Csor.00g158200 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g158200
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionReceptor-type tyrosine-protein like
LocationCsor_Chr08: 5087960 .. 5088310 (-)
RNA-Seq ExpressionCsor.00g158200
SyntenyCsor.00g158200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAGTCTCACGAATCTCAGCCCAAAGACGAGGCCCAATCCCTCCTCCACTCCAGCCACCGTCGGCCGCACCGCCGCTGGATCCATCTTCGGCGGAAGAGGCTGCCGATAGTCCGTCTTGGCGGCGAAAGGCCGCCTCGAGCGGCGGCGCATTGGAGGTCGATTCGATTTAGAAAATGGCTGATGAAGATCCGATGCGATTGTCTGGTGAAGAAACTGAAGCAATTGTTCGGAAAAGGCACTGGCAGCGGCGGCGACGGCGGCGGCGGATTTGATGCTTTTTTGAAAAGGATTCTGATGGAGATTTCTTTGGCCGTTCCTGTTCTTGGTGCCTCTCTCGCTTTTTAA

mRNA sequence

ATGGCTCAGTCTCACGAATCTCAGCCCAAAGACGAGGCCCAATCCCTCCTCCACTCCAGCCACCGTCGGCCGCACCGCCGCTGGATCCATCTTCGGCGGAAGAGGCTGCCGATAGTCCGTCTTGGCGGCGAAAGGCCGCCTCGAGCGGCGGCGCATTGGAGGTCGATTCGATTTAGAAAATGGCTGATGAAGATCCGATGCGATTGTCTGGTGAAGAAACTGAAGCAATTGTTCGGAAAAGGCACTGGCAGCGGCGGCGACGGCGGCGGCGGATTTGATGCTTTTTTGAAAAGGATTCTGATGGAGATTTCTTTGGCCGTTCCTGTTCTTGGTGCCTCTCTCGCTTTTTAA

Coding sequence (CDS)

ATGGCTCAGTCTCACGAATCTCAGCCCAAAGACGAGGCCCAATCCCTCCTCCACTCCAGCCACCGTCGGCCGCACCGCCGCTGGATCCATCTTCGGCGGAAGAGGCTGCCGATAGTCCGTCTTGGCGGCGAAAGGCCGCCTCGAGCGGCGGCGCATTGGAGGTCGATTCGATTTAGAAAATGGCTGATGAAGATCCGATGCGATTGTCTGGTGAAGAAACTGAAGCAATTGTTCGGAAAAGGCACTGGCAGCGGCGGCGACGGCGGCGGCGGATTTGATGCTTTTTTGAAAAGGATTCTGATGGAGATTTCTTTGGCCGTTCCTGTTCTTGGTGCCTCTCTCGCTTTTTAA

Protein sequence

MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIRFRKWLMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGASLAF
Homology
BLAST of Csor.00g158200 vs. NCBI nr
Match: KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 234 bits (596), Expect = 1.75e-77
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0

Query: 1   MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIRFRK 60
           MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIRFRK
Sbjct: 1   MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIRFRK 60

Query: 61  WLMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGASLAF 116
           WLMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGASLAF
Sbjct: 61  WLMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGASLAF 116

BLAST of Csor.00g158200 vs. NCBI nr
Match: KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146 bits (368), Expect = 8.86e-43
Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 0

Query: 1   MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIR--- 60
           MAQS+ESQ +DEAQ LL S HRRP RRWIHLRRK+L   RLGG RPPRAA  WRSIR   
Sbjct: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60

Query: 61  FRKWLMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGAS 113
            RKWLMK+RCDC VKK+ +LF K  G       GF+ FLKRILMEIS AVPVLGAS
Sbjct: 61  MRKWLMKVRCDCKVKKINELFDKDNG-------GFNGFLKRILMEISSAVPVLGAS 109

BLAST of Csor.00g158200 vs. NCBI nr
Match: KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146 bits (368), Expect = 8.86e-43
Identity = 80/116 (68.97%), Postives = 87/116 (75.00%), Query Frame = 0

Query: 1   MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIR--- 60
           MAQS+ESQ +DEAQ LL S HRRP RRWIHLRRK+L   RLGG RPPRAA  WRSIR   
Sbjct: 1   MAQSYESQLQDEAQPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRKVR 60

Query: 61  FRKWLMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGAS 113
            RKWLMK+RCDC VKK+ +LF K  G       GF+ FLKRILMEIS AVPVLGAS
Sbjct: 61  MRKWLMKVRCDCKVKKMNELFDKDNG-------GFNGFLKRILMEISSAVPVLGAS 109

BLAST of Csor.00g158200 vs. NCBI nr
Match: KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (256), Expect = 7.57e-26
Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 0

Query: 1   MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIR--- 60
           M +S++ + +DEA+SLL S +RRP RRWI LRRK+LP  RLGG RPPR  A WRSI+   
Sbjct: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60

Query: 61  FRKWL----MKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGAS 115
            RKW     MK+RC  +                    GF+AFLK+IL+EISLA+P+LG S
Sbjct: 61  MRKWAAMMTMKVRCKDIA-------------------GFNAFLKKILLEISLAIPLLGVS 103

BLAST of Csor.00g158200 vs. NCBI nr
Match: KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 1.94e-23
Identity = 58/118 (49.15%), Postives = 73/118 (61.86%), Query Frame = 0

Query: 4   SHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIR---FRK 63
           S+E + +DEA+SLL S +RRP RRWI LRRK+LP  RLGG RPPR AA WRSI+    RK
Sbjct: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64

Query: 64  WLM----KIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGASL 114
           W M    K+RC  +                     F+AFL++IL+EISLA+P+LG  L
Sbjct: 65  WAMTMTNKVRCKDIAS-------------------FNAFLRKILLEISLAIPLLGDGL 103

BLAST of Csor.00g158200 vs. ExPASy TrEMBL
Match: A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1)

HSP 1 Score: 103 bits (256), Expect = 3.66e-26
Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 0

Query: 1   MAQSHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIR--- 60
           M +S++ + +DEA+SLL S +RRP RRWI LRRK+LP  RLGG RPPR  A WRSI+   
Sbjct: 1   MRESYKLEAQDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKEIK 60

Query: 61  FRKWL----MKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGAS 115
            RKW     MK+RC  +                    GF+AFLK+IL+EISLA+P+LG S
Sbjct: 61  MRKWAAMMTMKVRCKDIA-------------------GFNAFLKKILLEISLAIPLLGVS 103

BLAST of Csor.00g158200 vs. ExPASy TrEMBL
Match: A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1)

HSP 1 Score: 101 bits (251), Expect = 2.17e-25
Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 0

Query: 4   SHESQPKDEAQSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRSIR---FRK 63
           S+E + +DEA+SLL S +RRP RRWI LRRK+LP  RLGG RPPR AA WRSI+    RK
Sbjct: 5   SYELEAEDEAKSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMRK 64

Query: 64  WLM----KIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGASLA 115
           W M    K+RC  +                     F+AFL++IL+EISLA+P+LG SL+
Sbjct: 65  WAMTMTNKVRCKDIAS-------------------FNAFLRKILLEISLAIPLLGVSLS 104

BLAST of Csor.00g158200 vs. ExPASy TrEMBL
Match: A0A1S4CG75 (uncharacterized protein LOC107818456 OS=Nicotiana tabacum OX=4097 GN=LOC107818456 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.36e-13
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 0

Query: 24  PHRRWIHLRRKRLPIVRLGGERPPRAAAH----WRSIRFRKWLMKIRCDCLVKKLKQLFG 83
           P RR I  R+KRLP VRLGGE+ PR        +R +R  KWL K+   C++K+LK+ + 
Sbjct: 26  PSRRKITFRKKRLPTVRLGGEKNPRRGFSVVKLFRRVRL-KWL-KLHYTCMLKRLKEYYQ 85

Query: 84  KGTGSGGDGGGGFDAFLKRILMEISLAVPVLGAS 113
                  + GG  DAF +R+L+E S AVPV+G S
Sbjct: 86  SAVKDIMESGGALDAFQQRLLLETSFAVPVMGLS 117

BLAST of Csor.00g158200 vs. ExPASy TrEMBL
Match: A0A314L938 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_04104 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.34e-12
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 0

Query: 24  PHRRWIHLRRKRLPIVRLGGERPPRAAAH----WRSIRFRKWLMKIRCDCLVKKLKQLFG 83
           P RR I  R+KRLP VRLGGE+ PR        +R +R  KWL K+   C++KKLK+ + 
Sbjct: 26  PARRKITFRKKRLPTVRLGGEKNPRRGFSVVKLFRRVRL-KWL-KLHYTCMLKKLKEYYQ 85

Query: 84  KGTGSGGDGGGGFDAFLKRILMEISLAVPVLGAS 113
                  + GG  +AF +R+L+E S AVPV+G S
Sbjct: 86  SAVKDIIESGGSLNAFQQRLLLETSFAVPVMGLS 117

BLAST of Csor.00g158200 vs. ExPASy TrEMBL
Match: A0A314KW50 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_38285 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 8.58e-12
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0

Query: 26  RRW---IHLRRKRLPIVRLGGERPPRAAAHWRSIRFRKWLMKIRCDCLVKKLKQLFGKGT 85
           RRW   I  R+KRLP+VRLGGE+ PR     R     K   +++  C++KKLKQ +    
Sbjct: 25  RRWRQKISFRKKRLPMVRLGGEKKPR-----RGFILVKLFRRVKLKCILKKLKQYYRSLV 84

Query: 86  GSGGDGGGGFDAFLKRILMEISLAVPVLGAS 113
               DGGG  ++  +R+++E S AVPV+G S
Sbjct: 85  KHIVDGGGALESLRQRLILETSFAVPVMGLS 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6593556.11.75e-77100.00hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7013982.18.86e-4368.97hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6575440.18.86e-4368.97hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0059393.17.57e-2649.18hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK039... [more]
KAE8646502.11.94e-2349.15hypothetical protein Csa_015773 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5A7UTZ43.66e-2649.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KCH42.17e-2549.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1[more]
A0A1S4CG753.36e-1344.68uncharacterized protein LOC107818456 OS=Nicotiana tabacum OX=4097 GN=LOC10781845... [more]
A0A314L9381.34e-1244.68Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_04104 PE=4 SV=1[more]
A0A314KW508.58e-1241.76Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_38285 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR34788:SF4F15I1.22coord: 1..115
NoneNo IPR availablePANTHERPTHR34788F15I1.22coord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g158200.m01Csor.00g158200.m01mRNA