Csor.00g175850 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g175850
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr09: 1804745 .. 1806200 (-)
RNA-Seq ExpressionCsor.00g175850
SyntenyCsor.00g175850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTTGTAGAATCGAAGTTGACAGAAGAGAGTGAGCACACAGAGGCTTTTGGTATAACAATATGCCATTGCTCTTGCGTGCTCACTTCTCTGTCTGTCAGCTTCCATCGCCAATTCCTTCTTTTTTCCCCCCTAAATTCTCAATTTTCTTCCTTTTTTCTTGTCTAATTTTTGTTCATTGTTCATATATACTTCAATTATGATGGTTCATGTGAGAATTGAGATGGGTTTTGTGAAGTTGAGATGTAAATCAAATTTTTGGGCTCAATAATTCTCATTCAATTGGTTTTGATCTGAAAGTGGAAACCTAAATCCAGGTCTTGTTGTTCTTGTTCTTGTTCTTCTTTGGTTCTTTTATTTGAGGTTTAGAACAGAAGCTAATGGGGGAAGATCTACAAAAGAAAAGCACAAGATGATTCATTTATGCAGGTTTTGTCAACAATGAAACTGGTAATTTTAAATGTTCTATGTTTTAAGACAGCCGTACGTCAATTGCAGTGACAAAATAATATAATTAGTGGGATCTTTTTTTTTTTTTTTCTTACTTAATTTGGGAAAGTAATTATGACTTCATTGACTGCTTATATGTATCTCTTTTTGTTTTGGTCTTGTTCATCACTTTCATTTTGGTTGGAGGTCGAATCTCAGGCACATCAAGCTTGAATAACTATAAGTCAGGTGTTCAAGAGATTGGCGTTTGTGGTATATATTACTAGTTGCAGTCTACAAGCTTTTGCAAGCTCGAGGTATGTGATAAGCCTTTTCTATCAATGAAATAATGAACGATGTTTCTTTTTTTTTTTTTTAGTTCATTAAGTATGAAGCAAGAGATCGAACATTCAACTGTATGGAATGCTTAATCTGCATCTTATTCATGTTGAAGAATGTTCTTTTGAACGTAAGTCGAGTGATTTTTCATTTGAGCTTTAATCCATCGTCTTAAATAATAATCTATGAGTGATAAATTAAGTATTAGACATTTCTTGAGCTATCGAGGTTTATCATTGCTTATTCAGTCTTTCATCACAAGAAAAATAAATTGAGTATTAGACATTTCTTGAGCTATCGAGGTTTATCATTGCTTATTCAGTCTTTCATCACAAGAAAAATAAATTGAGTATTAGACATTTCTTGAGCTATCGAGGTTTATCATTGCTTATTCAGTCTTTCATCACAAGAAAAATCAAGTACTTGTGTGAAAGTTTGTTCTTCCATGGTGGATGATTTTATGAATATATTGTTTATGCCGCAGGGATAAGTATGTCTTGCTAAAATATTTTGTTATTAAGAAAGTTCTAATAATTTATTTGGATATAACTCGAAGAGGTCAATTGGTTCAATACTCGCTTCCAGTTTGATTTGGAAGTCAAGCGCACTATCATTGCACCACAGATCTCATGATAATGACATTTTCTTGATTCTGATTTATATGGTAGATAAGCAAGGACAATGA

mRNA sequence

ATGGTGTTTGTAGAATCGAAGTTGACAGAAGAGAGTGAGCACACAGAGGCTTTTGGTCTTGTTGTTCTTGTTCTTGTTCTTCTTTGGTTCTTTTATTTGAGGTTTAGAACAGAAGCTAATGGGGGAAGATCTACAAAAGAAAAGCACAAGATGATTCATTTATGCAGGTGTTCAAGAGATTGGCGTTTGTGGTATATATTACTAGTTGCAGTCTACAAGCTTTTGCAAGCTCGAGATAAGCAAGGACAATGA

Coding sequence (CDS)

ATGGTGTTTGTAGAATCGAAGTTGACAGAAGAGAGTGAGCACACAGAGGCTTTTGGTCTTGTTGTTCTTGTTCTTGTTCTTCTTTGGTTCTTTTATTTGAGGTTTAGAACAGAAGCTAATGGGGGAAGATCTACAAAAGAAAAGCACAAGATGATTCATTTATGCAGGTGTTCAAGAGATTGGCGTTTGTGGTATATATTACTAGTTGCAGTCTACAAGCTTTTGCAAGCTCGAGATAAGCAAGGACAATGA

Protein sequence

MVFVESKLTEESEHTEAFGLVVLVLVLLWFFYLRFRTEANGGRSTKEKHKMIHLCRCSRDWRLWYILLVAVYKLLQARDKQGQ
Homology
[Close]
BLAST of Csor.00g175850 vs. NCBI nr
Match: KAG6591539.1 (hypothetical protein SDJN03_13885, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 175 bits (443), Expect = 3.47e-55
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MVFVESKLTEESEHTEAFGLVVLVLVLLWFFYLRFRTEANGGRSTKEKHKMIHLCRCSRD 60
          MVFVESKLTEESEHTEAFGLVVLVLVLLWFFYLRFRTEANGGRSTKEKHKMIHLCRCSRD
Sbjct: 1  MVFVESKLTEESEHTEAFGLVVLVLVLLWFFYLRFRTEANGGRSTKEKHKMIHLCRCSRD 60

Query: 61 WRLWYILLVAVYKLLQARDKQGQ 83
          WRLWYILLVAVYKLLQARDKQGQ
Sbjct: 61 WRLWYILLVAVYKLLQARDKQGQ 83

[Close]
BLAST of Csor.00g175850 vs. NCBI nr
Match: KAG7024424.1 (hypothetical protein SDJN02_13239, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 67.0 bits (162), Expect = 7.72e-12
Identity = 36/55 (65.45%), Postives = 36/55 (65.45%), Query Frame = 0 

Query: 1  MVFVESKLTEESEHTEAFGLVVLVLVLLWFFYLRFRTEANGGRSTKEKHKMIHLC 55
          MVFVESKLTEESEHTEAF                   EANGGRSTKEKHKMIHLC
Sbjct: 1  MVFVESKLTEESEHTEAF-------------------EANGGRSTKEKHKMIHLC 36

The following BLAST results are available for this feature:
BLAST of Csor.00g175850 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g175850 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6591539.13.47e-55100.00hypothetical protein SDJN03_13885, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7024424.17.72e-1265.45hypothetical protein SDJN02_13239, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g175850 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g175850 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g175850.m01Csor.00g175850.m01mRNA