Csor.00g151700 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g151700
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 3885803 .. 3888411 (+)
RNA-Seq ExpressionCsor.00g151700
SyntenyCsor.00g151700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGTATGATAGCGCATGGGGGAGGTACGTGGTCCTAAAGGATTGGGCGCCCTACCTACTTTTGACTGTTGAAATGGATTGGGAGGAAACAAGTAAAATAGAAGAAAAAAGTAAATAAATAAATAAATAAATAAAAATAATAATAATAACAAACAAACAAATAAATAATATATCCTTTAATTTAATGCCCCATAAATATAACTGTGGTCCCTTCTATTCCATTGGCTACCTAGCTTTTCTTTCTTTTCCTAAATTTCATTTTATTTTTTTCTTGTCCTTCCAAAATTTAAAATAAGTAAATTACGCAAAATACTTAATTTTCAACTAATTTTCAATTTTTCTTCGAATTTTTTAATGACTTTTTTTTTAATTTTTATTTTTAATATCGGAGTGTCCGAAAAATCTTTTAGACCAACTCGAAATTTCGATTTGATTGGGTACATGACCCGAACAACTTGAATAGAGTTCATAATCCAACTCAAAACCTTTTATTTTTTGGTTGGGTTGTCTATTTTATTTTAATTATTTTAAAAATTCTACTGATCCAAATAACTCGATATTGAAATATAATATTTAGAGTATATATTATTTATAGAATATATCTTAATATTCTTTATTTATGATTTGATTTACAATATATTTTATTTTATTATTTTATATTTTCCTCCTTTGTACATGCTAGCTTGTATATTTATTTAAAAGATATCAATATCAACGAAAATACACACCTTCCCAATTCTATTTCTATTTCTATTTCTCATTCTTAACACATGGTATTAGAGCATCATTTTTAACACTCGACCCAAAAAAAATTCAACTTGTGAACTGACTCGAATTTTCGAATTTTCTAAAAAATATTAGTTTTTCACTAATAAAATTTTGAAAATATATTAACATTATTATTATTAGTTCACCGAATTTAATAAAATGTAACTCCCAAGTAAAATATAATGGTGTTGAAATGAAATATTTATTTTTTAAGAGTTTAGGGGCGAAAATGAAATATTCATAAAACTTAAGGCTAAAAGTGAAATAATTTTTTGGAGTAAAATGAAATGGGAATGAATAGGTGGGTGAATTTGGCAATGGACCACGTAAATGGGAAATGCTGGCATCATTCCATTCTCTGCGTTTGATAGGGAAATTTCAAGGCAGTCCCTAACGCCTTCCCTTCCCCTTCTGCCAATTCCATCTTTTTATTCTTTTTAACATTTAACCCTTTAACTTGGATGCTATGCTTTGCATTGCTTACATCACCTCTTCCTCCTATTTTTATTCCAATTTAAGGTATTTCATTTTCTCATTTTTTATACCTATTTTTACGGGTCGAGAATTATTGAAATCAGTAGTCCGAGGAAGATCATAGGTTTATGAGTAAAAAATACAACCTCTATTGTTATGAAGGTTTCTCGGGAAATCAATCTTTTAACTTAATCATGTCAATAAAATTCTCAGGTGTCTGTTGGATGAAAGTCCCACCTCCGCTAATTTAAGGAATGATCCCGACTGTCTTCATTCAAATGAGGCCTTTTGTAGAAGCGCAAAGCAAAGCCATGAGAGCTTATGCGCAAAGTGGACAATATCATACCATTGTGGAGACTCGTGTTCATTTAATATGGTATCAAAGTGATGCCCTAAACTTAGACATGTCAATAGAATCCTCAAATGTCGAACAAAATATTGTGAGCCTCGAAAGCATAGTAAAAAAATGACTAAGACTCGAGCCTCGATTAAGGAGAGACGTACTTTGTTCGAGGGGAGATGTTGGATGAAAGTCCTTCGTTGGCTAATATGTGTAAATTACAAGTTTGTGAATTTCGACAGCGATTAAGGGGAGGCGTACTTTGTTCGAGGAGATGTTGGATGAAAGTCCCACGTCAGCTAATATGTGTAAATTACAAGTTTGTGAATTTCGACGTGACTCGAATGTCGAATAAATGGTATATTTTGTTCAAGGGCTCTAGAGAAGGAGCGATCATGAGAGGCTCGACCATGTAGCCGAGATTCAGTGATATTCTTATTTACGTAAAAAATAAGACTAAATAACGAGTTTAGTCTCGGAAGTTATATGAGTTTTATTTAGTAAAATCTTATTATGGTTACTATATTGCGGAAATTTTGAATATGTAGTATTTTTAAATAATTAATTAGAAACTATCAAAGTTAGGGTATATATTACGGCCCATTTTGATTTACCCACCAACTGGGTAGTTATGCACGCTGAAATGGGCCGGGCCAAAAGGCCCATTTAATAGTACTTCCTCTGGCTTGGGGTATAAAACGAATGAACATTGAAAACCCAAACTTAGAGGGAACATTTCGTAGAACATATTTGACTGGCGAGTTTCAGAGCGCGAAGGCACTCGCAAGCGGTATTCCGATCATCAATGGCTACTTATCGATCTCGCATTGAACGACTTCGTTGATGCCGAGGGAATCGTAAGTAAGTCGAGGTTTGCAGTAGAAGAATACGCCGTCCGATTGCCTTCCGGCGGTCGTACTCGAGATCTCTTCATTCATTCTCCCGGTAACGCTATCATTTCTTCTTACGGTGCGAAGGATTCATCTGGTTTTGATAATTTATTCTGTTTTCCAGTGTTTGCGTAG

mRNA sequence

ATGCGGTATGATAGCGCATGGGGGAGGTACGTGGTCCTAAAGGATTGGGCGCCCTACCTACTTTTGACTGTTGAAATGGATTGGGAGGAAACAAAGCGCGAAGGCACTCGCAAGCGGTATTCCGATCATCAATGGCTACTTATCGATCTCGCATTGAACGACTTCGTTGATGCCGAGGGAATCGTAAGTAAGTCGAGGTTTGCAGTAGAAGAATACGCCGTCCGATTGCCTTCCGGCGGTCGTACTCGAGATCTCTTCATTCATTCTCCCGGTAACGCTATCATTTCTTCTTACGGTGCGAAGGATTCATCTGGTTTTGATAATTTATTCTGTTTTCCAGTGTTTGCGTAG

Coding sequence (CDS)

ATGCGGTATGATAGCGCATGGGGGAGGTACGTGGTCCTAAAGGATTGGGCGCCCTACCTACTTTTGACTGTTGAAATGGATTGGGAGGAAACAAAGCGCGAAGGCACTCGCAAGCGGTATTCCGATCATCAATGGCTACTTATCGATCTCGCATTGAACGACTTCGTTGATGCCGAGGGAATCGTAAGTAAGTCGAGGTTTGCAGTAGAAGAATACGCCGTCCGATTGCCTTCCGGCGGTCGTACTCGAGATCTCTTCATTCATTCTCCCGGTAACGCTATCATTTCTTCTTACGGTGCGAAGGATTCATCTGGTTTTGATAATTTATTCTGTTTTCCAGTGTTTGCGTAG

Protein sequence

MRYDSAWGRYVVLKDWAPYLLLTVEMDWEETKREGTRKRYSDHQWLLIDLALNDFVDAEGIVSKSRFAVEEYAVRLPSGGRTRDLFIHSPGNAIISSYGAKDSSGFDNLFCFPVFA
Homology
[Close]
BLAST of Csor.00g151700 vs. NCBI nr
Match: KAG6581128.1 (hypothetical protein SDJN03_21130, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 244 bits (623), Expect = 1.33e-81
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MRYDSAWGRYVVLKDWAPYLLLTVEMDWEETKREGTRKRYSDHQWLLIDLALNDFVDAEG 60
           MRYDSAWGRYVVLKDWAPYLLLTVEMDWEETKREGTRKRYSDHQWLLIDLALNDFVDAEG
Sbjct: 1   MRYDSAWGRYVVLKDWAPYLLLTVEMDWEETKREGTRKRYSDHQWLLIDLALNDFVDAEG 60

Query: 61  IVSKSRFAVEEYAVRLPSGGRTRDLFIHSPGNAIISSYGAKDSSGFDNLFCFPVFA 116
           IVSKSRFAVEEYAVRLPSGGRTRDLFIHSPGNAIISSYGAKDSSGFDNLFCFPVFA
Sbjct: 61  IVSKSRFAVEEYAVRLPSGGRTRDLFIHSPGNAIISSYGAKDSSGFDNLFCFPVFA 116

[Close]
BLAST of Csor.00g151700 vs. NCBI nr
Match: KAG6588869.1 (hypothetical protein SDJN03_17434, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 55.8 bits (133), Expect = 2.39e-07
Identity = 28/46 (60.87%), Postives = 30/46 (65.22%), Query Frame = 0 

Query: 70  EEYAVRLPSGGRTRDLFIHSPGNAIISSYGAKDSSGFDNLFCFPVF 115
           E+ AVRLP G   R+L  HSPGNA  SSY AKD S  D  F FPVF
Sbjct: 51  EDNAVRLPYGRSIRELLFHSPGNAFSSSYVAKDYSDLDIFFSFPVF 96

The following BLAST results are available for this feature:
BLAST of Csor.00g151700 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g151700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581128.11.33e-81100.00hypothetical protein SDJN03_21130, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6588869.12.39e-0760.87hypothetical protein SDJN03_17434, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g151700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g151700 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g151700.m01Csor.00g151700.m01mRNA