Csor.00g210650 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAGAAGGGTGGTTTTGTTTTGGTGTTAGTGTTATGGATGGTGGTGGTGGTTGGCGTTGGCAAGGCCGACGAGGAAGCACAAAATAATATCGAAGAAACAGTAGGTAGAGTAATATCGGCATCGGCAGCATCCTCTCCTTCGCCTCCCAACTCCTATTGGGAGGAGGTTCGAAAAGTGGTCAATAGAGCCGTCACCTGCCTCTTCCCACCAAAAATAGACTTCCGACAAGGAAATCCGGTGGAAGATGGACAAGTGAACGGGAATGAGAATATGAAGGAATCCATTACCAAGAGCTTCCACACAACCAAACAAATGGTGGAGGATTCTGCCAAGGCTGCCGCTCAAACGCTCCAACCACAACCAGATTCGGAACTCTAG ATGATGAAGAAGGGTGGTTTTGTTTTGGTGTTAGTGTTATGGATGGTGGTGGTGGTTGGCGTTGGCAAGGCCGACGAGGAAGCACAAAATAATATCGAAGAAACAGTAGGTAGAGTAATATCGGCATCGGCAGCATCCTCTCCTTCGCCTCCCAACTCCTATTGGGAGGAGGTTCGAAAAGTGGTCAATAGAGCCGTCACCTGCCTCTTCCCACCAAAAATAGACTTCCGACAAGGAAATCCGGTGGAAGATGGACAAGTGAACGGGAATGAGAATATGAAGGAATCCATTACCAAGAGCTTCCACACAACCAAACAAATGGTGGAGGATTCTGCCAAGGCTGCCGCTCAAACGCTCCAACCACAACCAGATTCGGAACTCTAG ATGATGAAGAAGGGTGGTTTTGTTTTGGTGTTAGTGTTATGGATGGTGGTGGTGGTTGGCGTTGGCAAGGCCGACGAGGAAGCACAAAATAATATCGAAGAAACAGTAGGTAGAGTAATATCGGCATCGGCAGCATCCTCTCCTTCGCCTCCCAACTCCTATTGGGAGGAGGTTCGAAAAGTGGTCAATAGAGCCGTCACCTGCCTCTTCCCACCAAAAATAGACTTCCGACAAGGAAATCCGGTGGAAGATGGACAAGTGAACGGGAATGAGAATATGAAGGAATCCATTACCAAGAGCTTCCACACAACCAAACAAATGGTGGAGGATTCTGCCAAGGCTGCCGCTCAAACGCTCCAACCACAACCAGATTCGGAACTCTAG MMKKGGFVLVLVLWMVVVVGVGKADEEAQNNIEETVGRVISASAASSPSPPNSYWEEVRKVVNRAVTCLFPPKIDFRQGNPVEDGQVNGNENMKESITKSFHTTKQMVEDSAKAAAQTLQPQPDSEL Homology
BLAST of Csor.00g210650 vs. NCBI nr
Match: KAG6571257.1 (hypothetical protein SDJN03_30172, partial [Cucurbita argyrosperma subsp. sororia] >KAG6571261.1 hypothetical protein SDJN03_30176, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 250 bits (639), Expect = 1.09e-83 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Csor.00g210650 vs. NCBI nr
Match: KAG6571255.1 (hypothetical protein SDJN03_30170, partial [Cucurbita argyrosperma subsp. sororia] >KAG6571258.1 hypothetical protein SDJN03_30173, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 248 bits (632), Expect = 1.28e-82 Identity = 125/127 (98.43%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Csor.00g210650 vs. NCBI nr
Match: KAG6571256.1 (hypothetical protein SDJN03_30171, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 246 bits (628), Expect = 5.20e-82 Identity = 125/127 (98.43%), Postives = 126/127 (99.21%), Query Frame = 0
BLAST of Csor.00g210650 vs. NCBI nr
Match: KAG6571254.1 (hypothetical protein SDJN03_30169, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 244 bits (622), Expect = 4.28e-81 Identity = 124/127 (97.64%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Csor.00g210650 vs. NCBI nr
Match: XP_022948557.1 (uncharacterized protein LOC111452199 [Cucurbita moschata]) HSP 1 Score: 209 bits (531), Expect = 1.98e-67 Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of Csor.00g210650 vs. ExPASy TrEMBL
Match: A0A6J1G9K3 (uncharacterized protein LOC111452199 OS=Cucurbita moschata OX=3662 GN=LOC111452199 PE=4 SV=1) HSP 1 Score: 209 bits (531), Expect = 9.59e-68 Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of Csor.00g210650 vs. ExPASy TrEMBL
Match: A0A0A0L904 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G642710 PE=4 SV=1) HSP 1 Score: 133 bits (334), Expect = 1.54e-37 Identity = 80/131 (61.07%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of Csor.00g210650 vs. ExPASy TrEMBL
Match: A0A5A7VE77 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00220 PE=4 SV=1) HSP 1 Score: 122 bits (306), Expect = 2.68e-33 Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 0
BLAST of Csor.00g210650 vs. ExPASy TrEMBL
Match: A0A1S3CDE0 (uncharacterized protein LOC103499155 OS=Cucumis melo OX=3656 GN=LOC103499155 PE=4 SV=1) HSP 1 Score: 122 bits (306), Expect = 2.68e-33 Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 0
BLAST of Csor.00g210650 vs. ExPASy TrEMBL
Match: A0A6J1D2A4 (uncharacterized protein LOC111016933 OS=Momordica charantia OX=3673 GN=LOC111016933 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.18e-15 Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 0
BLAST of Csor.00g210650 vs. TAIR 10
Match: AT1G16850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 7.0e-07 Identity = 25/67 (37.31%), Postives = 41/67 (61.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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