Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDS single polypeptide start_codon stop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATG GAGACAGTAAAGAACGAAAATCATCGCTGGATTCAAACGATTTCGGTAACTGTAAAGCCGAATGATAATCGCAAGAAGCAAAACCTTGACGGAAAGAACAATCGGCTCTACGATTCTTCGATTCTTAGATTCTTCAGGATGTTTTTGCTTCTTGATCTTGATCGGAAGGCAGAGTACGGCAGCAAAGTGGAGGAGGCTTGGGAGCGGCAAGGAGGTGAGAGGACCGAGATCGAAGGCGAAGAGGAGGAGTTTGAAGTTTCCGAGCCAAGCGAGGAAGAAGGCAGTCGGACCGCCGAAATGGAAGGAGTGGAGATTCAGAGGAAGGAGGAGGAAGACGAAGAGGACGGGGAAGAGAGAGAGGAGCCGGGGAAGTCCCTTAGGGATTTTGGAAGCTACATAGTAAGAATAGCAAATGAGAGCAATGGCAATGGACCATACCTGGAGGAGGCTGGAGAGTTCGCCGTCCATTAG mRNA sequence
ATGGAGACAGTAAAGAACGAAAATCATCGCTGGATTCAAACGATTTCGGTAACTGTAAAGCCGAATGATAATCGCAAGAAGCAAAACCTTGACGGAAAGAACAATCGGCTCTACGATTCTTCGATTCTTAGATTCTTCAGGATGTTTTTGCTTCTTGATCTTGATCGGAAGGCAGAGTACGGCAGCAAAGTGGAGGAGGCTTGGGAGCGGCAAGGAGGTGAGAGGACCGAGATCGAAGGCGAAGAGGAGGAGTTTGAAGTTTCCGAGCCAAGCGAGGAAGAAGGCAGTCGGACCGCCGAAATGGAAGGAGTGGAGATTCAGAGGAAGGAGGAGGAAGACGAAGAGGACGGGGAAGAGAGAGAGGAGCCGGGGAAGTCCCTTAGGGATTTTGGAAGCTACATAGTAAGAATAGCAAATGAGAGCAATGGCAATGGACCATACCTGGAGGAGGCTGGAGAGTTCGCCGTCCATTAG Coding sequence (CDS)
ATGGAGACAGTAAAGAACGAAAATCATCGCTGGATTCAAACGATTTCGGTAACTGTAAAGCCGAATGATAATCGCAAGAAGCAAAACCTTGACGGAAAGAACAATCGGCTCTACGATTCTTCGATTCTTAGATTCTTCAGGATGTTTTTGCTTCTTGATCTTGATCGGAAGGCAGAGTACGGCAGCAAAGTGGAGGAGGCTTGGGAGCGGCAAGGAGGTGAGAGGACCGAGATCGAAGGCGAAGAGGAGGAGTTTGAAGTTTCCGAGCCAAGCGAGGAAGAAGGCAGTCGGACCGCCGAAATGGAAGGAGTGGAGATTCAGAGGAAGGAGGAGGAAGACGAAGAGGACGGGGAAGAGAGAGAGGAGCCGGGGAAGTCCCTTAGGGATTTTGGAAGCTACATAGTAAGAATAGCAAATGAGAGCAATGGCAATGGACCATACCTGGAGGAGGCTGGAGAGTTCGCCGTCCATTAG Protein sequence
METVKNENHRWIQTISVTVKPNDNRKKQNLDGKNNRLYDSSILRFFRMFLLLDLDRKAEYGSKVEEAWERQGGERTEIEGEEEEFEVSEPSEEEGSRTAEMEGVEIQRKEEEDEEDGEEREEPGKSLRDFGSYIVRIANESNGNGPYLEEAGEFAVH
Homology
BLAST of Csor.00g191130 vs. NCBI nr
Match:
KAG6607776.1 (hypothetical protein SDJN03_01118, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 302 bits (774), Expect = 2.66e-103
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query: 1 METVKNENHRWIQTISVTVKPNDNRKKQNLDGKNNRLYDSSILRFFRMFLLLDLDRKAEY 60 METVKNENHRWIQTISVTVKPNDNRKKQNLDGKNNRLYDSSILRFFRMFLLLDLDRKAEY Sbjct: 1 METVKNENHRWIQTISVTVKPNDNRKKQNLDGKNNRLYDSSILRFFRMFLLLDLDRKAEY 60 Query: 61 GSKVEEAWERQGGERTEIEGEEEEFEVSEPSEEEGSRTAEMEGVEIQRKEEEDEEDGEER 120 GSKVEEAWERQGGERTEIEGEEEEFEVSEPSEEEGSRTAEMEGVEIQRKEEEDEEDGEER Sbjct: 61 GSKVEEAWERQGGERTEIEGEEEEFEVSEPSEEEGSRTAEMEGVEIQRKEEEDEEDGEER 120 Query: 121 EEPGKSLRDFGSYIVRIANESNGNGPYLEEAGEFAVH 157 EEPGKSLRDFGSYIVRIANESNGNGPYLEEAGEFAVH Sbjct: 121 EEPGKSLRDFGSYIVRIANESNGNGPYLEEAGEFAVH 157
BLAST of Csor.00g191130 vs. NCBI nr
Match:
KAF7840556.1 (Acyl-CoA--sterol O-acyltransferase 1 [Senna tora])
HSP 1 Score: 53.1 bits (126), Expect = 3.24e-05
Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = 0
Query: 1 METVKNENHRWIQTISVTVKPNDNRKKQNLDG-------KNNRLYDSSILRFFRMFLLLD 60 ME ++NE ++ ++V V+ K NLD + RL SIL F ++ D Sbjct: 1 MEAIENEKKLGVEIVAVLVRFQHQGKNHNLDAVIEQRLVRIQRL-GMSILEFVVGWIFED 60 Query: 61 LDRKAEYGSKVEEAWERQGG--ERTEIEGEEEEFEVSEPSEEEGSRTAEMEGVEIQRKEE 120 D E G EA+E +G ER E EE+E EVSEPS+EEG T+EM V+I+RK + Sbjct: 61 FD--GERGES-NEAFEGEGRVRERAMAESEEQELEVSEPSDEEGESTSEMNRVKIERKTK 120 Query: 121 EDEEDGEEREEPGKSL 127 ++ D ++REE K Sbjct: 121 KEVNDRQKREESKKGF 132
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
KAG6607776.1 2.66e-103 100.00 hypothetical protein SDJN03_01118, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF7840556.1 3.24e-05 37.50 Acyl-CoA--sterol O-acyltransferase 1 [Senna tora] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
A T G G A G A C A G T A A A G A A C G A A A A T C A T C G C T G G A T T C A A A C G A T T T C G G T A A C T G T A A A G C C G A A T G A T A A T C G C A A G A A G C A A A A C C T T G A C G G A A A G A A C A A T C G G C T C T A C G A T T C T T C G A T T C T T A G A T T C T T C A G G A T G T T T T T G C T T C T T G A T C T T G A T C G G A A G G C A G A G T A C G G C A G C A A A G T G G A G G A G G C T T G G G A G C G G C A A G G A G G T G A G A G G A C C G A G A T C G A A G G C G A A G A G G A G G A G T T T G A A G T T T C C G A G C C A A G C G A G G A A G A A G G C A G T C G G A C C G C C G A A A T G G A A G G A G T G G A G A T T C A G A G G A A G G A G G A G G A A G A C G A A G A G G A C G G G G A A G A G A G A G A G G A G C C G G G G A A G T C C C T T A G G G A T T T T G G A A G C T A C A T A G T A A G A A T A G C A A A T G A G A G C A A T G G C A A T G G A C C A T A C C T G G A G G A G G C T G G A G A G T T C G C C G T C C A T T A G 50 100 150 200 250 300 350 400 450 Score = Score = Score = Score = Sequence Coil mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 101..121
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 91..106
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 63..127
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 63..77
Relationships
The following mRNA feature(s) are a part of this gene: