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPL 263
           SE+VNHGLLLWNQ RLQW GSS+  TTD+TQ+R+KAKISWRATYDSLLGTRQPFPH IPL
Sbjct: 177 SEFVNHGLLLWNQNRLQWTGSSSK-TTDQTQQRRKAKISWRATYDSLLGTRQPFPHPIPL 236

Query: 264 SEMVNFLVEVWEQEGLYD 278
           SEMVNFLVEVWEQEGLYD
Sbjct: 237 SEMVNFLVEVWEQEGLYD 253

[Close]

BLAST of Csor.00g216230 vs. ExPASy TrEMBL
Match: A0A6J1I744 (uncharacterized protein LOC111470604 OS=Cucurbita maxima OX=3661 GN=LOC111470604 PE=4 SV=1)

HSP 1 Score: 340 bits (873), Expect = 3.35e-115
Identity = 179/229 (78.17%), Postives = 191/229 (83.41%), Query Frame = 0


Query: 51  LFPSSEVKQEILPSHSSRTVHSIPFQFAGFWVPIGFYLNRCPSLRFRLIINMVMLNSSFA 110
           LFPSS      L S  + T     ++F      + F LNRCPSLRF L INMVMLNSSFA
Sbjct: 30  LFPSSN----FLLSCPNSTPSLASYRFLA---SLSFSLNRCPSLRFWLNINMVMLNSSFA 89

Query: 111 AWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNS 170
           AWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKK SISDGFWSTSTCDLDNS
Sbjct: 90  AWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNS 149

Query: 171 TIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIG-SSNTNTTDE 230
           TIQSQ SISSISTSNLT + SNVG SVSNPSE+VNHGLLLWNQ RLQWIG SS++ TTD+
Sbjct: 150 TIQSQPSISSISTSNLTLTHSNVGASVSNPSEFVNHGLLLWNQNRLQWIGNSSSSKTTDQ 209

Query: 231 TQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278
           TQ ++KAKISWRATYDSLL TRQ FPH IPL+EMV FLVEVWEQEGLYD
Sbjct: 210 TQLKRKAKISWRATYDSLLSTRQCFPHPIPLAEMVKFLVEVWEQEGLYD 251

[Close]

BLAST of Csor.00g216230 vs. ExPASy TrEMBL
Match: A0A5D3C7W3 (DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001290 PE=4 SV=1)

HSP 1 Score: 332 bits (850), Expect = 7.94e-113
Identity = 162/177 (91.53%), Postives = 167/177 (94.35%), Query Frame = 0


Query: 102 MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 161
           MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 162 TSTCDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGS 221
           TSTCDLDNSTIQSQRSISSIST NLT S SNV GSVS+ SE++NHGLLLWNQTR+QWIGS
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTLNLTLSNSNVAGSVSSSSEFINHGLLLWNQTRMQWIGS 120

Query: 222 SNTNTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278
             T  TDETQ+RQKAKISWRATYDSLLGTRQPFPH IPLSEMVNFLVEVWEQEGLYD
Sbjct: 121 GTTKLTDETQQRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 177

[Close]

BLAST of Csor.00g216230 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 219.2 bits (557), Expect = 4.3e-57
Identity = 107/174 (61.49%), Postives = 132/174 (75.86%), Query Frame = 0


Query: 105 LNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTST 164
           L     +WI +LF CMGGCFGCC KP  I+AVDEPSKGLRIQGR+VKKPS+S+ FWSTST
Sbjct: 3   LREIIPSWIYQLFGCMGGCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTST 62

Query: 165 CDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNT 224
           C++DNST+QSQRS+SSIS +N T    +   S SNP+E+VNHGL LWNQTR QW+ +   
Sbjct: 63  CEMDNSTLQSQRSMSSISFTNNT----STSASTSNPTEFVNHGLNLWNQTRQQWLAN--- 122

Query: 225 NTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 279
            T+ +  + ++  ISW ATY+SLLG  + F   IPL EMV+FLV+VWEQEGLYD
Sbjct: 123 GTSQKKAKVREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]

BLAST of Csor.00g216230 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 219.2 bits (557), Expect = 4.3e-57
Identity = 107/174 (61.49%), Postives = 132/174 (75.86%), Query Frame = 0


Query: 105 LNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTST 164
           L     +WI +LF CMGGCFGCC KP  I+AVDEPSKGLRIQGR+VKKPS+S+ FWSTST
Sbjct: 3   LREIIPSWIYQLFGCMGGCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTST 62

Query: 165 CDLDNSTIQSQRSISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNT 224
           C++DNST+QSQRS+SSIS +N T    +   S SNP+E+VNHGL LWNQTR QW+ +   
Sbjct: 63  CEMDNSTLQSQRSMSSISFTNNT----STSASTSNPTEFVNHGLNLWNQTRQQWLAN--- 122

Query: 225 NTTDETQERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 279
            T+ +  + ++  ISW ATY+SLLG  + F   IPL EMV+FLV+VWEQEGLYD
Sbjct: 123 GTSQKKAKVREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]

BLAST of Csor.00g216230 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-35
Identity = 82/162 (50.62%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 120 MGGCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRS 179
           MGGC GC    + T     D PS  +    R  KKPS+S+ FWSTST D+DN T  SQ S
Sbjct: 1   MGGCVGCYREHRSTAASLKDPPSNSI---ARPCKKPSVSEDFWSTSTVDMDNITFPSQGS 60

Query: 180 ISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETQERQKAK 239
           +SS   SN T    +   + + P EYVN GLLLWNQTR +W+G    N  +     Q AK
Sbjct: 61  LSS---SNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPN--NPVDHNQGAK 120

Query: 240 ISWR-ATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 279
           ++W  ATYDSLLG+ + FP  IPL+EMV+FLV++WEQEGLYD
Sbjct: 121 LNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154

[Close]

BLAST of Csor.00g216230 vs. TAIR 10
Match: AT1G15350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-35
Identity = 82/162 (50.62%), Postives = 102/162 (62.96%), Query Frame = 0


Query: 120 MGGCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRS 179
           MGGC GC    + T     D PS  +    R  KKPS+S+ FWSTST D+DN T  SQ S
Sbjct: 1   MGGCVGCYREHRSTAASLKDPPSNSI---ARPCKKPSVSEDFWSTSTVDMDNITFPSQGS 60

Query: 180 ISSISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETQERQKAK 239
           +SS   SN T    +   + + P EYVN GLLLWNQTR +W+G    N  +     Q AK
Sbjct: 61  LSS---SNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPN--NPVDHNQGAK 120

Query: 240 ISWR-ATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 279
           ++W  ATYDSLLG+ + FP  IPL+EMV+FLV++WEQEGLYD
Sbjct: 121 LNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154

[Close]

BLAST of Csor.00g216230 vs. TAIR 10
Match: AT4G32342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-35
Identity = 83/158 (52.53%), Postives = 102/158 (64.56%), Query Frame = 0


Query: 123 CFGCCTKPTP-IIAVDEPSKGLRIQGRVVKKPSI-SDGFWSTSTCDLD-NSTIQSQRSIS 182
           CFGCC +    ++ VDEPSKGL+IQG++VKK S  SD FWSTSTCD+D N TIQSQ S  
Sbjct: 17  CFGCCNRERRLVVEVDEPSKGLKIQGKIVKKDSASSDDFWSTSTCDMDHNITIQSQSS-- 76

Query: 183 SISTSNLTHSQSNVGGSVSNPSEYVNHGLLLWNQTRLQWIGSSNTNTTDETQERQKAKIS 242
                   +   +   S SN +E+VNHGL+LWN TR QW        T +     +  IS
Sbjct: 77  --------NPPFDPQCSTSNSTEFVNHGLILWNHTRQQW----RECLTRQQCLVPEPAIS 136

Query: 243 WRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLY 278
           W +TYDSLL T + FP  IPL EMV+FLV+VWE+EGLY
Sbjct: 137 WNSTYDSLLSTNKLFPQPIPLKEMVHFLVDVWEEEGLY 160

The following BLAST results are available for this feature:

BLAST of Csor.00g216230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P73300	6.5e-10	78.95	50S ribosomal protein L36 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=111...	[more]
A5VLI2	2.5e-09	78.95	50S ribosomal protein L36 OS=Lactobacillus reuteri (strain DSM 20016) OX=557436 ...	[more]
B2G8V5	2.5e-09	78.95	50S ribosomal protein L36 OS=Lactobacillus reuteri (strain JCM 1112) OX=557433 G...	[more]
B3WAJ5	3.2e-09	73.68	50S ribosomal protein L36 OS=Lactobacillus casei (strain BL23) OX=543734 GN=rpmJ...	[more]
Q035A6	3.2e-09	73.68	50S ribosomal protein L36 OS=Lactobacillus paracasei (strain ATCC 334 / BCRC 170...	[more]

BLAST of Csor.00g216230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589849.1	2.51e-204	100.00	hypothetical protein SDJN03_15272, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6587898.1	1.33e-150	80.85	hypothetical protein SDJN03_16463, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7023519.1	5.51e-139	94.74	hypothetical protein SDJN02_14545, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023516635.1	1.08e-124	100.00	uncharacterized protein LOC111780448 [Cucurbita pepo subsp. pepo]	[more]
XP_022961227.1	8.89e-124	99.44	uncharacterized protein LOC111461800 [Cucurbita moschata]	[more]

BLAST of Csor.00g216230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9M2	4.30e-124	99.44	uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC1114618...	[more]
A0A6J1JKP7	2.89e-122	98.31	uncharacterized protein LOC111485294 OS=Cucurbita maxima OX=3661 GN=LOC111485294...	[more]
A0A6J1CTQ5	1.99e-119	87.88	uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1I744	3.35e-115	78.17	uncharacterized protein LOC111470604 OS=Cucurbita maxima OX=3661 GN=LOC111470604...	[more]
A0A5D3C7W3	7.94e-113	91.53	DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]

BLAST of Csor.00g216230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25360.1	4.3e-57	61.49	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25360.2	4.3e-57	61.49	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15350.2	1.2e-35	50.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15350.1	1.2e-35	50.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G32342.1	1.6e-35	52.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000473	Ribosomal protein L36	PFAM	PF00444	Ribosomal_L36	coord: 1..38 e-value: 5.8E-21 score: 74.4
IPR000473	Ribosomal protein L36	TIGRFAM	TIGR01022	TIGR01022	coord: 1..38 e-value: 1.8E-17 score: 61.2
IPR000473	Ribosomal protein L36	PROSITE	PS00828	RIBOSOMAL_L36	coord: 11..37
IPR000473	Ribosomal protein L36	HAMAP	MF_00251	Ribosomal_L36	coord: 1..38 score: 18.611782
IPR025124	Domain of unknown function DUF4050	PFAM	PF13259	DUF4050	coord: 163..233 e-value: 2.5E-9 score: 37.8 coord: 237..278 e-value: 4.4E-12 score: 46.7
None	No IPR available	PANTHER	PTHR33373	OS07G0479600 PROTEIN	coord: 102..278
None	No IPR available	PANTHER	PTHR33373:SF13	DUF4050 FAMILY PROTEIN	coord: 102..278
IPR035977	Ribosomal protein L36 superfamily	SUPERFAMILY	57840	Ribosomal protein L36	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g216230.m01	Csor.00g216230.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome