Csor.00g083060 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g083060
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionwall-associated receptor kinase-like 14
LocationCsor_Chr05: 1009090 .. 1009392 (+)
RNA-Seq ExpressionCsor.00g083060
SyntenyCsor.00g083060
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCGAGACCCCTACACAATCCAACAAGTTTTTAAAAACGGAAATCAACCTCATCTCCTCTGTCAGCCCCCTAACCTCGTCCGCCTCCTTGGCTGCTCCATGGAATCAGGCGACCAATCCCGTCTACAATTCATGCCCAACGGCACTCTTTCCACATTACAGAACAGAGGGGCACCGCCTCCCCTGGCTTGTCCGCCTCAATATCCGCCGTCGAAACCGCTAATGCATCGCTCATCTCCATTCTGCCATTACCTCCGATCTCCACAGAACATTAAATCCAGTAACAATGACTTGATCTAA

mRNA sequence

ATGTATCGAGACCCCTACACAATCCAACAAGTTTTTAAAAACGGAAATCAACCTCATCTCCTCTGTCAGCCCCCTAACCTCGTCCGCCTCCTTGGCTGCTCCATGGAATCAGGCGACCAATCCCGTCTACAATTCATGCCCAACGGCACTCTTTCCACATTACAGAACAGAGGGGCACCGCCTCCCCTGGCTTGTCCGCCTCAATATCCGCCGTCGAAACCGCTAATGCATCGCTCATCTCCATTCTGCCATTACCTCCGATCTCCACAGAACATTAAATCCAGTAACAATGACTTGATCTAA

Coding sequence (CDS)

ATGTATCGAGACCCCTACACAATCCAACAAGTTTTTAAAAACGGAAATCAACCTCATCTCCTCTGTCAGCCCCCTAACCTCGTCCGCCTCCTTGGCTGCTCCATGGAATCAGGCGACCAATCCCGTCTACAATTCATGCCCAACGGCACTCTTTCCACATTACAGAACAGAGGGGCACCGCCTCCCCTGGCTTGTCCGCCTCAATATCCGCCGTCGAAACCGCTAATGCATCGCTCATCTCCATTCTGCCATTACCTCCGATCTCCACAGAACATTAAATCCAGTAACAATGACTTGATCTAA

Protein sequence

MYRDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRLQFMPNGTLSTLQNRGAPPPLACPPQYPPSKPLMHRSSPFCHYLRSPQNIKSSNNDLI
Homology
[Close]
BLAST of Csor.00g083060 vs. NCBI nr
Match: KAG6598422.1 (hypothetical protein SDJN03_08200, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214 bits (544), Expect = 4.61e-70
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MYRDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRLQFMPNGTLSTLQNRGAP 60
           MYRDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRLQFMPNGTLSTLQNRGAP
Sbjct: 1   MYRDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRLQFMPNGTLSTLQNRGAP 60

Query: 61  PPLACPPQYPPSKPLMHRSSPFCHYLRSPQNIKSSNNDLI 100
           PPLACPPQYPPSKPLMHRSSPFCHYLRSPQNIKSSNNDLI
Sbjct: 61  PPLACPPQYPPSKPLMHRSSPFCHYLRSPQNIKSSNNDLI 100

[Close]
BLAST of Csor.00g083060 vs. NCBI nr
Match: XP_038883980.1 (LOW QUALITY PROTEIN: wall-associated receptor kinase-like 14 [Benincasa hispida])

HSP 1 Score: 57.0 bits (136), Expect = 8.10e-07
Identity = 33/51 (64.71%), Postives = 36/51 (70.59%), Query Frame = 0 

Query: 3   RDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRL-QFMPNGTLS 52
           RDP TIQQV    N    +  P NLVRLLGCSMESGDQ  + +FMPNGTLS
Sbjct: 373 RDPDTIQQVLNEINLISSVSHP-NLVRLLGCSMESGDQILVYEFMPNGTLS 422

[Close]
BLAST of Csor.00g083060 vs. NCBI nr
Match: XP_022996509.1 (wall-associated receptor kinase-like 14 [Cucurbita maxima])

HSP 1 Score: 55.5 bits (132), Expect = 2.82e-06
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 3   RDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRL-QFMPNGTL 51
           RDP TIQQV    N    +  P NLVRLLGCSMESGDQ  + +FMPNGTL
Sbjct: 378 RDPDTIQQVLNEINLISSVSHP-NLVRLLGCSMESGDQILVYEFMPNGTL 426

[Close]
BLAST of Csor.00g083060 vs. NCBI nr
Match: XP_022962460.1 (wall-associated receptor kinase-like 14 [Cucurbita moschata])

HSP 1 Score: 55.5 bits (132), Expect = 2.82e-06
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 3   RDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRL-QFMPNGTL 51
           RDP TIQQV    N    +  P NLVRLLGCSMESGDQ  + +FMPNGTL
Sbjct: 378 RDPDTIQQVLNEINLISSVSHP-NLVRLLGCSMESGDQILVYEFMPNGTL 426

[Close]
BLAST of Csor.00g083060 vs. NCBI nr
Match: XP_023547222.1 (wall-associated receptor kinase-like 14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 55.5 bits (132), Expect = 2.83e-06
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 3   RDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRL-QFMPNGTL 51
           RDP TIQQV    N    +  P NLVRLLGCSMESGDQ  + +FMPNGTL
Sbjct: 402 RDPDTIQQVLNEINLISSVSHP-NLVRLLGCSMESGDQILVYEFMPNGTL 450

[Close]
BLAST of Csor.00g083060 vs. ExPASy TrEMBL
Match: A0A6J1K8X0 (wall-associated receptor kinase-like 14 OS=Cucurbita maxima OX=3661 GN=LOC111491739 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.37e-06
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 3   RDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRL-QFMPNGTL 51
           RDP TIQQV    N    +  P NLVRLLGCSMESGDQ  + +FMPNGTL
Sbjct: 378 RDPDTIQQVLNEINLISSVSHP-NLVRLLGCSMESGDQILVYEFMPNGTL 426

[Close]
BLAST of Csor.00g083060 vs. ExPASy TrEMBL
Match: A0A6J1HF46 (wall-associated receptor kinase-like 14 OS=Cucurbita moschata OX=3662 GN=LOC111462889 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.37e-06
Identity = 32/50 (64.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 3   RDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRL-QFMPNGTL 51
           RDP TIQQV    N    +  P NLVRLLGCSMESGDQ  + +FMPNGTL
Sbjct: 378 RDPDTIQQVLNEINLISSVSHP-NLVRLLGCSMESGDQILVYEFMPNGTL 426

[Close]
BLAST of Csor.00g083060 vs. ExPASy TrEMBL
Match: A0A5A7VIH0 (Wall-associated receptor kinase-like 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006110 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.87e-06
Identity = 32/51 (62.75%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 3   RDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRL-QFMPNGTLS 52
           RDP TI QV    N    +  P NLVRLLGCSMESGDQ  + +FMPNGTLS
Sbjct: 377 RDPDTIHQVLNEINLISSVSHP-NLVRLLGCSMESGDQILVYEFMPNGTLS 426

[Close]
BLAST of Csor.00g083060 vs. ExPASy TrEMBL
Match: A0A1S3BBP6 (wall-associated receptor kinase-like 14 OS=Cucumis melo OX=3656 GN=LOC103487934 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.87e-06
Identity = 32/51 (62.75%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 3   RDPYTIQQVFKNGNQPHLLCQPPNLVRLLGCSMESGDQSRL-QFMPNGTLS 52
           RDP TI QV    N    +  P NLVRLLGCSMESGDQ  + +FMPNGTLS
Sbjct: 377 RDPDTIHQVLNEINLISSVSHP-NLVRLLGCSMESGDQILVYEFMPNGTLS 426

[Close]
BLAST of Csor.00g083060 vs. ExPASy TrEMBL
Match: A0A6J1GGU4 (wall-associated receptor kinase-like 14 OS=Cucurbita moschata OX=3662 GN=LOC111454075 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.56e-06
Identity = 36/62 (58.06%), Postives = 42/62 (67.74%), Query Frame = 0 

Query: 3   RDPYTIQQVFKNGNQPHLLCQP--PNLVRLLGCSMESGDQSRL-QFMPNGTLST--LQNR 59
           +DP TIQQV    N+  L+     PNLVRLLGCSMESGDQ  + +FMPNGTLS    + R
Sbjct: 425 QDPDTIQQVL---NEISLISSVSHPNLVRLLGCSMESGDQILVYEFMPNGTLSQHLQKQR 483

[Close]
BLAST of Csor.00g083060 vs. TAIR 10
Match: AT5G66790.1 (Protein kinase superfamily protein )

HSP 1 Score: 40.8 bits (94), Expect = 7.5e-04
Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 0 

Query: 2   YRDPYTIQQVFKNGNQPHLL--CQPPNLVRLLGCSMESGDQSRL-QFMPNGTL-STLQNR 61
           ++D  +I QV    N+  LL     PNLVRLLGC    G+   + +FMPNGTL   LQ+ 
Sbjct: 346 HKDTTSIDQVV---NEIKLLSSVSHPNLVRLLGCCFADGEPFLVYEFMPNGTLYQHLQHE 405

Query: 62  GAPPPLA 65
              PPL+
Sbjct: 406 RGQPPLS 409

The following BLAST results are available for this feature:
BLAST of Csor.00g083060 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g083060 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6598422.14.61e-70100.00hypothetical protein SDJN03_08200, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038883980.18.10e-0764.71LOW QUALITY PROTEIN: wall-associated receptor kinase-like 14 [Benincasa hispida][more]
XP_022996509.12.82e-0664.00wall-associated receptor kinase-like 14 [Cucurbita maxima][more]
XP_022962460.12.82e-0664.00wall-associated receptor kinase-like 14 [Cucurbita moschata][more]
XP_023547222.12.83e-0664.00wall-associated receptor kinase-like 14 [Cucurbita pepo subsp. pepo][more]
BLAST of Csor.00g083060 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K8X01.37e-0664.00wall-associated receptor kinase-like 14 OS=Cucurbita maxima OX=3661 GN=LOC111491... [more]
A0A6J1HF461.37e-0664.00wall-associated receptor kinase-like 14 OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A5A7VIH01.87e-0662.75Wall-associated receptor kinase-like 14 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S3BBP61.87e-0662.75wall-associated receptor kinase-like 14 OS=Cucumis melo OX=3656 GN=LOC103487934 ... [more]
A0A6J1GGU42.56e-0658.06wall-associated receptor kinase-like 14 OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
BLAST of Csor.00g083060 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G66790.17.5e-0443.28Protein kinase superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g083060.m01Csor.00g083060.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0016310 phosphorylation
cellular_component GO:0005886 plasma membrane
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004672 protein kinase activity