Csor.00g124240 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g124240
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 11866311 .. 11867064 (+)
RNA-Seq ExpressionCsor.00g124240
SyntenyCsor.00g124240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATCGGCGATCAGCTTTCCAACCGTCCGCCGTGTTCTCCATGACTATCAAAAAAGCGACCTCAAAGGCTTCAAGCTCCTCTGTTGTCCACCGTCGAAAACCTTGGGAAGGAGAACAAGAATCATAAAATGGTACCGTTCTTTCGCCGTTGTTGTCTCCATTAGAAGGCAAATTTACGGTCGGGTTCGCTGGGTTTTCTAACGGCTCTAGCATAAAAGTACCTTGACCGAAAAAATTAGGGTTTACTGAGAAGCTCCGACGTTTAAAAACCTTAATTTGAAGAATTTGGGTTTATTGTCGGAAGCTCCGACATACAAAAATCTTGATCGGAAAAATTATGGATTATTACTGGAAGCTACGACGTACAAATCATTACGGGAAGCTCCTCCATACAAAACTTTTGTCTAAAGAATTAAGATTTATTATCGGAAGCTCGGGTATATAAAAACGGTGATATGAGAAATTAGGATTTATTAACGGTTTATTTTAACTCATAAATGTTTTTTTTTTTTTTGTATAGTTATGTTATTTCTGATTTTGTGGGGTTGAATATATTTACTAAATCACACCATACTCAAAAGTACCTTAATGAATGAGATAATATAAAGGAAAATCGAAAGAGACAGAGTATCCACGATATAACATCGTCGATCCGATATTATTGATGTAGGTACGTGCTCGTCTAGGACTACCCGGTGAAGAGTTTGCCGCCAAAAGAATCGCTACCGCCGGCGGCGGCCATTGCCATTAG

mRNA sequence

ATGAGATCGGCGATCAGCTTTCCAACCGTCCGCCGTGTTCTCCATGACTATCAAAAAAGCGACCTCAAAGGCTTCAAGCTCCTCTGTTGTCCACCGTCGAAAACCTTGGGAAGGAGAACAAGAATCATAAAATGGTACCGTTCTTTCGCCGTTGTTGTCTCCATTAGAAGGCAAATTTACGGTCGGGTACGTGCTCGTCTAGGACTACCCGGTGAAGAGTTTGCCGCCAAAAGAATCGCTACCGCCGGCGGCGGCCATTGCCATTAG

Coding sequence (CDS)

ATGAGATCGGCGATCAGCTTTCCAACCGTCCGCCGTGTTCTCCATGACTATCAAAAAAGCGACCTCAAAGGCTTCAAGCTCCTCTGTTGTCCACCGTCGAAAACCTTGGGAAGGAGAACAAGAATCATAAAATGGTACCGTTCTTTCGCCGTTGTTGTCTCCATTAGAAGGCAAATTTACGGTCGGGTACGTGCTCGTCTAGGACTACCCGGTGAAGAGTTTGCCGCCAAAAGAATCGCTACCGCCGGCGGCGGCCATTGCCATTAG

Protein sequence

MRSAISFPTVRRVLHDYQKSDLKGFKLLCCPPSKTLGRRTRIIKWYRSFAVVVSIRRQIYGRVRARLGLPGEEFAAKRIATAGGGHCH
Homology
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BLAST of Csor.00g124240 vs. NCBI nr
Match: KAG6581825.1 (hypothetical protein SDJN03_21827, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184 bits (467), Expect = 1.08e-58
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MRSAISFPTVRRVLHDYQKSDLKGFKLLCCPPSKTLGRRTRIIKWYRSFAVVVSIRRQIY 60
          MRSAISFPTVRRVLHDYQKSDLKGFKLLCCPPSKTLGRRTRIIKWYRSFAVVVSIRRQIY
Sbjct: 1  MRSAISFPTVRRVLHDYQKSDLKGFKLLCCPPSKTLGRRTRIIKWYRSFAVVVSIRRQIY 60

Query: 61 GRVRARLGLPGEEFAAKRIATAGGGHCH 88
          GRVRARLGLPGEEFAAKRIATAGGGHCH
Sbjct: 61 GRVRARLGLPGEEFAAKRIATAGGGHCH 88

The following BLAST results are available for this feature:
BLAST of Csor.00g124240 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g124240 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581825.11.08e-58100.00hypothetical protein SDJN03_21827, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g124240 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g124240 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g124240.m01Csor.00g124240.m01mRNA