Csor.00g056520 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g056520
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	H4/H2A histone acetyltransferase complex
Location	Csor_Chr04: 8646849 .. 8648577 (-)
RNA-Seq Expression	Csor.00g056520
Synteny	Csor.00g056520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGCGGCGGAAAAGGGAGAGAGGAAGAACAAGACGGCATTTCTGTACATTCTCCATGTAAAGCTCCACCGTCCTCCGCTTCCTCTCTTCCCAAGGTCTCTCATTCTCTCTCTTCTTCTTCTTCTTCAGGCTTGTTTTATAACTGCAGGAATTTGAATTTTTCTATTGTTTTTGGTGTGTTGTGGCTAGGAGCAACCACAGATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAGATTTATCCGCTAGTCAAGCTACAAGGTAAGTTTAATTCAACAATATTCTTTCTAGTTTTTAATTGTAATACCAAGGCGTGAGTAGTTTATCAGTTTTCGAGTCTGTTCATCCTCAGTATCATCGATGCCGAATCCTGCATTTTTAATCAATAAGTGAGAATTGAACATGTTTCATATTTCTGCATTCAGTGATAATGATTGACTTCTTACTGTTACTATCATTTTGCGTGGTCTGATGAAAGTGGTATGGAGGATTATAAATCAGGATTGAGGCAGCCATTCTTACGGTCGAGAAATGACTGTAAGAGAGTACTAAGCGAATTAAGTTTATCTTCCCACAATGCCATTCTGTTTTTCACTGGAGGCGTTTACCGATTACAAATACGGAGGAAATGTTGTGAATTAATTATATTACGATCAATAAAATCACATTATTTTATAACCACCACTCTCGAGAACATAAGATGTGAATTCTCGTCATTATAGGGAACTCATTCTTTGTCTTGCAAGGAAAGGAAATAAACTTTAATGTATTTGCTCATGATTTCAACTGATTGCATACTGCTTATTGGTCTTTTATTTCCCTTCTACAAACGAGCTTACTGTCAAAGAATTATCATCATTTTTCATATAGGCATACATCGCCACTTTGTCCTCTTCGGGTTGATGGAATTTCTGCGAAGAAGGTTTTCTCTGTCCCATGTACCACCTTCCTTGCGTTTTTTATTGAGCTTTGACCCTAAAATCTAGTGGCTTCTACAATTTCTTTTGCGTACTCAATTGGTTTACCTTCTTCTTGTCACAGCTTTGATCGTCCGTTCTCTTCTGATGAGGTTTTACAGTTGTTGGATCGGTTCTATAACCTGGAAATGCTGGTAAAAAGAATCACTACTGCTTTTCTTTTGTCCTTATTTTATTTTTGTCTGTGGGCTTCATTTTGCTTCAAAAGGAAGATAATCTAAATAGCGTAAATATTTTTTTTTCATAGGAAGTTAATAGCATAAATATAGATAATCTTTAATGTACTCGAACATGTCACAAATTCACCTTTCTTGTATTCATTATTTTGAAAGAAAAAGTTACTAATTCCTAATAATCATATTTATTCTGGTGGGCCATGAACTTGTGACAAGTTTGGGTACTTAATCAGCGGAGCTCTGAGTTTACACCTGACCTGATAGATCATATTCACGTTCTTTATAAAGAACATACCGTTTCTAGCTTGATTAGCAAATTTGTCTCGGTGTATTAAATTTTACGTTTTTGAAGAGTTAGAACCAAATAACGTGGGGGCGTTCCTTTACAGTCCAAAAGTCGTTTTTTTTTCTTTTTGTCCTCTTATTAACTGATGGGATATATGTGCTAAGATTGCTTTCCTCTCCGCATCACACTATATTTCAGAAGCCAGACGATGAGGAAATGGAAATTCTGAATCAAGAGGAAGATTTTTGCTTACCTCAAACCTTCTTCGTCAAAGAAGAGTCTTAA

mRNA sequence

ATGGAAAGCGGCGGAAAAGGGAGAGAGGAAGAACAAGACGGCATTTCTGTACATTCTCCATGTAAAGCTCCACCGTCCTCCGCTTCCTCTCTTCCCAAGGAGCAACCACAGATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAGATTTATCCGCTAGTCAAGCTACAAGGCATACATCGCCACTTTGTCCTCTTCGGGTTGATGGAATTTCTGCGAAGAAGCTTTGATCGTCCGTTCTCTTCTGATGAGGTTTTACAGTTGTTGGATCGGTTCTATAACCTGGAAATGCTGAAGCCAGACGATGAGGAAATGGAAATTCTGAATCAAGAGGAAGATTTTTGCTTACCTCAAACCTTCTTCGTCAAAGAAGAGTCTTAA

Coding sequence (CDS)

ATGGAAAGCGGCGGAAAAGGGAGAGAGGAAGAACAAGACGGCATTTCTGTACATTCTCCATGTAAAGCTCCACCGTCCTCCGCTTCCTCTCTTCCCAAGGAGCAACCACAGATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAGATTTATCCGCTAGTCAAGCTACAAGGCATACATCGCCACTTTGTCCTCTTCGGGTTGATGGAATTTCTGCGAAGAAGCTTTGATCGTCCGTTCTCTTCTGATGAGGTTTTACAGTTGTTGGATCGGTTCTATAACCTGGAAATGCTGAAGCCAGACGATGAGGAAATGGAAATTCTGAATCAAGAGGAAGATTTTTGCTTACCTCAAACCTTCTTCGTCAAAGAAGAGTCTTAA

Protein sequence

MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIHRHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTFFVKEES

Homology

[Close]

BLAST of Csor.00g056520 vs. NCBI nr
Match: XP_022956482.1 (uncharacterized protein LOC111458204 [Cucurbita moschata] >XP_022984147.1 uncharacterized protein LOC111482526 [Cucurbita maxima] >XP_023525987.1 uncharacterized protein LOC111789518 [Cucurbita pepo subsp. pepo] >KAG6601472.1 hypothetical protein SDJN03_06705, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032252.1 hypothetical protein SDJN02_06296 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246 bits (628), Expect = 4.83e-82
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60
           MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH
Sbjct: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60

Query: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120
           RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF
Sbjct: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120

Query: 121 FVKEES 126
           FVKEES
Sbjct: 121 FVKEES 126

[Close]

BLAST of Csor.00g056520 vs. NCBI nr
Match: XP_008446430.1 (PREDICTED: uncharacterized protein LOC103489178 [Cucumis melo])

HSP 1 Score: 241 bits (615), Expect = 4.64e-80
Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60
           MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH
Sbjct: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60

Query: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120
           RHFVLFGLMEFLRRSFDR FSSDEVLQLLDRFYNLEMLKPDDEEMEILN EEDFCLPQTF
Sbjct: 61  RHFVLFGLMEFLRRSFDRQFSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTF 120

Query: 121 FVKEES 126
           FVKEES
Sbjct: 121 FVKEES 126

[Close]

BLAST of Csor.00g056520 vs. NCBI nr
Match: XP_038893367.1 (uncharacterized protein LOC120082183 [Benincasa hispida])

HSP 1 Score: 240 bits (612), Expect = 1.33e-79
Identity = 123/126 (97.62%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60
           MESGGKGREEEQDG+SVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH
Sbjct: 1   MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60

Query: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120
           RHFVLFGLMEFLRRSFDR FSSDEVLQLLDRFYNLEMLKPDDEEMEILN EEDFCLPQTF
Sbjct: 61  RHFVLFGLMEFLRRSFDRQFSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTF 120

Query: 121 FVKEES 126
           FVKEES
Sbjct: 121 FVKEES 126

[Close]

BLAST of Csor.00g056520 vs. NCBI nr
Match: XP_004135149.1 (uncharacterized protein LOC101212766 isoform X2 [Cucumis sativus] >KGN51973.1 hypothetical protein Csa_008415 [Cucumis sativus])

HSP 1 Score: 239 bits (610), Expect = 2.69e-79
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60
           MESGGKGREEEQDGISVHSPCKAPPSSASSLPKE PQIELELKLLQALEIYPLVKLQGIH
Sbjct: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEHPQIELELKLLQALEIYPLVKLQGIH 60

Query: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120
           RHFVLFGLMEFLRRSFDR FSSDEVLQLLDRFYNLEMLKPDDEEMEILN EEDFCLPQTF
Sbjct: 61  RHFVLFGLMEFLRRSFDRQFSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTF 120

Query: 121 FVKEES 126
           FVKEES
Sbjct: 121 FVKEES 126

[Close]

BLAST of Csor.00g056520 vs. NCBI nr
Match: XP_022945110.1 (uncharacterized protein LOC111449449 [Cucurbita moschata] >XP_023541772.1 uncharacterized protein LOC111801826 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236 bits (601), Expect = 6.34e-78
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60
           MESGGKGR+EEQDG+SVHSPCKAPPSSASSLPKEQ QIELELKLLQALEIYPLVKLQGIH
Sbjct: 1   MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPLVKLQGIH 60

Query: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120
           RHFVLFGLMEFLRRSFDR FSSDEVLQLLDRFYNLEMLKPDDEEMEILN EEDFCLPQTF
Sbjct: 61  RHFVLFGLMEFLRRSFDRQFSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTF 120

Query: 121 FVKEES 126
           FVKEES
Sbjct: 121 FVKEES 126

[Close]

BLAST of Csor.00g056520 vs. ExPASy TrEMBL
Match: A0A6J1J1E0 (uncharacterized protein LOC111482526 OS=Cucurbita maxima OX=3661 GN=LOC111482526 PE=3 SV=1)

HSP 1 Score: 246 bits (628), Expect = 2.34e-82
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60
           MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH
Sbjct: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60

Query: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120
           RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF
Sbjct: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120

Query: 121 FVKEES 126
           FVKEES
Sbjct: 121 FVKEES 126

[Close]

BLAST of Csor.00g056520 vs. ExPASy TrEMBL
Match: A0A6J1GWG3 (uncharacterized protein LOC111458204 OS=Cucurbita moschata OX=3662 GN=LOC111458204 PE=3 SV=1)

HSP 1 Score: 246 bits (628), Expect = 2.34e-82
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60
           MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH
Sbjct: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60

Query: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120
           RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF
Sbjct: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120

Query: 121 FVKEES 126
           FVKEES
Sbjct: 121 FVKEES 126

[Close]

BLAST of Csor.00g056520 vs. ExPASy TrEMBL
Match: A0A1S3BFV8 (uncharacterized protein LOC103489178 OS=Cucumis melo OX=3656 GN=LOC103489178 PE=3 SV=1)

HSP 1 Score: 241 bits (615), Expect = 2.25e-80
Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60
           MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH
Sbjct: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60

Query: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120
           RHFVLFGLMEFLRRSFDR FSSDEVLQLLDRFYNLEMLKPDDEEMEILN EEDFCLPQTF
Sbjct: 61  RHFVLFGLMEFLRRSFDRQFSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTF 120

Query: 121 FVKEES 126
           FVKEES
Sbjct: 121 FVKEES 126

[Close]

BLAST of Csor.00g056520 vs. ExPASy TrEMBL
Match: A0A0A0KQU2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606640 PE=3 SV=1)

HSP 1 Score: 239 bits (610), Expect = 1.30e-79
Identity = 123/126 (97.62%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60
           MESGGKGREEEQDGISVHSPCKAPPSSASSLPKE PQIELELKLLQALEIYPLVKLQGIH
Sbjct: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEHPQIELELKLLQALEIYPLVKLQGIH 60

Query: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120
           RHFVLFGLMEFLRRSFDR FSSDEVLQLLDRFYNLEMLKPDDEEMEILN EEDFCLPQTF
Sbjct: 61  RHFVLFGLMEFLRRSFDRQFSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTF 120

Query: 121 FVKEES 126
           FVKEES
Sbjct: 121 FVKEES 126

[Close]

BLAST of Csor.00g056520 vs. ExPASy TrEMBL
Match: A0A6J1FZZ7 (uncharacterized protein LOC111449449 OS=Cucurbita moschata OX=3662 GN=LOC111449449 PE=3 SV=1)

HSP 1 Score: 236 bits (601), Expect = 3.07e-78
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MESGGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIH 60
           MESGGKGR+EEQDG+SVHSPCKAPPSSASSLPKEQ QIELELKLLQALEIYPLVKLQGIH
Sbjct: 1   MESGGKGRDEEQDGMSVHSPCKAPPSSASSLPKEQAQIELELKLLQALEIYPLVKLQGIH 60

Query: 61  RHFVLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTF 120
           RHFVLFGLMEFLRRSFDR FSSDEVLQLLDRFYNLEMLKPDDEEMEILN EEDFCLPQTF
Sbjct: 61  RHFVLFGLMEFLRRSFDRQFSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTF 120

Query: 121 FVKEES 126
           FVKEES
Sbjct: 121 FVKEES 126

[Close]

BLAST of Csor.00g056520 vs. TAIR 10
Match: AT1G26470.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 194.5 bits (493), Expect = 5.1e-50
Identity = 97/122 (79.51%), Postives = 112/122 (91.80%), Query Frame = 0


Query: 4   GGKGREEEQDGISVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIHRHF 63
           GGK +EEEQDG+SVHSPCKA PSSASSL KEQ Q+ELEL+LL+ALEIYP VKL+GIHRHF
Sbjct: 11  GGKEKEEEQDGLSVHSPCKALPSSASSLSKEQSQVELELRLLEALEIYPPVKLRGIHRHF 70

Query: 64  VLFGLMEFLRRSFDRPFSSDEVLQLLDRFYNLEMLKPDDEEMEILNQEEDFCLPQTFFVK 123
           VL+GLME+L RSFDRPF++DEVLQLLDRFYN+EMLK DDE+++ILN EEDF LPQ+FF K
Sbjct: 71  VLYGLMEYLGRSFDRPFTADEVLQLLDRFYNIEMLKSDDEDIDILNHEEDFTLPQSFFDK 130

Query: 124 EE 126
           EE
Sbjct: 131 EE 132

The following BLAST results are available for this feature:

BLAST of Csor.00g056520 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g056520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956482.1	4.83e-82	100.00	uncharacterized protein LOC111458204 [Cucurbita moschata] >XP_022984147.1 unchar...	[more]
XP_008446430.1	4.64e-80	98.41	PREDICTED: uncharacterized protein LOC103489178 [Cucumis melo]	[more]
XP_038893367.1	1.33e-79	97.62	uncharacterized protein LOC120082183 [Benincasa hispida]	[more]
XP_004135149.1	2.69e-79	97.62	uncharacterized protein LOC101212766 isoform X2 [Cucumis sativus] >KGN51973.1 hy...	[more]
XP_022945110.1	6.34e-78	96.03	uncharacterized protein LOC111449449 [Cucurbita moschata] >XP_023541772.1 unchar...	[more]

BLAST of Csor.00g056520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J1E0	2.34e-82	100.00	uncharacterized protein LOC111482526 OS=Cucurbita maxima OX=3661 GN=LOC111482526...	[more]
A0A6J1GWG3	2.34e-82	100.00	uncharacterized protein LOC111458204 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]
A0A1S3BFV8	2.25e-80	98.41	uncharacterized protein LOC103489178 OS=Cucumis melo OX=3656 GN=LOC103489178 PE=...	[more]
A0A0A0KQU2	1.30e-79	97.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606640 PE=3 SV=1	[more]
A0A6J1FZZ7	3.07e-78	96.03	uncharacterized protein LOC111449449 OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]

BLAST of Csor.00g056520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26470.1	5.1e-50	79.51	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcripti...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR13581:SF6	BNAA07G09500D PROTEIN	coord: 8..125
IPR012423	Chromatin modification-related protein Eaf7/MRGBP	PANTHER	PTHR13581	MRG-BINDING PROTEIN	coord: 8..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g056520.m01	Csor.00g056520.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016573	histone acetylation
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0035267	NuA4 histone acetyltransferase complex
cellular_component	GO:0043189	H4/H2A histone acetyltransferase complex
cellular_component	GO:0005634	nucleus