Csor.00g077030 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g077030
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionObg-like ATPase 1
LocationCsor_Chr01: 10685800 .. 10689701 (+)
RNA-Seq ExpressionCsor.00g077030
SyntenyCsor.00g077030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACGGTGGTTGGCCGTCGTTTCTCTGATACATATAAGTTCAGTACGAGCCTCAGAGCCGGCATCGTTGGCCTCATCAATGTTGGAAAATCAACGCTCTTCAATGTCGTCGTAAGCTAATATCGGTTGCTCTCTCTCTTTATTTCATACTAAATTTACTGTAATTTGGATTTCGAGCTATGGAACTGATGGTTACTTTCGGAAAACTCCGTAGCTACTGAAGAATTCGTTGTTGAATTGTCGTTATAGCTAGTGGATTGTGGAATTGTGCACCAGGATTTGTGAACTATTGGATTATAATGTAGGTAGTTTATAAACGCTACGGACTCACAGCTCTCTTCGAATTTTTCATGGTCTGATTATCGTATTTTTCATGTTAGGTTTTCTACATATCTTGTGCATCTTAAGGCTACGCCTCGAGATTTTGACACGATAGCTCCACATATTCACTCCGAGCGATGAATGTGTTTCAATAATTTGTTTAAAGTGATTTTTTCGGATCATCATCGCTTTTACTAATTTTGATACAAGCTACATCATAGTATATTTAATATGATGATAATCATGCTGTTTCTGGCTAACAATGCAGTGTCATGTGTCCGATTGTGAAAGCTCACTTAACTTCTAACTTCTTTCCACAGATTTAATTTTGTGAATTGGACGGCTTCCTCTTTTAGTTCATACTTCCACTTGGAAATCTACATCAATTTCATATGACGCGTATTGTCTATGATGGAAACCTTTGCAGGTTGAAAATGGCAAGGCTCAAGCAGCTAAATTTCCTTTCTGTACAATAGAGCCCAACGTAGGAGTAGTTGCAGTTCCAGATCCTCGTCTGCATCAACTTTCTGATCTCAGCAAGTCTATACGAGCGGTCCCAGCATCCATAGAGTTTGTAGATACTGCTGGGTTAATGAATGGTGCCAGTCAAGGAGAAGTATGGTTCATTCACACCTCTGTTGAGGATTGTTGGGAGTGAGTCCCACCATGGCTAATTTAGAGAATGATCATGAGTTTATAGGTAAAGGAATACATCTCCATTGGCATGAGGCCTTTTGGGGAAGCCTAAAGCAAAACCATGAGAGCTTATGCTCAAAGTGGACAATATCATATCATTGTGGAGAGTCGTGATTCTTAACACACCTCAGCGTTCTTTGACTAAGATTCCAAATGATTTTTGAATAAAGATGAAATTCATTGTACAGAAATGACAAGAAAACAAACACAATTTTCAAAAACAAAAAATTAAAAATTAAATGGTTGTGGAAATACACATTTTGAAAATTCATTTGTATGTATGTTTTCATTGATGTTATTTTCTAGAATTCTGTAATAGACTTCCCCTTTATTTTGACCACTGCAGGGATTGGGAATATAACTTCTTATCCCATGTTCGTGAGGTGGAGGTCCATACTTCAGGTGATTTTCTATTTTATCATATTTCTTTTGTCATAATACTTAGAAACCTACTTACATAATTGTATTTCTAAAGAGTAATACCGGTTTAACAGATGAATTGGCTAGTATATTTCTCTGCAATATCAACTGCCCGGTGATTCAACAAGAGAAAGAATGGACTTTAATTTGTTGAATTCTTTGTTTTTTTGTCTTACAGAATTGTGTAAGTTTTTGTTCCTATTTATCTACTTAACTTTTCTGTTATATATTTTTGTCCTATAATACGCATGCATGCCAAATAGCCAAAACAATGCCCTGGAAGCTCTAAGAATAACGTGGGCACTTCTTGCTTTTTTCATTACTTAATTTTGTGCTGTTAAATATTTTAATATTATTGTTCCAGGCTGTGCGCTGTTTTGAGGATAACGACATTGTTCACGTGAATGGGAAAATTGATCCAAAAACTGGTATTGATTTGATTAACTTAGAGCTTTATTTTTCAGATCTGGACCAGGTAACATCACTGAAACCTTTTCTATATTCATACGCATGTTTTGCACCTTTTAGTATGCAGGGTTACAATCCTTTGTTATTATCTTGCTACTTTTTATTTAATTGTACATTTGCCTTTTGTACTGCCGTTAACTGAATCCCTATATATTAGAGATATTAGGTAACAATAAATCTAAATAAATTCTTATCTAAAGCGAGCACTGGCTTTGTTTGCCTCTCTCGTGTTCACCCTTTTGGAGTACTTCCATGAGCATTACTGGCCTCTCTCATACTCACTCCACTTGGAGCACTTCTATTGGTATTGTTTGCCTCTCTAGTGCTCACTTCTTAAGGAAAATTGATTGATTAATGTTTGTGAAGAACTCCATCGCTTGCAATGGTGACTTCTTGAAGCAATTTTTTGAACTTCTAATCGTTCCTCACAGCTAGAAGAACATGCCTAGGGTTTATCCTAGTTTTCTAGCCAATTCCAAAATCTGAGTGCCAAGGTATTTGAGGATGACAGCTAGGTAGATCGAAGCATATACGACAATCCCCTTTTCGTAGTGACCTTTCTTAAGGTACTGTATGATTCTTCCATCCGGGCATTAGAGTCTAGCCTTACAAAGTTGGAGATTTTAGTTTAGTCGCCTCCTTTATTGAATACTTCAAATATGAATCTCAAAATTTGATGTTTTGTGATGATGATGGAAAGAATGACTTGAGATTTTTTTTGACATGATGGAATAAACAAGAGGATAGTATCTTGGTCATGATCGGTTGCTAGGAAGGCTCCAAATAAATTTAGTCAAATTGGAAGGCTATGCTAATTAATTACACCTCTGAAAATAGAAGGAAATAAGGAAATGAATCCTATTTCCTAGTTGAAGTATGGTATGTTAGATTCTGGGCCTTTCTTGCTTGTTTGGTCTTCCTTAAAAATTTTGGATTCTCAAGAATTGATGGAGCAAGTGAGACTACAATAATGATTCTTAAAGAAGAGAAGATGTCAATGGTTTCAAACCCACTGGGCTCTTGCTTCTATTACGCAATGGGCCAAATTATTGCTGTTGTTGAATGGGTTTTATCTGATGTTGCAAATGTTATGACGTTGCAATGGAAGTCGCAAGTGGGCCTGGCGCAAGAGTCCCCCCAATGGACTTTTGATGCTGCAGAGGAACTTAATACTCTGACGCAAATAGAAATCGACTTATATATATCATATTGCTCTCAAAGTATGATTAAATTTGTTGGTAAAAATCTGATTTAAAATTAAAAACGTTTCAGTCAAAGAAGGACGTAGCCCACTGGATCTGGCTGTGTTGACTTTGTTTTTCCAACAATTCTTACATCAGAGAGGAATAGGATTAAAGCTCATGAAATGCAATGTTACAAACAGAGTGATCGATAATTCTGTCCTGCCTATGAATGGCCAAATTTTTAAAGATGGATATACTTACATGAAGTAAAGATTTATGGATGAAATATACGAAAGTTTTCATTGATGTTAATGAGAATCTGACACCAAAGAGAAGAAAACGTCATTAGCTGTTCTCTCCTTTTGTTCTTTGTTTCAACGAAGTTCTTGATGTTTCTTACAAAAAGAATAAATAATAATCCTTGTCCATAGATTATCATCATGTCTTTTTTTTTTTTTTTTTGTTAAGTATTGGGTTTTGTTCATTGGGACGTTTTCTTGTGATTAGACTTGGTTGTTCTTCTTCTCGTTCGTTGCCCTTTGGTGGCTTGAGGCCCTACACTTTTTTGTGTCTGTTCCTATACTCTGTTTTCTTAACAAAGGTGGTTTGGAGAACATATTCTCTTGGTTAAAAGAATGTCATTCAGAGATTTGGGGATCAACCTGCCTCGTTCTTTTGTCTTTTAGAACGAAACTTGGCCTACCAAGGCCAGTGCAACAAGAAAAGTGCTCTAATAGAAGAATTTCTATTCGTCCATAAGAACTTAAAAAGTTTAGCGAAGAAACGGACTGGTATAGTGCTGTATGATTGA

mRNA sequence

ATGTTACGGTGGTTGGCCGTCGTTTCTCTGATACATATAAGTTCAGTACGAGCCTCAGAGCCGGCATCGTTGGCCTCATCAATGTTGGAAAATCAACGCTCTTCAATGTCGTCGTTGAAAATGGCAAGGCTCAAGCAGCTAAATTTCCTTTCTCAAGTCTATACGAGCGGTCCCAGCATCCATAGAGTTTGTAGATACTGCTGGGTTAATGAATGGTGCCAGTCAAGGAGAAGGATTGGGAATATAACTTCTTATCCCATGTTCGTGAGGTGGAGGTCCATACTTCAGGCTGTGCGCTGTTTTGAGGATAACGACATTGTTCACGTGAATGGGAAAATTGATCCAAAAACTGGTATTGATTTGATTAACTTAGAGCTTTATTTTTCAGATCTGGACCAGAGATTTGGGGATCAACCTGCCTCGTTCTTTTGTCTTTTAGAACGAAACTTGGCCTACCAAGGCCAGTGCAACAAGAAAAGTGCTCTAATAGAAGAATTTCTATTCGTCCATAAGAACTTAAAAAGTTTAGCGAAGAAACGGACTGGTATAGTGCTGTATGATTGA

Coding sequence (CDS)

ATGTTACGGTGGTTGGCCGTCGTTTCTCTGATACATATAAGTTCAGTACGAGCCTCAGAGCCGGCATCGTTGGCCTCATCAATGTTGGAAAATCAACGCTCTTCAATGTCGTCGTTGAAAATGGCAAGGCTCAAGCAGCTAAATTTCCTTTCTCAAGTCTATACGAGCGGTCCCAGCATCCATAGAGTTTGTAGATACTGCTGGGTTAATGAATGGTGCCAGTCAAGGAGAAGGATTGGGAATATAACTTCTTATCCCATGTTCGTGAGGTGGAGGTCCATACTTCAGGCTGTGCGCTGTTTTGAGGATAACGACATTGTTCACGTGAATGGGAAAATTGATCCAAAAACTGGTATTGATTTGATTAACTTAGAGCTTTATTTTTCAGATCTGGACCAGAGATTTGGGGATCAACCTGCCTCGTTCTTTTGTCTTTTAGAACGAAACTTGGCCTACCAAGGCCAGTGCAACAAGAAAAGTGCTCTAATAGAAGAATTTCTATTCGTCCATAAGAACTTAAAAAGTTTAGCGAAGAAACGGACTGGTATAGTGCTGTATGATTGA

Protein sequence

MLRWLAVVSLIHISSVRASEPASLASSMLENQRSSMSSLKMARLKQLNFLSQVYTSGPSIHRVCRYCWVNEWCQSRRRIGNITSYPMFVRWRSILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQRFGDQPASFFCLLERNLAYQGQCNKKSALIEEFLFVHKNLKSLAKKRTGIVLYD
Homology
[Close]
BLAST of Csor.00g077030 vs. ExPASy Swiss-Prot
Match: P44681 (Ribosome-binding ATPase YchF OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=ychF PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 2.9e-06
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLD 133
           +I   VRCFE++DIVHV GKIDP   ID IN EL  +DLD
Sbjct: 99  AIGHVVRCFENDDIVHVAGKIDPLDDIDTINTELALADLD 138

[Close]
BLAST of Csor.00g077030 vs. ExPASy Swiss-Prot
Match: Q89AR6 (Ribosome-binding ATPase YchF OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=ychF PE=3 SV=3)

HSP 1 Score: 52.4 bits (124), Expect = 6.5e-06
Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 0 

Query: 94  ILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQRFGDQPASFFCLLERN-LAY 153
           I+  VRCFE+  + H+ G +DP   + +INLEL  SD+     +   +  C LE N L++
Sbjct: 100 IMHIVRCFENRYVTHIYGSVDPVRDVQIINLELILSDI-----EVCKNRMCKLEINKLSH 159

Query: 154 QGQCNKKSALIEEFLFVHKNLKSL 177
             Q NK+  ++++ ++  +  KSL
Sbjct: 160 NKQVNKELLILKKCVYHLEKSKSL 178

[Close]
BLAST of Csor.00g077030 vs. ExPASy Swiss-Prot
Match: Q7VMI2 (Ribosome-binding ATPase YchF OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) OX=233412 GN=ychF PE=3 SV=3)

HSP 1 Score: 52.4 bits (124), Expect = 6.5e-06
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLD 133
           +I   VRCFE++DIVHV GKIDP   I+ IN EL  +DLD
Sbjct: 99  AIGHVVRCFENDDIVHVAGKIDPADDIETINTELALADLD 138

[Close]
BLAST of Csor.00g077030 vs. ExPASy Swiss-Prot
Match: Q9CP90 (Ribosome-binding ATPase YchF OS=Pasteurella multocida (strain Pm70) OX=272843 GN=ychF PE=3 SV=3)

HSP 1 Score: 50.4 bits (119), Expect = 2.5e-05
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLD 133
           +I   VRCFE++DIVHV G+I+P   ID IN EL  +DLD
Sbjct: 99  AIGHVVRCFENDDIVHVAGQINPAEDIDTINTELALADLD 138

[Close]
BLAST of Csor.00g077030 vs. ExPASy Swiss-Prot
Match: P0ABU3 (Ribosome-binding ATPase YchF OS=Escherichia coli O157:H7 OX=83334 GN=ychF PE=3 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 4.2e-05
Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLD 133
           +I   VRCFE+++I+HV+GK++P   I++IN EL  +DLD
Sbjct: 99  AIGHVVRCFENDNIIHVSGKVNPADDIEVINTELALADLD 138

[Close]
BLAST of Csor.00g077030 vs. NCBI nr
Match: KAG6607971.1 (hypothetical protein SDJN03_01313, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377 bits (967), Expect = 9.59e-132
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 

Query: 1   MLRWLAVVSLIHISSVRASEPASLASSMLENQRSSMSSLKMARLKQLNFLSQVYTSGPSI 60
           MLRWLAVVSLIHISSVRASEPASLASSMLENQRSSMSSLKMARLKQLNFLSQVYTSGPSI
Sbjct: 1   MLRWLAVVSLIHISSVRASEPASLASSMLENQRSSMSSLKMARLKQLNFLSQVYTSGPSI 60

Query: 61  HRVCRYCWVNEWCQSRRRIGNITSYPMFVRWRSILQAVRCFEDNDIVHVNGKIDPKTGID 120
           HRVCRYCWVNEWCQSRRRIGNITSYPMFVRWRSILQAVRCFEDNDIVHVNGKIDPKTGID
Sbjct: 61  HRVCRYCWVNEWCQSRRRIGNITSYPMFVRWRSILQAVRCFEDNDIVHVNGKIDPKTGID 120

Query: 121 LINLELYFSDLDQRFGDQPASFFCLLERNLAYQGQCNKKSALIEEFLFVHKNLKSLAKKR 180
           LINLELYFSDLDQRFGDQPASFFCLLERNLAYQGQCNKKSALIEEFLFVHKNLKSLAKKR
Sbjct: 121 LINLELYFSDLDQRFGDQPASFFCLLERNLAYQGQCNKKSALIEEFLFVHKNLKSLAKKR 180

Query: 181 TGIVLYD 187
           TGIVLYD
Sbjct: 181 TGIVLYD 187

[Close]
BLAST of Csor.00g077030 vs. NCBI nr
Match: KAG7037484.1 (Ribosome-binding ATPase YchF, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 81.6 bits (200), Expect = 3.75e-15
Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 97  AVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQR 134
           AVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQ+
Sbjct: 180 AVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQK 217

[Close]
BLAST of Csor.00g077030 vs. NCBI nr
Match: KAA0052340.1 (ribosome-binding ATPase YchF [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 2.13e-14
Identity = 38/45 (84.44%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQRFGD 137
           SILQ VRCFEDNDIVHVNGKIDPKT ID+INLEL  SDLDQ F D
Sbjct: 151 SILQVVRCFEDNDIVHVNGKIDPKTDIDVINLELVLSDLDQPFYD 195

[Close]
BLAST of Csor.00g077030 vs. NCBI nr
Match: MBA0809245.1 (hypothetical protein [Gossypium harknessii])

HSP 1 Score: 77.0 bits (188), Expect = 9.90e-14
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQ 133
           SILQ VRCFEDNDIVHVNGK+DPK+ ID+INLEL FSDLDQ
Sbjct: 146 SILQVVRCFEDNDIVHVNGKVDPKSDIDVINLELVFSDLDQ 186

[Close]
BLAST of Csor.00g077030 vs. NCBI nr
Match: KAG4204549.1 (hypothetical protein ERO13_A04G050966v2 [Gossypium hirsutum])

HSP 1 Score: 77.0 bits (188), Expect = 1.11e-13
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQ 133
           SILQ VRCFEDNDIVHVNGK+DPK+ ID+INLEL FSDLDQ
Sbjct: 146 SILQVVRCFEDNDIVHVNGKVDPKSDIDVINLELVFSDLDQ 186

[Close]
BLAST of Csor.00g077030 vs. ExPASy TrEMBL
Match: A0A5A7UAY0 (Ribosome-binding ATPase YchF OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001780 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.03e-14
Identity = 38/45 (84.44%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQRFGD 137
           SILQ VRCFEDNDIVHVNGKIDPKT ID+INLEL  SDLDQ F D
Sbjct: 151 SILQVVRCFEDNDIVHVNGKIDPKTDIDVINLELVLSDLDQPFYD 195

[Close]
BLAST of Csor.00g077030 vs. ExPASy TrEMBL
Match: A0A7J9HK09 (OBG-type G domain-containing protein OS=Gossypium harknessii OX=34285 GN=Gohar_024915 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.79e-14
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQ 133
           SILQ VRCFEDNDIVHVNGK+DPK+ ID+INLEL FSDLDQ
Sbjct: 146 SILQVVRCFEDNDIVHVNGKVDPKSDIDVINLELVFSDLDQ 186

[Close]
BLAST of Csor.00g077030 vs. ExPASy TrEMBL
Match: A0A6J1IHV4 (Obg-like ATPase 1 OS=Cucurbita maxima OX=3661 GN=LOC111477062 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.04e-13
Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQ 133
           SILQ VRCFEDNDIVHVNGKIDPKT ID+INLEL FSDLDQ
Sbjct: 151 SILQVVRCFEDNDIVHVNGKIDPKTDIDVINLELVFSDLDQ 191

[Close]
BLAST of Csor.00g077030 vs. ExPASy TrEMBL
Match: A0A0A0KZ18 (Obg-like ATPase 1 OS=Cucumis sativus OX=3659 GN=Csa_4G606030 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.04e-13
Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQ 133
           SILQ VRCFEDNDIVHVNGKIDPKT ID+INLEL FSDLDQ
Sbjct: 151 SILQVVRCFEDNDIVHVNGKIDPKTDIDVINLELVFSDLDQ 191

[Close]
BLAST of Csor.00g077030 vs. ExPASy TrEMBL
Match: A0A6J1FB19 (Obg-like ATPase 1 OS=Cucurbita moschata OX=3662 GN=LOC111443686 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.04e-13
Identity = 37/41 (90.24%), Postives = 38/41 (92.68%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQ 133
           SILQ VRCFEDNDIVHVNGKIDPKT ID+INLEL FSDLDQ
Sbjct: 151 SILQVVRCFEDNDIVHVNGKIDPKTDIDVINLELVFSDLDQ 191

[Close]
BLAST of Csor.00g077030 vs. TAIR 10
Match: AT1G56050.1 (GTP-binding protein-related )

HSP 1 Score: 75.9 bits (185), Expect = 3.9e-14
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0 

Query: 93  SILQAVRCFEDNDIVHVNGKIDPKTGIDLINLELYFSDLDQ 134
           SILQ VRCFEDNDI+HVNGK+DPK+ ID+INLEL F DLDQ
Sbjct: 151 SILQVVRCFEDNDIIHVNGKVDPKSDIDVINLELIFCDLDQ 191

The following BLAST results are available for this feature:
BLAST of Csor.00g077030 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P446812.9e-0662.50Ribosome-binding ATPase YchF OS=Haemophilus influenzae (strain ATCC 51907 / DSM ... [more]
Q89AR66.5e-0633.33Ribosome-binding ATPase YchF OS=Buchnera aphidicola subsp. Baizongia pistaciae (... [more]
Q7VMI26.5e-0660.00Ribosome-binding ATPase YchF OS=Haemophilus ducreyi (strain 35000HP / ATCC 70072... [more]
Q9CP902.5e-0557.50Ribosome-binding ATPase YchF OS=Pasteurella multocida (strain Pm70) OX=272843 GN... [more]
P0ABU34.2e-0550.00Ribosome-binding ATPase YchF OS=Escherichia coli O157:H7 OX=83334 GN=ychF PE=3 S... [more]
BLAST of Csor.00g077030 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6607971.19.59e-132100.00hypothetical protein SDJN03_01313, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7037484.13.75e-1597.37Ribosome-binding ATPase YchF, partial [Cucurbita argyrosperma subsp. argyrosperm... [more]
KAA0052340.12.13e-1484.44ribosome-binding ATPase YchF [Cucumis melo var. makuwa][more]
MBA0809245.19.90e-1485.37hypothetical protein [Gossypium harknessii][more]
KAG4204549.11.11e-1385.37hypothetical protein ERO13_A04G050966v2 [Gossypium hirsutum][more]
BLAST of Csor.00g077030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UAY01.03e-1484.44Ribosome-binding ATPase YchF OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A7J9HK094.79e-1485.37OBG-type G domain-containing protein OS=Gossypium harknessii OX=34285 GN=Gohar_0... [more]
A0A6J1IHV41.04e-1390.24Obg-like ATPase 1 OS=Cucurbita maxima OX=3661 GN=LOC111477062 PE=3 SV=1[more]
A0A0A0KZ181.04e-1390.24Obg-like ATPase 1 OS=Cucumis sativus OX=3659 GN=Csa_4G606030 PE=3 SV=1[more]
A0A6J1FB191.04e-1390.24Obg-like ATPase 1 OS=Cucurbita moschata OX=3662 GN=LOC111443686 PE=3 SV=1[more]
BLAST of Csor.00g077030 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G56050.13.9e-1480.49GTP-binding protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023192TGS-like domain superfamilyGENE3D1.10.150.300coord: 110..132
e-value: 1.2E-8
score: 36.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 93..109
e-value: 1.2E-8
score: 36.4
NoneNo IPR availablePANTHERPTHR23305:SF18OBG-LIKE ATPASE 1coord: 93..146
NoneNo IPR availablePANTHERPTHR23305OBG GTPASE FAMILYcoord: 93..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g077030.m01Csor.00g077030.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0043023 ribosomal large subunit binding
molecular_function GO:0043022 ribosome binding