Csor.00g195470 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g195470
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	UDP-glucuronate decarboxylase
Location	Csor_Chr01: 1497742 .. 1498365 (-)
RNA-Seq Expression	Csor.00g195470
Synteny	Csor.00g195470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCGGAGCTAATTTTCAGAGGGCACGACGAGACCCAACCCACGGTGGACGCTTATTCCCCCAAACCCCCAAAGCCATGGCTGTCCGTCACCCGTCCGATCCGCTACATGCTCCGGGAGCAGCGCCTCCTCTTCGTCCTCCTCGGCATTGCCATCGCCACTGTCGCCTTCACCCTCTTCCCCTCTTCCAATTCCGCATCCCAAGCCAGCTACAACTACGACCCGATCCCGACAGAGCTAGCTCGGTGGTCAAACACGCCGTCGTACGAGCACCGCCCCCGGTTCCACGTCCACCGCGTCATGAACTCCGGAGGCAAAATACCACTCGGGCTAAAGCGAAAAGGACTACGGATCGTCGTCACCGGCGGAGCCGGGTTTGTCGGGTCGCACCTTGTGGACCGTCTGATCGACAGAGGCGACAGCGTCATCGTAGTCGACAATTTCTTCACCGGACGGAAGGAGAACGTGATGCACCATTTTGGGAATCCGAGATTCGAGCTGATCCGACACGATGTGGTCGAGCCGCTACTTCTTGAAGTGGATCAGATCTACCATCTCGCCTGCCCTGCTTCCCCTGTTCATTACAAATTCAACCCTGTCAAGACCATCATATCCTTTTGA

mRNA sequence

ATGGGATCGGAGCTAATTTTCAGAGGGCACGACGAGACCCAACCCACGGTGGACGCTTATTCCCCCAAACCCCCAAAGCCATGGCTGTCCGTCACCCGTCCGATCCGCTACATGCTCCGGGAGCAGCGCCTCCTCTTCGTCCTCCTCGGCATTGCCATCGCCACTGTCGCCTTCACCCTCTTCCCCTCTTCCAATTCCGCATCCCAAGCCAGCTACAACTACGACCCGATCCCGACAGAGCTAGCTCGGTGGTCAAACACGCCGTCGTACGAGCACCGCCCCCGGTTCCACGTCCACCGCGTCATGAACTCCGGAGGCAAAATACCACTCGGGCTAAAGCGAAAAGGACTACGGATCGTCGTCACCGGCGGAGCCGGGTTTGTCGGGTCGCACCTTGTGGACCGTCTGATCGACAGAGGCGACAGCGTCATCGTAGTCGACAATTTCTTCACCGGACGGAAGGAGAACGTGATGCACCATTTTGGGAATCCGAGATTCGAGCTGATCCGACACGATGTGGTCGAGCCGCTACTTCTTGAAGTGGATCAGATCTACCATCTCGCCTGCCCTGCTTCCCCTGTTCATTACAAATTCAACCCTGTCAAGACCATCATATCCTTTTGA

Coding sequence (CDS)

ATGGGATCGGAGCTAATTTTCAGAGGGCACGACGAGACCCAACCCACGGTGGACGCTTATTCCCCCAAACCCCCAAAGCCATGGCTGTCCGTCACCCGTCCGATCCGCTACATGCTCCGGGAGCAGCGCCTCCTCTTCGTCCTCCTCGGCATTGCCATCGCCACTGTCGCCTTCACCCTCTTCCCCTCTTCCAATTCCGCATCCCAAGCCAGCTACAACTACGACCCGATCCCGACAGAGCTAGCTCGGTGGTCAAACACGCCGTCGTACGAGCACCGCCCCCGGTTCCACGTCCACCGCGTCATGAACTCCGGAGGCAAAATACCACTCGGGCTAAAGCGAAAAGGACTACGGATCGTCGTCACCGGCGGAGCCGGGTTTGTCGGGTCGCACCTTGTGGACCGTCTGATCGACAGAGGCGACAGCGTCATCGTAGTCGACAATTTCTTCACCGGACGGAAGGAGAACGTGATGCACCATTTTGGGAATCCGAGATTCGAGCTGATCCGACACGATGTGGTCGAGCCGCTACTTCTTGAAGTGGATCAGATCTACCATCTCGCCTGCCCTGCTTCCCCTGTTCATTACAAATTCAACCCTGTCAAGACCATCATATCCTTTTGA

Protein sequence

MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTLFPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIISF

Homology

[Close]

BLAST of Csor.00g195470 vs. ExPASy Swiss-Prot
Match: Q9LZI2 (UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 5.1e-76
Identity = 147/213 (69.01%), Postives = 168/213 (78.87%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           M SELI R H+  QPT DAY PKP KPW +VTRP+RYMLREQRL+FVL+GIAIAT+ FT+
Sbjct: 1   MASELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query: 61  FPSSNSASQAS-----YNYDP----IPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLG 120
           FP S  ++  S     Y   P    +P   A+    PS E     +++R+  +GGKIPLG
Sbjct: 61  FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQ--RKPSLE-----YLNRIGATGGKIPLG 120

Query: 121 LKRKGLRIVVTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRH 180
           LKRKGLR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRKENVMHHF NP FE+IRH
Sbjct: 121 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRH 180

Query: 181 DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTI 205
           DVVEP+LLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 DVVEPILLEVDQIYHLACPASPVHYKFNPVKTI 206

[Close]

BLAST of Csor.00g195470 vs. ExPASy Swiss-Prot
Match: Q8S8T4 (UDP-glucuronic acid decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=UXS4 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-72
Identity = 139/208 (66.83%), Postives = 164/208 (78.85%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           M SEL  R H+  QP  ++Y PKP KPW    RPIRYMLREQRL+FVL+GIAIAT+ FT+
Sbjct: 1   MASELTNRRHEIEQPEAESYYPKPIKPWFVAIRPIRYMLREQRLVFVLVGIAIATLGFTI 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNT--PSYEH-RPRF-HVHRVMNSGGKIPLGLKRKG 120
           F  S++     Y+ DP+     R  ++  P+  H +P   ++ R+ ++GGKIPLGLKRK 
Sbjct: 61  FSKSSNHQPIPYDVDPLSGYGMRSESSYLPATIHKKPSIEYMSRIGSAGGKIPLGLKRKV 120

Query: 121 LRIVVTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEP 180
           LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRKENVMHHF NP FE+IRHDVVEP
Sbjct: 121 LRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIRHDVVEP 180

Query: 181 LLLEVDQIYHLACPASPVHYKFNPVKTI 205
           +LLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 ILLEVDQIYHLACPASPVHYKFNPVKTI 208

[Close]

BLAST of Csor.00g195470 vs. ExPASy Swiss-Prot
Match: Q8VZC0 (UDP-glucuronic acid decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=UXS1 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.9e-54
Identity = 115/196 (58.67%), Postives = 138/196 (70.41%), Query Frame = 0


Query: 11  DETQPTVDA--YSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTLFPSSNSAS 70
           +ET P   +  YSPK  K   S+ R + Y+ REQRLLF+L+GI I +  F L PS +   
Sbjct: 14  EETIPMSQSSPYSPKTLKHPRSLPRSLHYLFREQRLLFILVGILIGSTFFILQPSLSRLG 73

Query: 71  QASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIVVTGGAGFV 130
            A      + T    ++ T S   R  F+        G++P+G+ RK LRIVVTGGAGFV
Sbjct: 74  AAEST--SLITRSVSYAVTDSPPSRSTFNSGGGGGRTGRVPVGIGRKRLRIVVTGGAGFV 133

Query: 131 GSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLA 190
           GSHLVD+LI RGD VIV+DNFFTGRKEN++H F NPRFELIRHDVVEP+LLEVDQIYHLA
Sbjct: 134 GSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVVEPILLEVDQIYHLA 193

Query: 191 CPASPVHYKFNPVKTI 205
           CPASPVHYK+NPVKTI
Sbjct: 194 CPASPVHYKYNPVKTI 207

[Close]

BLAST of Csor.00g195470 vs. ExPASy Swiss-Prot
Match: Q9SN95 (UDP-glucuronic acid decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=UXS5 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-31
Identity = 61/92 (66.30%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 114 RKGLRIVVTGGAGFVGSHLVDRLID-RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHD 173
           +  +RI+++GGAGF+GSHLVD+L++   + VIV DN+FTG K+N+    G+PRFELIRHD
Sbjct: 26  QSNMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 85

Query: 174 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTI 205
           V EPLL+EVDQIYHLACPASP+ YK+NPVKTI
Sbjct: 86  VTEPLLIEVDQIYHLACPASPIFYKYNPVKTI 117

[Close]

BLAST of Csor.00g195470 vs. ExPASy Swiss-Prot
Match: Q9ZV36 (UDP-glucuronic acid decarboxylase 6 OS=Arabidopsis thaliana OX=3702 GN=UXS6 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.0e-31
Identity = 62/92 (67.39%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 114 RKGLRIVVTGGAGFVGSHLVDRLI-DRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHD 173
           +  +RI+VTGGAGF+GSHLVD+L+ +  + VIV DN+FTG K+N+    G+PRFELIRHD
Sbjct: 28  QSNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 87

Query: 174 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTI 205
           V EPL +EVDQIYHLACPASP+ YK+NPVKTI
Sbjct: 88  VTEPLFVEVDQIYHLACPASPIFYKYNPVKTI 119

[Close]

BLAST of Csor.00g195470 vs. NCBI nr
Match: KAG6606959.1 (UDP-glucuronic acid decarboxylase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 427 bits (1099), Expect = 3.29e-151
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL
Sbjct: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120
           FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV
Sbjct: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120

Query: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE
Sbjct: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180

Query: 181 VDQIYHLACPASPVHYKFNPVKTIISF 207
           VDQIYHLACPASPVHYKFNPVKTIISF
Sbjct: 181 VDQIYHLACPASPVHYKFNPVKTIISF 207

[Close]

BLAST of Csor.00g195470 vs. NCBI nr
Match: XP_022997951.1 (UDP-glucuronic acid decarboxylase 2-like [Cucurbita maxima])

HSP 1 Score: 419 bits (1076), Expect = 3.49e-144
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           MGSELIFRGHDETQPT DAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIAT+AF+L
Sbjct: 1   MGSELIFRGHDETQPTADAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATIAFSL 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120
           FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV
Sbjct: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120

Query: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE
Sbjct: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180

Query: 181 VDQIYHLACPASPVHYKFNPVKTI 204
           VDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 VDQIYHLACPASPVHYKFNPVKTI 204

[Close]

BLAST of Csor.00g195470 vs. NCBI nr
Match: XP_023524503.1 (UDP-glucuronic acid decarboxylase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419 bits (1076), Expect = 3.49e-144
Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           MGSELIFRGHDETQPT DAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIAT+ FTL
Sbjct: 1   MGSELIFRGHDETQPTADAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATIVFTL 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120
           FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV
Sbjct: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120

Query: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE
Sbjct: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180

Query: 181 VDQIYHLACPASPVHYKFNPVKTI 204
           VDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 VDQIYHLACPASPVHYKFNPVKTI 204

[Close]

BLAST of Csor.00g195470 vs. NCBI nr
Match: XP_022948747.1 (UDP-glucuronic acid decarboxylase 2-like [Cucurbita moschata])

HSP 1 Score: 418 bits (1075), Expect = 4.95e-144
Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           MGSELIFRGHDET PT DAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL
Sbjct: 1   MGSELIFRGHDETHPTADAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120
           FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHR+MNSGGKIPLGLKRKGLRIV
Sbjct: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRIMNSGGKIPLGLKRKGLRIV 120

Query: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE
Sbjct: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180

Query: 181 VDQIYHLACPASPVHYKFNPVKTI 204
           VDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 VDQIYHLACPASPVHYKFNPVKTI 204

[Close]

BLAST of Csor.00g195470 vs. NCBI nr
Match: TYK29507.1 (UDP-glucuronic acid decarboxylase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 386 bits (991), Expect = 9.00e-135
Identity = 189/207 (91.30%), Postives = 192/207 (92.75%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           MGSELIFRGHDETQP  DAYSPKPPKPWLSVTRPIRYMLREQRLLFVL+GIAIAT  F L
Sbjct: 1   MGSELIFRGHDETQPAADAYSPKPPKPWLSVTRPIRYMLREQRLLFVLVGIAIATFVFAL 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120
            PSSN  S+  Y  DPIPTELARWSNTPSYEHR  F VHRVMNSGGKIPLGLKRKGLRIV
Sbjct: 61  LPSSNYPSRVGY--DPIPTELARWSNTPSYEHRAGFQVHRVMNSGGKIPLGLKRKGLRIV 120

Query: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLI+RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE
Sbjct: 121 VTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180

Query: 181 VDQIYHLACPASPVHYKFNPVKTIISF 207
           VDQIYHLACPASPVHYKFNPVKTIISF
Sbjct: 181 VDQIYHLACPASPVHYKFNPVKTIISF 205

[Close]

BLAST of Csor.00g195470 vs. ExPASy TrEMBL
Match: A0A6J1K8X9 (UDP-glucuronate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111492747 PE=3 SV=1)

HSP 1 Score: 419 bits (1076), Expect = 1.69e-144
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           MGSELIFRGHDETQPT DAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIAT+AF+L
Sbjct: 1   MGSELIFRGHDETQPTADAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATIAFSL 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120
           FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV
Sbjct: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120

Query: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE
Sbjct: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180

Query: 181 VDQIYHLACPASPVHYKFNPVKTI 204
           VDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 VDQIYHLACPASPVHYKFNPVKTI 204

[Close]

BLAST of Csor.00g195470 vs. ExPASy TrEMBL
Match: A0A6J1GA35 (UDP-glucuronate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111452324 PE=3 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 2.40e-144
Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           MGSELIFRGHDET PT DAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL
Sbjct: 1   MGSELIFRGHDETHPTADAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120
           FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHR+MNSGGKIPLGLKRKGLRIV
Sbjct: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRIMNSGGKIPLGLKRKGLRIV 120

Query: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE
Sbjct: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180

Query: 181 VDQIYHLACPASPVHYKFNPVKTI 204
           VDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 VDQIYHLACPASPVHYKFNPVKTI 204

[Close]

BLAST of Csor.00g195470 vs. ExPASy TrEMBL
Match: A0A5D3E094 (UDP-glucuronate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001090 PE=3 SV=1)

HSP 1 Score: 386 bits (991), Expect = 4.36e-135
Identity = 189/207 (91.30%), Postives = 192/207 (92.75%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           MGSELIFRGHDETQP  DAYSPKPPKPWLSVTRPIRYMLREQRLLFVL+GIAIAT  F L
Sbjct: 1   MGSELIFRGHDETQPAADAYSPKPPKPWLSVTRPIRYMLREQRLLFVLVGIAIATFVFAL 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120
            PSSN  S+  Y  DPIPTELARWSNTPSYEHR  F VHRVMNSGGKIPLGLKRKGLRIV
Sbjct: 61  LPSSNYPSRVGY--DPIPTELARWSNTPSYEHRAGFQVHRVMNSGGKIPLGLKRKGLRIV 120

Query: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLI+RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE
Sbjct: 121 VTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180

Query: 181 VDQIYHLACPASPVHYKFNPVKTIISF 207
           VDQIYHLACPASPVHYKFNPVKTIISF
Sbjct: 181 VDQIYHLACPASPVHYKFNPVKTIISF 205

[Close]

BLAST of Csor.00g195470 vs. ExPASy TrEMBL
Match: A0A6J1F9C9 (UDP-glucuronate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111442018 PE=3 SV=1)

HSP 1 Score: 387 bits (993), Expect = 6.98e-132
Identity = 187/206 (90.78%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           MGSELIFRGHDETQP  DAYSPKPPKPWLSVTRPI YMLREQRLLFVL+GI IAT+AFTL
Sbjct: 1   MGSELIFRGHDETQPPADAYSPKPPKPWLSVTRPIHYMLREQRLLFVLVGIGIATLAFTL 60

Query: 61  FPSSNSASQASYNY--DPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLR 120
           FPSSNS S+  Y Y  DPIPT+LARWSNTPSYEHR  F +HRVMNSGGKIPLGLKRKGLR
Sbjct: 61  FPSSNSPSRVGYGYGYDPIPTDLARWSNTPSYEHRAGFQIHRVMNSGGKIPLGLKRKGLR 120

Query: 121 IVVTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLL 180
           IVVTGGAGFVGSHLVDRLI+RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLL
Sbjct: 121 IVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLL 180

Query: 181 LEVDQIYHLACPASPVHYKFNPVKTI 204
           LEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 LEVDQIYHLACPASPVHYKFNPVKTI 206

[Close]

BLAST of Csor.00g195470 vs. ExPASy TrEMBL
Match: A0A0A0KTB2 (UDP-glucuronate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_4G001800 PE=3 SV=1)

HSP 1 Score: 386 bits (991), Expect = 1.23e-131
Identity = 188/204 (92.16%), Postives = 192/204 (94.12%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           MGSELIFRGHDETQP  DAYSPKPPKPWLSVTRPIRYMLREQRL+FVL+GIAIAT  FTL
Sbjct: 1   MGSELIFRGHDETQPAADAYSPKPPKPWLSVTRPIRYMLREQRLVFVLVGIAIATFVFTL 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIV 120
           FPSSNS S+  Y  DPIPTELARWSNTPSYEHR  F VHRVMNSGGKIPLGLKRKGLRIV
Sbjct: 61  FPSSNSPSRVGY--DPIPTELARWSNTPSYEHRAGFQVHRVMNSGGKIPLGLKRKGLRIV 120

Query: 121 VTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLI+RGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE
Sbjct: 121 VTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 180

Query: 181 VDQIYHLACPASPVHYKFNPVKTI 204
           VDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 VDQIYHLACPASPVHYKFNPVKTI 202

[Close]

BLAST of Csor.00g195470 vs. TAIR 10
Match: AT3G62830.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 285.4 bits (729), Expect = 3.6e-77
Identity = 147/213 (69.01%), Postives = 168/213 (78.87%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           M SELI R H+  QPT DAY PKP KPW +VTRP+RYMLREQRL+FVL+GIAIAT+ FT+
Sbjct: 1   MASELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query: 61  FPSSNSASQAS-----YNYDP----IPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLG 120
           FP S  ++  S     Y   P    +P   A+    PS E     +++R+  +GGKIPLG
Sbjct: 61  FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQ--RKPSLE-----YLNRIGATGGKIPLG 120

Query: 121 LKRKGLRIVVTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRH 180
           LKRKGLR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRKENVMHHF NP FE+IRH
Sbjct: 121 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRH 180

Query: 181 DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTI 205
           DVVEP+LLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 DVVEPILLEVDQIYHLACPASPVHYKFNPVKTI 206

[Close]

BLAST of Csor.00g195470 vs. TAIR 10
Match: AT3G62830.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 285.4 bits (729), Expect = 3.6e-77
Identity = 147/213 (69.01%), Postives = 168/213 (78.87%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           M SELI R H+  QPT DAY PKP KPW +VTRP+RYMLREQRL+FVL+GIAIAT+ FT+
Sbjct: 1   MASELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query: 61  FPSSNSASQAS-----YNYDP----IPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLG 120
           FP S  ++  S     Y   P    +P   A+    PS E     +++R+  +GGKIPLG
Sbjct: 61  FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQ--RKPSLE-----YLNRIGATGGKIPLG 120

Query: 121 LKRKGLRIVVTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRH 180
           LKRKGLR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRKENVMHHF NP FE+IRH
Sbjct: 121 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRH 180

Query: 181 DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTI 205
           DVVEP+LLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 DVVEPILLEVDQIYHLACPASPVHYKFNPVKTI 206

[Close]

BLAST of Csor.00g195470 vs. TAIR 10
Match: AT2G47650.1 (UDP-xylose synthase 4 )

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-73
Identity = 139/208 (66.83%), Postives = 164/208 (78.85%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           M SEL  R H+  QP  ++Y PKP KPW    RPIRYMLREQRL+FVL+GIAIAT+ FT+
Sbjct: 1   MASELTNRRHEIEQPEAESYYPKPIKPWFVAIRPIRYMLREQRLVFVLVGIAIATLGFTI 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNT--PSYEH-RPRF-HVHRVMNSGGKIPLGLKRKG 120
           F  S++     Y+ DP+     R  ++  P+  H +P   ++ R+ ++GGKIPLGLKRK 
Sbjct: 61  FSKSSNHQPIPYDVDPLSGYGMRSESSYLPATIHKKPSIEYMSRIGSAGGKIPLGLKRKV 120

Query: 121 LRIVVTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEP 180
           LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRKENVMHHF NP FE+IRHDVVEP
Sbjct: 121 LRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIRHDVVEP 180

Query: 181 LLLEVDQIYHLACPASPVHYKFNPVKTI 205
           +LLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 ILLEVDQIYHLACPASPVHYKFNPVKTI 208

[Close]

BLAST of Csor.00g195470 vs. TAIR 10
Match: AT2G47650.2 (UDP-xylose synthase 4 )

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-73
Identity = 139/208 (66.83%), Postives = 164/208 (78.85%), Query Frame = 0


Query: 1   MGSELIFRGHDETQPTVDAYSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTL 60
           M SEL  R H+  QP  ++Y PKP KPW    RPIRYMLREQRL+FVL+GIAIAT+ FT+
Sbjct: 1   MASELTNRRHEIEQPEAESYYPKPIKPWFVAIRPIRYMLREQRLVFVLVGIAIATLGFTI 60

Query: 61  FPSSNSASQASYNYDPIPTELARWSNT--PSYEH-RPRF-HVHRVMNSGGKIPLGLKRKG 120
           F  S++     Y+ DP+     R  ++  P+  H +P   ++ R+ ++GGKIPLGLKRK 
Sbjct: 61  FSKSSNHQPIPYDVDPLSGYGMRSESSYLPATIHKKPSIEYMSRIGSAGGKIPLGLKRKV 120

Query: 121 LRIVVTGGAGFVGSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEP 180
           LR+VVTGGAGFVGSHLVDRL+ RGD+VIVVDNFFTGRKENVMHHF NP FE+IRHDVVEP
Sbjct: 121 LRVVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMHHFNNPNFEMIRHDVVEP 180

Query: 181 LLLEVDQIYHLACPASPVHYKFNPVKTI 205
           +LLEVDQIYHLACPASPVHYKFNPVKTI
Sbjct: 181 ILLEVDQIYHLACPASPVHYKFNPVKTI 208

[Close]

BLAST of Csor.00g195470 vs. TAIR 10
Match: AT3G53520.1 (UDP-glucuronic acid decarboxylase 1 )

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-55
Identity = 115/196 (58.67%), Postives = 138/196 (70.41%), Query Frame = 0


Query: 11  DETQPTVDA--YSPKPPKPWLSVTRPIRYMLREQRLLFVLLGIAIATVAFTLFPSSNSAS 70
           +ET P   +  YSPK  K   S+ R + Y+ REQRLLF+L+GI I +  F L PS +   
Sbjct: 14  EETIPMSQSSPYSPKTLKHPRSLPRSLHYLFREQRLLFILVGILIGSTFFILQPSLSRLG 73

Query: 71  QASYNYDPIPTELARWSNTPSYEHRPRFHVHRVMNSGGKIPLGLKRKGLRIVVTGGAGFV 130
            A      + T    ++ T S   R  F+        G++P+G+ RK LRIVVTGGAGFV
Sbjct: 74  AAEST--SLITRSVSYAVTDSPPSRSTFNSGGGGGRTGRVPVGIGRKRLRIVVTGGAGFV 133

Query: 131 GSHLVDRLIDRGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLA 190
           GSHLVD+LI RGD VIV+DNFFTGRKEN++H F NPRFELIRHDVVEP+LLEVDQIYHLA
Sbjct: 134 GSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNPRFELIRHDVVEPILLEVDQIYHLA 193

Query: 191 CPASPVHYKFNPVKTI 205
           CPASPVHYK+NPVKTI
Sbjct: 194 CPASPVHYKYNPVKTI 207

The following BLAST results are available for this feature:

BLAST of Csor.00g195470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZI2	5.1e-76	69.01	UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1...	[more]
Q8S8T4	1.5e-72	66.83	UDP-glucuronic acid decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=UXS4 PE=2...	[more]
Q8VZC0	1.9e-54	58.67	UDP-glucuronic acid decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=UXS1 PE=1...	[more]
Q9SN95	3.8e-31	66.30	UDP-glucuronic acid decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=UXS5 PE=2...	[more]
Q9ZV36	5.0e-31	67.39	UDP-glucuronic acid decarboxylase 6 OS=Arabidopsis thaliana OX=3702 GN=UXS6 PE=2...	[more]

BLAST of Csor.00g195470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606959.1	3.29e-151	100.00	UDP-glucuronic acid decarboxylase 2, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022997951.1	3.49e-144	98.53	UDP-glucuronic acid decarboxylase 2-like [Cucurbita maxima]	[more]
XP_023524503.1	3.49e-144	98.53	UDP-glucuronic acid decarboxylase 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022948747.1	4.95e-144	98.53	UDP-glucuronic acid decarboxylase 2-like [Cucurbita moschata]	[more]
TYK29507.1	9.00e-135	91.30	UDP-glucuronic acid decarboxylase 2 [Cucumis melo var. makuwa]	[more]

BLAST of Csor.00g195470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K8X9	1.69e-144	98.53	UDP-glucuronate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111492747 PE=3 S...	[more]
A0A6J1GA35	2.40e-144	98.53	UDP-glucuronate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111452324 PE=3...	[more]
A0A5D3E094	4.36e-135	91.30	UDP-glucuronate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1F9C9	6.98e-132	90.78	UDP-glucuronate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111442018 PE=3...	[more]
A0A0A0KTB2	1.23e-131	92.16	UDP-glucuronate decarboxylase OS=Cucumis sativus OX=3659 GN=Csa_4G001800 PE=3 SV...	[more]

BLAST of Csor.00g195470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62830.1	3.6e-77	69.01	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G62830.2	3.6e-77	69.01	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47650.1	1.1e-73	66.83	UDP-xylose synthase 4	[more]
AT2G47650.2	1.1e-73	66.83	UDP-xylose synthase 4	[more]
AT3G53520.1	1.3e-55	58.67	UDP-glucuronic acid decarboxylase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 121..203 e-value: 2.5E-12 score: 46.9
None	No IPR available	GENE3D	3.40.50.720		coord: 113..206 e-value: 5.6E-37 score: 129.8
None	No IPR available	PANTHER	PTHR43078:SF19	UDP-GLUCURONIC ACID DECARBOXYLASE 4	coord: 1..204
IPR044516	UDP-glucuronic acid decarboxylase	PANTHER	PTHR43078	UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED	coord: 1..204
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 114..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g195470.m01	Csor.00g195470.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042732	D-xylose metabolic process
biological_process	GO:0033320	UDP-D-xylose biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0070403	NAD+ binding
molecular_function	GO:0048040	UDP-glucuronate decarboxylase activity