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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGCACGGGAACTTGAGGCACGAGAAGACCCCTTTGTCTGTTTCGGATGGAACGCAATCCTCTTTGAAGGAAAATTGCCAAACGAAGATGACATCGTTGAAACATACAGATGAAGGTTCCTGTTTTACGGCCGATGTTTAAGCACAGGATGAGCATGTGCTGGAAAGTGTGACGAGTGAGCTCCCACACAGTTGTAGCTTCTGAAGAGACAAAGGATTTGCAAGTGTTCTAGCAAACGTCAAGCGTGGAAGTGCCACTTAATGGATATAAGCACCTCATAGGGATGTTAAAGATTTGCAAGAACTTCTTTAGGAGTTGGGGATAACAACGCAACCTGAAACTTACCGTGATACCGAGAAACACAAAAACAGATTCCGAACAAAAGAAACTAAAAATCTTGAGAACAGTGAAGGAAGATAGGGAGTCTCTCTCTGGAAAAACGAACGAACAAAATGCCTGATGAGAAAATTCCAAGGCATAACTGCACAAAGAATATCCTGCGGCTCCGGGGCTTTCAAATGATAACACATTGGAAAATGTGGGTGAACAAGAAAGCAGAGTCAGAAAATATACCGTTCAAATCTCCTTTTCATTTGAGGCATTAGATCTCCGTCATCTTTGATAGTGACAATGTTGATTCAGCACACAGTGAAAAAGTTCCATCTCGCTCGAGGATGACCGAACCTCTAAAAAGTTCTGTGGTGGAAGAGAGACCATCAGTAGGCGGCGGGCAGTTCAAGAGTTCCACAAGTCATTGGATCGTGAAAGCAATGGATCGTGATGCAGAAACCTACGCCGTAGGAGAAACAAAGAACTGGATGGAAGGATAA mRNA sequence ATGCACGGGAACTTGAGGCACGAGAAGACCCCTTTGTCTGTTTCGGATGGAACGCAATCCTCTTTGAAGGAAAATTGCCAAACGAAGATGACATCGTTGAAACATACAGATGAAGCACACAGTGAAAAAGTTCCATCTCGCTCGAGGATGACCGAACCTCTAAAAAGTTCTGTGGTGGAAGAGAGACCATCAGTAGGCGGCGGGCAGTTCAAGAGTTCCACAAGTCATTGGATCGTGAAAGCAATGGATCGTGATGCAGAAACCTACGCCGTAGGAGAAACAAAGAACTGGATGGAAGGATAA Coding sequence (CDS) ATGCACGGGAACTTGAGGCACGAGAAGACCCCTTTGTCTGTTTCGGATGGAACGCAATCCTCTTTGAAGGAAAATTGCCAAACGAAGATGACATCGTTGAAACATACAGATGAAGCACACAGTGAAAAAGTTCCATCTCGCTCGAGGATGACCGAACCTCTAAAAAGTTCTGTGGTGGAAGAGAGACCATCAGTAGGCGGCGGGCAGTTCAAGAGTTCCACAAGTCATTGGATCGTGAAAGCAATGGATCGTGATGCAGAAACCTACGCCGTAGGAGAAACAAAGAACTGGATGGAAGGATAA Protein sequence MHGNLRHEKTPLSVSDGTQSSLKENCQTKMTSLKHTDEAHSEKVPSRSRMTEPLKSSVVEERPSVGGGQFKSSTSHWIVKAMDRDAETYAVGETKNWMEG
Homology
BLAST of Csor.00g108620 vs. NCBI nr
Match: KAG6597074.1 (hypothetical protein SDJN03_10254, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202 bits (515), Expect = 1.23e-65 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 1 MHGNLRHEKTPLSVSDGTQSSLKENCQTKMTSLKHTDEAHSEKVPSRSRMTEPLKSSVVE 60
MHGNLRHEKTPLSVSDGTQSSLKENCQTKMTSLKHTDEAHSEKVPSRSRMTEPLKSSVVE
Sbjct: 1 MHGNLRHEKTPLSVSDGTQSSLKENCQTKMTSLKHTDEAHSEKVPSRSRMTEPLKSSVVE 60
Query: 61 ERPSVGGGQFKSSTSHWIVKAMDRDAETYAVGETKNWMEG 100
ERPSVGGGQFKSSTSHWIVKAMDRDAETYAVGETKNWMEG
Sbjct: 61 ERPSVGGGQFKSSTSHWIVKAMDRDAETYAVGETKNWMEG 100
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| KAG6597074.1 | 1.23e-65 | 100.00 | hypothetical protein SDJN03_10254, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 11..29 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..71 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 30..49 |
Relationships
The following mRNA feature(s) are a part of this gene:
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