Csor.00g194460 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g194460
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Non-specific lipid-transfer protein 2-like
Location	Csor_Chr01: 2059457 .. 2061978 (-)
RNA-Seq Expression	Csor.00g194460
Synteny	Csor.00g194460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAACAGGTCTTTGCATTCTGGTGGCGGTGGCGATGGTGGCAGTTCTCACCGGAGCTCGTCTCGGGGAAGCAGTGACTTGCAACCCCATGGATCTGAGCTCATGTGTCGCTGCAATCACGTCGTCGGAGGCGCCTACACCGACTTGCTGCGCGAAGTTGAAGGAACAACAGTCATGCTATTGTGGGTACCTAAAAGATCCAAAGTTCAAACCTTATGTGACATCTCCTCGCGTCAGAGTGGTTGCGTCCATCTGCCGTGTTGCTGTCCCAACCTGCTAGAAACCATGCTCCCCATAATGCAAATGGAAGTTGGTATATGCGAATGTAATCCCTATTACCAAATCAAATTATAAATAAAAATGGGATTATTACGTACTTGTCTCTATCGTTCAAACTTTTTTAATTTTTTTCGGTAATTAGAGATATTTGTAACGATCCAAGTCCACCGCTAGGAGAGAGAAATTTCTACACCCCTTTGAGGCCCAGTGTTCTTGCTGGCACTCGTTCCCTTCTCCATCGATCTGGGAACTCTCGATCCACCTCTTTTGGAGCTAGGGTTCTTGATGACACGATGTGAGACCCTTCACAATCCATCCCATTCAAGGTCCAACGTCTTTGCTGACACACCACCCTTCAAGGTTTTGCCTCATCGCTGACACATTGCCTAGTGTCTAGTTCTAATACCATTTGTAACGACCCAAACCCACGGCTAGCAGATATTGTCCTCTTTGGGCTTTCTGCTCCCATACCTCTAAACAATGTTTGGTTCTCCTCCACAATCGACGTGGGATCTCACATTTGCCCAAGAAATTGGTTGGAAATATCTTTAATTTTTATAATAATCTTAAAAGTAGAGTAGAATAGGGTTAGGTAGTAACATTATGTTCGGGTTGGTTGGTTTGACCTCAATTTTTCAAAAAATTCAATCAAACCGAAGTTGAAAAAAAAAATCACACCAACCCAATTTTCATAGTTTAAGTTGGGTAATCTAGATTAGTCAGGTTGTGGAGTTATATGAACACCCTTAAAAATAAATCCCATTCGTTATTTCAATTAATTGACTAAGTCAAGTATTGCTGAAGTTGACTTGAAAGTCGTTAAGTCAAAAGATTTGTACGAGAACCAATAAATGAAAATTAATACGGAGGGTCTACCTTGAAAGTCGCGGCGTCTTGGTGTTGCTATACCGAAGCCTGCCATTTCCCAGTCACTGTTTATCCAAGAACTCCGATCAATTCACCAGGCACTGTTCCGTATGTTACGGTCCCTGCAACTCCGACAAATTCATCGGGTACCGTGCCTATTGTTACGGCCCCTGAAGCGCCGACTACACCAGGTAATGTTCCTGTTATTACGGCCCCTGAAGCTCCGACGACTTCACCAGGTACCGTTCCTATTGTTACGGCCCCTAAAGCTCCAAATTCACCAAGTACCATTCCGTATGTTACGGCCCCTAAAACTCCACCAACTCCAGTAGGTGTATATTCTCCAATCGGCTGACTTTCGGAATAAGCCCGTTAAAGCCCCATAATTGTATAAGTCTAATGTCTATGTATTTTAAGAAAATGATTTTGTTATTATAACAATAAATTGTCCCGCTACTCTTATAAGTACTCCTCCAAATATCAATATTTTTATCTAAGAAATACCAAGCATAGAGTGCAGGTTCTACCAAATATCTTATAATCTCTTCTTCGATTGGGGTTAATAAATAATATGAGTATTTCCCCGTTCAACATATAGATAGATTTATTGTTGTCTTGATCGTAATAATTTTGATAAAATTAATTCCGAAACAAATCATTTTTGTAATAATTTAGGTACAAATTTATATCATTGATTTTAGTAATAATTTGTGCACCATTTATTTTGCATAAAAAATTAATAAAATGCCTTAACTTTATATAATTTATCCAACCTATACTTAATTATAAATTTAGAAGTATTGAGATTAAATTAAGAAAATTGTTAATTTAAATTTCAAATTTTATTAATACATTTATATTTTTTAACTCGGGAATAATTTTTTAATTCTCTTATTTTATTTATCAAACTCTAAAACTACATCATGTTCTTTTTTTGTTTTATTTTTATTTGTGTTTTGATATTTATTATGAAATAATGTTTTTTTTATTTTAAAACTTGATTTATTATTAAATATAAATATAAATTTTATATTTAATAAATATTTTAAAGTTTTAATTTCAGATTCAATTATTAGGGTTTAAATCGTCTGAATTCAATTTCTCCCCAATTTTATTTTGAACCCGGAATTTCTATTTCTTCTTCTTCCTCCTCAATCGGTACTCTTTCTTCCCAAAATTTCTTTTGCTGCCTAGTTTTTGCACCAAATCTCATTGACGCCGGCCACCGGCGGTACAGTCTCCCCCGACCATATATCTTTGTAAGTTCTTCATTTTCCAAATGTTTTCTCTCTTCCCCTAAATGGGGGATTTTCGCGGACAATACGTTAAATTACTAATGTTTTTAGAGTAATCGGCAGAAGGATCCAGTGA

mRNA sequence

ATGAAGAAAACAGGTCTTTGCATTCTGGTGGCGGTGGCGATGGTGGCAGTTCTCACCGGAGCTCGTCTCGGGGAAGCAGTGACTTGCAACCCCATGGATCTGAGCTCATGTGTCGCTGCAATCACGTCGTCGGAGGCGCCTACACCGACTTGCTGCGCGAAGTTGAAGGAACAACAGTCATGCTATTTCACTGTTTATCCAAGAACTCCGATCAATTCACCAGGCACTGTTCCGTATGTTACGGTCCCTGCAACTCCGACAAATTCATCGGGTACCGTGCCTATTGTTACGGCCCCTGAAGCGCCGACTACACCAGGTAATGTTCCTGTTATTACGGCCCCTGAAGCTCCGACGACTTCACCAGGTACCGTTCCTATTGTTACGGCCCCTAAAGCTCCAAATTCACCAAGTACCATTCCGTATGTTACGGCCCCTAAAACTCCACCAACTCCATTTTTGCACCAAATCTCATTGACGCCGGCCACCGGCGGTACAGTCTCCCCCGACCATATATCTTTAGTAATCGGCAGAAGGATCCAGTGA

Coding sequence (CDS)

ATGAAGAAAACAGGTCTTTGCATTCTGGTGGCGGTGGCGATGGTGGCAGTTCTCACCGGAGCTCGTCTCGGGGAAGCAGTGACTTGCAACCCCATGGATCTGAGCTCATGTGTCGCTGCAATCACGTCGTCGGAGGCGCCTACACCGACTTGCTGCGCGAAGTTGAAGGAACAACAGTCATGCTATTTCACTGTTTATCCAAGAACTCCGATCAATTCACCAGGCACTGTTCCGTATGTTACGGTCCCTGCAACTCCGACAAATTCATCGGGTACCGTGCCTATTGTTACGGCCCCTGAAGCGCCGACTACACCAGGTAATGTTCCTGTTATTACGGCCCCTGAAGCTCCGACGACTTCACCAGGTACCGTTCCTATTGTTACGGCCCCTAAAGCTCCAAATTCACCAAGTACCATTCCGTATGTTACGGCCCCTAAAACTCCACCAACTCCATTTTTGCACCAAATCTCATTGACGCCGGCCACCGGCGGTACAGTCTCCCCCGACCATATATCTTTAGTAATCGGCAGAAGGATCCAGTGA

Protein sequence

MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQSCYFTVYPRTPINSPGTVPYVTVPATPTNSSGTVPIVTAPEAPTTPGNVPVITAPEAPTTSPGTVPIVTAPKAPNSPSTIPYVTAPKTPPTPFLHQISLTPATGGTVSPDHISLVIGRRIQ

Homology

[Close]

BLAST of Csor.00g194460 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-08
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 1  MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQS 60
          MK + +C +V VA+  +  G  + EAVTCNP +LSSCV AIT    P+ TCC+KLK Q+ 
Sbjct: 7  MKMSVVCAVVVVALFLIDVGP-VAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEP 66

Query: 61 CYFTVYPRTP-----INSPG 76
          C    Y + P     +NSPG
Sbjct: 67 CLCN-YIKNPSLKQYVNSPG 84

[Close]

BLAST of Csor.00g194460 vs. NCBI nr
Match: KAG6607060.1 (hypothetical protein SDJN03_00402, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 338 bits (868), Expect = 7.02e-117
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQS 60
           MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQS
Sbjct: 1   MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQS 60

Query: 61  CYFTVYPRTPINSPGTVPYVTVPATPTNSSGTVPIVTAPEAPTTPGNVPVITAPEAPTTS 120
           CYFTVYPRTPINSPGTVPYVTVPATPTNSSGTVPIVTAPEAPTTPGNVPVITAPEAPTTS
Sbjct: 61  CYFTVYPRTPINSPGTVPYVTVPATPTNSSGTVPIVTAPEAPTTPGNVPVITAPEAPTTS 120

Query: 121 PGTVPIVTAPKAPNSPSTIPYVTAPKTPPTPFLHQISLTPATGGTVSPDHISLVIGRRIQ 180
           PGTVPIVTAPKAPNSPSTIPYVTAPKTPPTPFLHQISLTPATGGTVSPDHISLVIGRRIQ
Sbjct: 121 PGTVPIVTAPKAPNSPSTIPYVTAPKTPPTPFLHQISLTPATGGTVSPDHISLVIGRRIQ 180

[Close]

BLAST of Csor.00g194460 vs. NCBI nr
Match: KAA0064158.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02871.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 8.92e-14
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 1  MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQS 60
          ++  GLC+LV VA+   LTG RLGEA +CNP +LS CV+AITSS APT  CC KL++Q+ 
Sbjct: 3  LQGPGLCLLVVVAIF--LTGVRLGEAASCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 62

Query: 61 CY 62
          CY
Sbjct: 63 CY 62

[Close]

BLAST of Csor.00g194460 vs. NCBI nr
Match: KGN53813.1 (hypothetical protein Csa_015036 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 1.29e-13
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 2  KKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQSC 61
          + TGLC+LV VA+   L+  RLGEAV+CNP +LS CV+AITSS APT  CC KL++Q+ C
Sbjct: 5  QGTGLCLLVVVAIF--LSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPC 63

[Close]

BLAST of Csor.00g194460 vs. NCBI nr
Match: XP_008444080.1 (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo] >KAA0064174.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 1.03e-12
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 1  MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQS 60
          ++ T L +LV VA+VA+LTGAR+ EAVTCN M LS C+ AITS+  P+ TCC+KL+EQQ 
Sbjct: 4  LRFTSLHLLV-VAIVALLTGARVAEAVTCNTMQLSPCIGAITSTAPPSTTCCSKLREQQP 63

Query: 61 CY 62
          C+
Sbjct: 64 CF 64

[Close]

BLAST of Csor.00g194460 vs. NCBI nr
Match: KAG6581741.1 (hypothetical protein SDJN03_21743, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581744.1 hypothetical protein SDJN03_21746, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.1 bits (170), Expect = 3.95e-12
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 1  MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEA-PTPTCCAKLKEQQ 60
          +  +GLC+LV   +VA+LTGA +GEAV+CNP +LS C++AITS+ A PT  CC KLK+QQ
Sbjct: 4  LHSSGLCLLV---LVAILTGAHVGEAVSCNPTELSPCLSAITSAGARPTVACCRKLKQQQ 63

Query: 61 SCY 62
           C+
Sbjct: 64 PCF 63

[Close]

BLAST of Csor.00g194460 vs. ExPASy TrEMBL
Match: A0A5D3BT00 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00780 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.32e-14
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 1  MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQS 60
          ++  GLC+LV VA+   LTG RLGEA +CNP +LS CV+AITSS APT  CC KL++Q+ 
Sbjct: 3  LQGPGLCLLVVVAIF--LTGVRLGEAASCNPTELSPCVSAITSSTAPTAACCQKLRQQEP 62

Query: 61 CY 62
          CY
Sbjct: 63 CY 62

[Close]

BLAST of Csor.00g194460 vs. ExPASy TrEMBL
Match: A0A0A0KW80 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141210 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.25e-14
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 2  KKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQSC 61
          + TGLC+LV VA+   L+  RLGEAV+CNP +LS CV+AITSS APT  CC KL++Q+ C
Sbjct: 5  QGTGLCLLVVVAIF--LSSVRLGEAVSCNPTELSPCVSAITSSTAPTAACCQKLRQQEPC 63

[Close]

BLAST of Csor.00g194460 vs. ExPASy TrEMBL
Match: A0A5A7VAB3 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G001020 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.00e-13
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 1  MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQS 60
          ++ T L +LV VA+VA+LTGAR+ EAVTCN M LS C+ AITS+  P+ TCC+KL+EQQ 
Sbjct: 4  LRFTSLHLLV-VAIVALLTGARVAEAVTCNTMQLSPCIGAITSTAPPSTTCCSKLREQQP 63

Query: 61 CY 62
          C+
Sbjct: 64 CF 64

[Close]

BLAST of Csor.00g194460 vs. ExPASy TrEMBL
Match: A0A1S3B931 (non-specific lipid-transfer protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487520 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.00e-13
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 1  MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQS 60
          ++ T L +LV VA+VA+LTGAR+ EAVTCN M LS C+ AITS+  P+ TCC+KL+EQQ 
Sbjct: 4  LRFTSLHLLV-VAIVALLTGARVAEAVTCNTMQLSPCIGAITSTAPPSTTCCSKLREQQP 63

Query: 61 CY 62
          C+
Sbjct: 64 CF 64

[Close]

BLAST of Csor.00g194460 vs. ExPASy TrEMBL
Match: A0A1R3KCA2 (AAI domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_09367 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.60e-12
Identity = 40/82 (48.78%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 2  KKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQSC 61
              LC++ A+A+V  L   R  EAVTC+  +LS CVAAITS  APT  CC+KLKEQ+ C
Sbjct: 5  SSVALCMVAALAVVVFLGETRTAEAVTCSVTELSPCVAAITSGSAPTGNCCSKLKEQKPC 64

Query: 62 YFTVYPRTPINSPGTVPYVTVP 83
           F  Y    IN+P   PY+  P
Sbjct: 65 -FCQY----INNPALKPYINSP 81

[Close]

BLAST of Csor.00g194460 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-09
Identity = 36/70 (51.43%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 1  MKKTGLCILVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQS 60
          M KT +  L A+A V ++  A   EAVTC+PM LS C  AITSS  P+  CCAKLKEQ+ 
Sbjct: 3  MIKTTMVSLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRP 62

Query: 61 CYFTVYPRTP 71
          C    Y R P
Sbjct: 63 C-LCGYMRNP 71

[Close]

BLAST of Csor.00g194460 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 9  LVAVAMVAVLTGARLGEAVTCNPMDLSSCVAAITSSEAPTPTCCAKLKEQQSCYFTVYPR 68
          ++A+A   +L    + E VTC+PM L+SC AA+TSS  P+  CC KL+EQQ C    Y R
Sbjct: 9  VLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPC-LCGYMR 68

Query: 69 TP 71
           P
Sbjct: 69 NP 69

[Close]

BLAST of Csor.00g194460 vs. TAIR 10
Match: AT4G22505.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 35/86 (40.70%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 67  PRTPINSPGTVPYVTVPATPTNSSGTVPIVTAPEA-PTTPGNVPVITAPEAPTTSPGTVP 126
           P++P NSP   P ++ P TP  S   VP ++ P   PT+P   P I  P  P+TSP   P
Sbjct: 124 PKSPPNSPPRAPPLSPPRTPPTSPPRVPPLSPPRTPPTSPPRAPPIPPPRTPSTSPPRAP 183

Query: 127 IVTAPKA-PNSPSTIPYVTAPKTPPT 151
            ++ P+  P SP   P V  P TPPT
Sbjct: 184 PLSPPRTPPTSPPRAPPVPPPNTPPT 209

The following BLAST results are available for this feature:

BLAST of Csor.00g194460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43681	1.4e-08	46.25	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]

BLAST of Csor.00g194460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607060.1	7.02e-117	100.00	hypothetical protein SDJN03_00402, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0064158.1	8.92e-14	59.68	non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02871....	[more]
KGN53813.1	1.29e-13	60.66	hypothetical protein Csa_015036 [Cucumis sativus]	[more]
XP_008444080.1	1.03e-12	59.68	PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis melo] >KAA0064174...	[more]
KAG6581741.1	3.95e-12	57.14	hypothetical protein SDJN03_21743, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Csor.00g194460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BT00	4.32e-14	59.68	Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0KW80	6.25e-14	60.66	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141210 PE=4 SV...	[more]
A0A5A7VAB3	5.00e-13	59.68	Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B931	5.00e-13	59.68	non-specific lipid-transfer protein 2-like OS=Cucumis melo OX=3656 GN=LOC1034875...	[more]
A0A1R3KCA2	5.60e-12	48.78	AAI domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_09367 PE=...	[more]

BLAST of Csor.00g194460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18280.1	2.8e-09	51.43	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G48750.1	1.2e-07	46.77	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G22505.1	1.2e-04	40.70	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 27..88 e-value: 2.6E-10 score: 42.4
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 28..68
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 3..68
None	No IPR available	PANTHER	PTHR33214:SF44	LIPID TRANSFER PROTEIN FAMILY PROTEIN-RELATED	coord: 3..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g194460.m01	Csor.00g194460.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport