Csor.00g158200 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAGTCTCACGAATCTCAGCCCAAAGACGAGGCCCAATCCCTCCTCCACTCCAGCCACCGTCGGCCGCACCGCCGCTGGATCCATCTTCGGCGGAAGAGGCTGCCGATAGTCCGTCTTGGCGGCGAAAGGCCGCCTCGAGCGGCGGCGCATTGGAGGTCGATTCGATTTAGAAAATGGCTGATGAAGATCCGATGCGATTGTCTGGTGAAGAAACTGAAGCAATTGTTCGGAAAAGGCACTGGCAGCGGCGGCGACGGCGGCGGCGGATTTGATGCTTTTTTGAAAAGGATTCTGATGGAGATTTCTTTGGCCGTTCCTGTTCTTGGTGCCTCTCTCGCTTTTTAA ATGGCTCAGTCTCACGAATCTCAGCCCAAAGACGAGGCCCAATCCCTCCTCCACTCCAGCCACCGTCGGCCGCACCGCCGCTGGATCCATCTTCGGCGGAAGAGGCTGCCGATAGTCCGTCTTGGCGGCGAAAGGCCGCCTCGAGCGGCGGCGCATTGGAGGTCGATTCGATTTAGAAAATGGCTGATGAAGATCCGATGCGATTGTCTGGTGAAGAAACTGAAGCAATTGTTCGGAAAAGGCACTGGCAGCGGCGGCGACGGCGGCGGCGGATTTGATGCTTTTTTGAAAAGGATTCTGATGGAGATTTCTTTGGCCGTTCCTGTTCTTGGTGCCTCTCTCGCTTTTTAA ATGGCTCAGTCTCACGAATCTCAGCCCAAAGACGAGGCCCAATCCCTCCTCCACTCCAGCCACCGTCGGCCGCACCGCCGCTGGATCCATCTTCGGCGGAAGAGGCTGCCGATAGTCCGTCTTGGCGGCGAAAGGCCGCCTCGAGCGGCGGCGCATTGGAGGTCGATTCGATTTAGAAAATGGCTGATGAAGATCCGATGCGATTGTCTGGTGAAGAAACTGAAGCAATTGTTCGGAAAAGGCACTGGCAGCGGCGGCGACGGCGGCGGCGGATTTGATGCTTTTTTGAAAAGGATTCTGATGGAGATTTCTTTGGCCGTTCCTGTTCTTGGTGCCTCTCTCGCTTTTTAA MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIRFRKWLMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGASLAF Homology
BLAST of Csor.00g158200 vs. NCBI nr
Match: KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 234 bits (596), Expect = 1.75e-77 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Csor.00g158200 vs. NCBI nr
Match: KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 146 bits (368), Expect = 8.86e-43 Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 0
BLAST of Csor.00g158200 vs. NCBI nr
Match: KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146 bits (368), Expect = 8.86e-43 Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 0
BLAST of Csor.00g158200 vs. NCBI nr
Match: KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa]) HSP 1 Score: 103 bits (256), Expect = 7.57e-26 Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 0
BLAST of Csor.00g158200 vs. NCBI nr
Match: KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus]) HSP 1 Score: 98.6 bits (244), Expect = 1.94e-23 Identity = 58/118 (49.15%), Postives = 73/118 (61.86%), Query Frame = 0
BLAST of Csor.00g158200 vs. ExPASy TrEMBL
Match: A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1) HSP 1 Score: 103 bits (256), Expect = 3.66e-26 Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 0
BLAST of Csor.00g158200 vs. ExPASy TrEMBL
Match: A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1) HSP 1 Score: 101 bits (251), Expect = 2.17e-25 Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 0
BLAST of Csor.00g158200 vs. ExPASy TrEMBL
Match: A0A1S4CG75 (uncharacterized protein LOC107818456 OS=Nicotiana tabacum OX=4097 GN=LOC107818456 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.36e-13 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of Csor.00g158200 vs. ExPASy TrEMBL
Match: A0A314L938 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_04104 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.34e-12 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of Csor.00g158200 vs. ExPASy TrEMBL
Match: A0A314KW50 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_38285 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 8.58e-12 Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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