Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGTAACTATGGCGCTTACACGAACCAGATCTCATCTCAGAGACCACTGGCCATCGTCTTGGCTCTTGCTTCTGCTGTGGTGCTTTCACCATTAAGACCTTATGAATCCAGATGGAGCTCTGGATTTGTTCTTCCACTGGTTCTTTTGGTGCTTATAATCGCCATTAAGACATCTTCGTCTTGCTCATCCATGTCCACGGACAGAAGGGAGAGAGATTCTGCAATTCTCTCGTCAGATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCCTGGGGACTTGCAGGGCTTTTAATGATGTTGATTTTCGGGCTTTCTTGGCAGAGTTCTGTTAAAGAATTCCTCTGGAGATAG
mRNA sequence
ATGGATAGTAACTATGGCGCTTACACGAACCAGATCTCATCTCAGAGACCACTGGCCATCGTCTTGGCTCTTGCTTCTGCTGTGGTGCTTTCACCATTAAGACCTTATGAATCCAGATGGAGCTCTGGATTTGTTCTTCCACTGGTTCTTTTGGTGCTTATAATCGCCATTAAGACATCTTCGTCTTGCTCATCCATGTCCACGGACAGAAGGGAGAGAGATTCTGCAATTCTCTCGTCAGATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCCTGGGGACTTGCAGGGCTTTTAATGATGTTGATTTTCGGGCTTTCTTGGCAGAGTTCTGTTAAAGAATTCCTCTGGAGATAG
Coding sequence (CDS)
ATGGATAGTAACTATGGCGCTTACACGAACCAGATCTCATCTCAGAGACCACTGGCCATCGTCTTGGCTCTTGCTTCTGCTGTGGTGCTTTCACCATTAAGACCTTATGAATCCAGATGGAGCTCTGGATTTGTTCTTCCACTGGTTCTTTTGGTGCTTATAATCGCCATTAAGACATCTTCGTCTTGCTCATCCATGTCCACGGACAGAAGGGAGAGAGATTCTGCAATTCTCTCGTCAGATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCCTGGGGACTTGCAGGGCTTTTAATGATGTTGATTTTCGGGCTTTCTTGGCAGAGTTCTGTTAAAGAATTCCTCTGGAGATAG
Protein sequence
MDSNYGAYTNQISSQRPLAIVLALASAVVLSPLRPYESRWSSGFVLPLVLLVLIIAIKTSSSCSSMSTDRRERDSAILSSDPSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR
Homology
BLAST of Csor.00g124110 vs. NCBI nr
Match:
KAG6581812.1 (hypothetical protein SDJN03_21814, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 227 bits (579), Expect = 7.96e-75
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
Query: 1 MDSNYGAYTNQISSQRPLAIVLALASAVVLSPLRPYESRWSSGFVLPLVLLVLIIAIKTS 60
MDSNYGAYTNQISSQRPLAIVLALASAVVLSPLRPYESRWSSGFVLPLVLLVLIIAIKTS
Sbjct: 1 MDSNYGAYTNQISSQRPLAIVLALASAVVLSPLRPYESRWSSGFVLPLVLLVLIIAIKTS 60
Query: 61 SSCSSMSTDRRERDSAILSSDPSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR 118
SSCSSMSTDRRERDSAILSSDPSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR
Sbjct: 61 SSCSSMSTDRRERDSAILSSDPSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR 118
BLAST of Csor.00g124110 vs. NCBI nr
Match:
KAE8637311.1 (hypothetical protein CSA_023553, partial [Cucumis sativus])
HSP 1 Score: 178 bits (451), Expect = 2.54e-55
Identity = 98/119 (82.35%), Postives = 103/119 (86.55%), Query Frame = 0
Query: 1 MDSNYGAYTNQISSQRPLAIVLALASAVVLSPLRPYESRWSSGFVLPLVLLVLIIAIKTS 60
MDSNY AY NQ SSQRPLAI LALASAVVLSPLR YE+ WSSGFV+PLVLL LI+AIKTS
Sbjct: 4 MDSNYSAYANQNSSQRPLAIFLALASAVVLSPLRSYETSWSSGFVVPLVLLGLIVAIKTS 63
Query: 61 SSCSSMSTDRRERDSAILSSD-PSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR 118
SSCSS S RDSAIL SD PSWVLKIGSSSWGLAG+LMMLI GLSWQSSV+EFLWR
Sbjct: 64 SSCSSTS-----RDSAILPSDHPSWVLKIGSSSWGLAGILMMLILGLSWQSSVQEFLWR 117
BLAST of Csor.00g124110 vs. NCBI nr
Match:
KAA0058525.1 (putative transmembrane protein [Cucumis melo var. makuwa] >TYK07220.1 putative transmembrane protein [Cucumis melo var. makuwa])
HSP 1 Score: 173 bits (438), Expect = 2.21e-53
Identity = 97/119 (81.51%), Postives = 101/119 (84.87%), Query Frame = 0
Query: 1 MDSNYGAYTNQISSQRPLAIVLALASAVVLSPLRPYESRWSSGFVLPLVLLVLIIAIKTS 60
MDSNY AY NQ SS RPLAIVLALASAV LSPLR YE+ WSSGFV+PLVLL LIIAIKTS
Sbjct: 1 MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTS 60
Query: 61 SSCSSMSTDRRERDSAILSSD-PSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR 118
S CSS S RDSAIL SD PSWVLKIGSSSWGLAG+LMMLI GLSWQSSV+EFLWR
Sbjct: 61 SCCSSTS-----RDSAILPSDHPSWVLKIGSSSWGLAGILMMLILGLSWQSSVQEFLWR 114
BLAST of Csor.00g124110 vs. NCBI nr
Match:
XP_030969466.1 (uncharacterized protein LOC115989757 [Quercus lobata])
HSP 1 Score: 141 bits (356), Expect = 9.01e-41
Identity = 79/119 (66.39%), Postives = 93/119 (78.15%), Query Frame = 0
Query: 8 YTNQISSQRPLAIVLALASAVVLSPL--------RPYESRWSSGFVLPLVLLVLIIAIKT 67
YT+Q SSQR +A+VLAL SA+VLSPL R YE++WSSGFVLP+VL LIIAIKT
Sbjct: 6 YTSQYSSQRSVAMVLALVSAIVLSPLYVTRKNDTRYYETKWSSGFVLPMVLAGLIIAIKT 65
Query: 68 SSSCSSMSTDRRERDSAILSSDPSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR 118
+SSCSSMS + R S I S DPSWVL+IGSSSWGLAG+L+ML+ LSWQ SV+EF WR
Sbjct: 66 TSSCSSMSA-QGGRASIIPSPDPSWVLRIGSSSWGLAGILVMLLLVLSWQESVQEFFWR 123
BLAST of Csor.00g124110 vs. NCBI nr
Match:
KAF3958642.1 (hypothetical protein CMV_016470 [Castanea mollissima])
HSP 1 Score: 141 bits (356), Expect = 9.29e-41
Identity = 78/119 (65.55%), Postives = 91/119 (76.47%), Query Frame = 0
Query: 8 YTNQISSQRPLAIVLALASAVVLSPL--------RPYESRWSSGFVLPLVLLVLIIAIKT 67
YT+Q SSQR +A+VLAL SA+VLSPL R E++WSSGFVLP+VL LIIAIKT
Sbjct: 6 YTSQYSSQRSVAMVLALVSAIVLSPLYVTRKNDTRYSETKWSSGFVLPMVLAGLIIAIKT 65
Query: 68 SSSCSSMSTDRRERDSAILSSDPSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR 118
+SSCSSMS R S I S DPSWVL+IGSSSWGLAG+L+ML+ LSWQ SV+EF WR
Sbjct: 66 TSSCSSMSAQGGGRASIIPSPDPSWVLRIGSSSWGLAGILVMLLLVLSWQESVQEFFWR 124
BLAST of Csor.00g124110 vs. ExPASy TrEMBL
Match:
A0A0A0LEN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651850 PE=4 SV=1)
HSP 1 Score: 178 bits (451), Expect = 1.12e-55
Identity = 98/119 (82.35%), Postives = 103/119 (86.55%), Query Frame = 0
Query: 1 MDSNYGAYTNQISSQRPLAIVLALASAVVLSPLRPYESRWSSGFVLPLVLLVLIIAIKTS 60
MDSNY AY NQ SSQRPLAI LALASAVVLSPLR YE+ WSSGFV+PLVLL LI+AIKTS
Sbjct: 1 MDSNYSAYANQNSSQRPLAIFLALASAVVLSPLRSYETSWSSGFVVPLVLLGLIVAIKTS 60
Query: 61 SSCSSMSTDRRERDSAILSSD-PSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR 118
SSCSS S RDSAIL SD PSWVLKIGSSSWGLAG+LMMLI GLSWQSSV+EFLWR
Sbjct: 61 SSCSSTS-----RDSAILPSDHPSWVLKIGSSSWGLAGILMMLILGLSWQSSVQEFLWR 114
BLAST of Csor.00g124110 vs. ExPASy TrEMBL
Match:
A0A5A7UY99 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001090 PE=4 SV=1)
HSP 1 Score: 173 bits (438), Expect = 1.07e-53
Identity = 97/119 (81.51%), Postives = 101/119 (84.87%), Query Frame = 0
Query: 1 MDSNYGAYTNQISSQRPLAIVLALASAVVLSPLRPYESRWSSGFVLPLVLLVLIIAIKTS 60
MDSNY AY NQ SS RPLAIVLALASAV LSPLR YE+ WSSGFV+PLVLL LIIAIKTS
Sbjct: 1 MDSNYCAYVNQNSSLRPLAIVLALASAVALSPLRSYETSWSSGFVVPLVLLGLIIAIKTS 60
Query: 61 SSCSSMSTDRRERDSAILSSD-PSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR 118
S CSS S RDSAIL SD PSWVLKIGSSSWGLAG+LMMLI GLSWQSSV+EFLWR
Sbjct: 61 SCCSSTS-----RDSAILPSDHPSWVLKIGSSSWGLAGILMMLILGLSWQSSVQEFLWR 114
BLAST of Csor.00g124110 vs. ExPASy TrEMBL
Match:
A0A2N9IBH6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49527 PE=4 SV=1)
HSP 1 Score: 142 bits (357), Expect = 3.17e-41
Identity = 76/119 (63.87%), Postives = 92/119 (77.31%), Query Frame = 0
Query: 8 YTNQISSQRPLAIVLALASAVVLSPLRP--------YESRWSSGFVLPLVLLVLIIAIKT 67
YT Q SSQR +A+VL+L SA+VLSPL YE++WSSGFVLP+VL+ LIIAI+T
Sbjct: 6 YTGQYSSQRSVAMVLSLVSAIVLSPLYARRKNDTSYYETKWSSGFVLPMVLVGLIIAIRT 65
Query: 68 SSSCSSMSTDRRERDSAILSSDPSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR 118
+SSCSSMS R S I S DPSWVL+IGSSSWGLAG+L+ML+ LSWQ+SV+EF WR
Sbjct: 66 TSSCSSMSAQGGARASIIPSPDPSWVLRIGSSSWGLAGILVMLLLVLSWQASVQEFFWR 124
BLAST of Csor.00g124110 vs. ExPASy TrEMBL
Match:
A0A7N2LMQ6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 141 bits (356), Expect = 4.36e-41
Identity = 79/119 (66.39%), Postives = 93/119 (78.15%), Query Frame = 0
Query: 8 YTNQISSQRPLAIVLALASAVVLSPL--------RPYESRWSSGFVLPLVLLVLIIAIKT 67
YT+Q SSQR +A+VLAL SA+VLSPL R YE++WSSGFVLP+VL LIIAIKT
Sbjct: 6 YTSQYSSQRSVAMVLALVSAIVLSPLYVTRKNDTRYYETKWSSGFVLPMVLAGLIIAIKT 65
Query: 68 SSSCSSMSTDRRERDSAILSSDPSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLWR 118
+SSCSSMS + R S I S DPSWVL+IGSSSWGLAG+L+ML+ LSWQ SV+EF WR
Sbjct: 66 TSSCSSMSA-QGGRASIIPSPDPSWVLRIGSSSWGLAGILVMLLLVLSWQESVQEFFWR 123
BLAST of Csor.00g124110 vs. ExPASy TrEMBL
Match:
A0A6J5WRZ7 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS18716 PE=4 SV=1)
HSP 1 Score: 137 bits (344), Expect = 3.30e-39
Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 0
Query: 7 AYTNQISSQRPLAIVLALASAVVLSPL---------RPYESRWSSGFVLPLVLLVLIIAI 66
AYT+ SSQR A+VLAL SA+VLSPL R YE++WSSGFVLP+VL LIIAI
Sbjct: 7 AYTSHSSSQRSTALVLALVSAIVLSPLYVTTRKTDARYYETKWSSGFVLPMVLAGLIIAI 66
Query: 67 KTSSSCSSMSTDRRERDSAILSSDPSWVLKIGSSSWGLAGLLMMLIFGLSWQSSVKEFLW 118
KT+SS SS S+ + DS + S +PSWVL+IGSSSWGLAG+L++L+ LSWQ SV EFLW
Sbjct: 67 KTTSSSSSSSSSSSQGDSFVPSPEPSWVLRIGSSSWGLAGVLVLLMLVLSWQGSVHEFLW 126
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6581812.1 | 7.96e-75 | 100.00 | hypothetical protein SDJN03_21814, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAE8637311.1 | 2.54e-55 | 82.35 | hypothetical protein CSA_023553, partial [Cucumis sativus] | [more] |
KAA0058525.1 | 2.21e-53 | 81.51 | putative transmembrane protein [Cucumis melo var. makuwa] >TYK07220.1 putative t... | [more] |
XP_030969466.1 | 9.01e-41 | 66.39 | uncharacterized protein LOC115989757 [Quercus lobata] | [more] |
KAF3958642.1 | 9.29e-41 | 65.55 | hypothetical protein CMV_016470 [Castanea mollissima] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LEN3 | 1.12e-55 | 82.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651850 PE=4 SV=1 | [more] |
A0A5A7UY99 | 1.07e-53 | 81.51 | Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A2N9IBH6 | 3.17e-41 | 63.87 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49527 PE=4 SV=1 | [more] |
A0A7N2LMQ6 | 4.36e-41 | 66.39 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
A0A6J5WRZ7 | 3.30e-39 | 61.98 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS18716 PE=... | [more] |
Match Name | E-value | Identity | Description | |