Csor.00g046260 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g046260
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	non-specific lipid-transfer protein 2-like
Location	Csor_Chr18: 262821 .. 263093 (-)
RNA-Seq Expression	Csor.00g046260
Synteny	Csor.00g046260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCATCACAGATTGCAGTAAGCATGATGGTAATGTTTATGATGATGGAGGTGTGCGTGGCAGTGACATGCAGTCCAGTGCAGCTGAGTTCCTGCGTGAGTGCAATAACATCTTCAGTTCCACCTTCCAAGCTCTGCTGCTCTAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACTTTAAAGAAGTTTGTGGACTCTCCCAATGCCAGGAGAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG

mRNA sequence

ATGAAGGCATCACAGATTGCAGTAAGCATGATGGTAATGTTTATGATGATGGAGGTGTGCGTGGCAGTGACATGCAGTCCAGTGCAGCTGAGTTCCTGCGTGAGTGCAATAACATCTTCAGTTCCACCTTCCAAGCTCTGCTGCTCTAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACTTTAAAGAAGTTTGTGGACTCTCCCAATGCCAGGAGAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG

Coding sequence (CDS)

ATGAAGGCATCACAGATTGCAGTAAGCATGATGGTAATGTTTATGATGATGGAGGTGTGCGTGGCAGTGACATGCAGTCCAGTGCAGCTGAGTTCCTGCGTGAGTGCAATAACATCTTCAGTTCCACCTTCCAAGCTCTGCTGCTCTAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACTTTAAAGAAGTTTGTGGACTCTCCCAATGCCAGGAGAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG

Protein sequence

MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANTCGTPFPKC

Homology

[Close]

BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-18
Identity = 38/68 (55.88%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 23 VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANT 82
          VTCSPVQLS C+  I S  P    CC K++EQ+PCLC Y++NP+L+++V+SPNAR++A+ 
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 83 CGTPFPKC 91
          CG P P+C
Sbjct: 61 CGVPVPQC 68

[Close]

BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-17
Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 1  MKASQIAVSMMVMFMMME---VCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPC 60
          MK S +   ++V   +++   V  AVTC+P +LSSCV AIT    PS  CCSK+K Q+PC
Sbjct: 7  MKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPC 66

Query: 61 LCKYMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          LC Y++NP+LK++V+SP A++V + CG  +P C
Sbjct: 67 LCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]

BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.8e-17
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 0


Query: 24 TCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANTC 83
          TCS VQLS C++AIT + PPS  CC+K+KEQKPCLC Y+++P LK +V+SP AR+ A++C
Sbjct: 2  TCSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSC 61

Query: 84 GTPFPKC 91
          G    KC
Sbjct: 62 GVAL-KC 67

[Close]

BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot
Match: P82901 (Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-09
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 25 CSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANTCG 84
          C   QL+ C SAI S   PS  CC  ++ Q+PC C+Y ++PT  +++ SP+AR    +CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCG 61

Query: 85 TPFPKC 91
             P C
Sbjct: 62 LAVPHC 67

[Close]

BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 4.0e-09
Identity = 24/67 (35.82%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 24 TCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANTC 83
          +C+  QL+ C  AI     P+  CCS ++ Q+ C C++ ++P   ++V+SPNAR+  ++C
Sbjct: 29 SCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSC 88

Query: 84 GTPFPKC 91
          G   P C
Sbjct: 89 GIALPTC 95

[Close]

BLAST of Csor.00g046260 vs. NCBI nr
Match: KAG6572947.1 (hypothetical protein SDJN03_26834, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179 bits (453), Expect = 1.71e-56
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90
          YMQNPTLKKFVDSPNARRVANTCGTPFPKC
Sbjct: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90

[Close]

BLAST of Csor.00g046260 vs. NCBI nr
Match: XP_022923700.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata] >XP_023519179.1 non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo] >KAG6584342.1 hypothetical protein SDJN03_20274, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 163 bits (413), Expect = 2.18e-50
Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIAVS++VMFMM EV VAVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90
          YMQNPTL+KFV SPNAR+VANTCGTPFPKC
Sbjct: 61 YMQNPTLRKFVASPNARKVANTCGTPFPKC 90

[Close]

BLAST of Csor.00g046260 vs. NCBI nr
Match: XP_004137484.1 (non-specific lipid-transfer protein 2 [Cucumis sativus])

HSP 1 Score: 161 bits (407), Expect = 1.79e-49
Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIA+S++VMFM +E+ +AVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90
          YMQNPTLKKFV SPNAR+VANTCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 90

[Close]

BLAST of Csor.00g046260 vs. NCBI nr
Match: XP_023000838.1 (probable non-specific lipid-transfer protein AKCS9 [Cucurbita maxima])

HSP 1 Score: 162 bits (410), Expect = 2.96e-49
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1   MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
           MKASQIAV+++VMFMM EV VAVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 51  MKASQIAVTILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 110

Query: 61  YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90
           YMQNPTL+KFV SPNAR+VANTCGTPFPKC
Sbjct: 111 YMQNPTLRKFVASPNARKVANTCGTPFPKC 140

[Close]

BLAST of Csor.00g046260 vs. NCBI nr
Match: KAG7019930.1 (hypothetical protein SDJN02_18897, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160 bits (404), Expect = 5.14e-49
Identity = 81/90 (90.00%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 1  MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIAVS++VMFMM EV VAVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90
          YMQNPTL+KFV SPNAR+VANTC TPFPKC
Sbjct: 61 YMQNPTLRKFVASPNARKVANTCVTPFPKC 90

[Close]

BLAST of Csor.00g046260 vs. ExPASy TrEMBL
Match: A0A6J1ECM2 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111431330 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 1.05e-50
Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIAVS++VMFMM EV VAVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIAVSILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90
          YMQNPTL+KFV SPNAR+VANTCGTPFPKC
Sbjct: 61 YMQNPTLRKFVASPNARKVANTCGTPFPKC 90

[Close]

BLAST of Csor.00g046260 vs. ExPASy TrEMBL
Match: A0A0A0LVT5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042560 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 8.67e-50
Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIA+S++VMFM +E+ +AVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90
          YMQNPTLKKFV SPNAR+VANTCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 90

[Close]

BLAST of Csor.00g046260 vs. ExPASy TrEMBL
Match: A0A6J1KNT4 (probable non-specific lipid-transfer protein AKCS9 OS=Cucurbita maxima OX=3661 GN=LOC111495166 PE=4 SV=1)

HSP 1 Score: 162 bits (410), Expect = 1.44e-49
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1   MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
           MKASQIAV+++VMFMM EV VAVTCSP+QLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 51  MKASQIAVTILVMFMMAEVSVAVTCSPLQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 110

Query: 61  YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90
           YMQNPTL+KFV SPNAR+VANTCGTPFPKC
Sbjct: 111 YMQNPTLRKFVASPNARKVANTCGTPFPKC 140

[Close]

BLAST of Csor.00g046260 vs. ExPASy TrEMBL
Match: A0A5D3BJV8 (Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002150 PE=4 SV=1)

HSP 1 Score: 157 bits (397), Expect = 2.91e-48
Identity = 77/90 (85.56%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIA+S++VMFMM+E+ +AVTCSPVQLSSCVSAITSSVPPS LCCSKIKEQ+PCLCK
Sbjct: 1  MKASQIALSIIVMFMMVEISMAVTCSPVQLSSCVSAITSSVPPSSLCCSKIKEQRPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 90
          YMQNPTLKKFV SPNA++VA+TCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNAKKVASTCGTPFPKC 90

[Close]

BLAST of Csor.00g046260 vs. ExPASy TrEMBL
Match: V7C3M6 (AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G154200g PE=4 SV=1)

HSP 1 Score: 138 bits (348), Expect = 9.20e-41
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MKASQIAVSMMVMFMMMEVCV--AVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKA+ IA+  +V+ ++ EV V  AVTCSPVQLSSCVSAITSS PPS LCCSKIKEQKPCL
Sbjct: 1  MKAAHIALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 60

Query: 61 CKYMQNPTLKKFVDSPNARRVANTCGTPFPKC 90
          CKY++NP LKKFVDSPNAR+VA+TCGTPFP+C
Sbjct: 61 CKYLKNPNLKKFVDSPNARKVASTCGTPFPRC 92

[Close]

BLAST of Csor.00g046260 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 8.5e-23
Identity = 47/87 (54.02%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 4  SQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQ 63
          S  A++ +++ ++     AVTCSP+QLS C +AITSS PPS LCC+K+KEQ+PCLC YM+
Sbjct: 10 SLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMR 69

Query: 64 NPTLKKFVDSPNARRVANTCGTPFPKC 91
          NP+L++FV +PNAR+V+ +C  P P+C
Sbjct: 70 NPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]

BLAST of Csor.00g046260 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-22
Identity = 47/90 (52.22%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 1  MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          M  S +A++  ++ + + V   VTCSP+QL+SC +A+TSS PPS+ CC+K++EQ+PCLC 
Sbjct: 5  MWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCG 64

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          YM+NPTL+++V SPNAR+V+N+C  P P C
Sbjct: 65 YMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]

BLAST of Csor.00g046260 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 2.6e-16
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 23  VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANT 82
           VTC  VQLSSC + + + VPPS  CC K+KEQ+PC C Y+++P   ++V S NA++   T
Sbjct: 36  VTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAKKTLAT 95

Query: 83  CGTPFPKC 91
           CG P+P C
Sbjct: 96  CGVPYPTC 103

[Close]

BLAST of Csor.00g046260 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15
Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 10 MMVMFMMMEVCVAVT--CSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTL 69
          ++++ +  E  VA    C+P QLS C+  I     PS LCCSK+KEQ+ C+C+Y++NP  
Sbjct: 16 LLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPNF 75

Query: 70 KKFVDSPNARRVANTCGTPFPKC 91
          K F++SPNA+ +A  C  P+PKC
Sbjct: 76 KSFLNSPNAKIIATDCHCPYPKC 98

[Close]

BLAST of Csor.00g046260 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15
Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 21  VAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVA 80
           V VTC   QLSSCV+A+++  PPS  CC K+KE + CLC Y+QNP    +V SPNAR+  
Sbjct: 34  VNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTL 93

Query: 81  NTCGTPFPKC 91
             C   +P C
Sbjct: 94  AACDVAYPTC 103

The following BLAST results are available for this feature:

BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82353	1.2e-18	55.88	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
Q43681	1.4e-17	47.31	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]
P86809	6.8e-17	58.21	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
P82901	1.0e-09	40.91	Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1	[more]
A2XBN5	4.0e-09	35.82	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of Csor.00g046260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572947.1	1.71e-56	100.00	hypothetical protein SDJN03_26834, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022923700.1	2.18e-50	91.11	non-specific lipid-transfer protein 2-like [Cucurbita moschata] >XP_023519179.1 ...	[more]
XP_004137484.1	1.79e-49	88.89	non-specific lipid-transfer protein 2 [Cucumis sativus]	[more]
XP_023000838.1	2.96e-49	90.00	probable non-specific lipid-transfer protein AKCS9 [Cucurbita maxima]	[more]
KAG7019930.1	5.14e-49	90.00	hypothetical protein SDJN02_18897, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Csor.00g046260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ECM2	1.05e-50	91.11	non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0LVT5	8.67e-50	88.89	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042560 PE=4 SV...	[more]
A0A6J1KNT4	1.44e-49	90.00	probable non-specific lipid-transfer protein AKCS9 OS=Cucurbita maxima OX=3661 G...	[more]
A0A5D3BJV8	2.91e-48	85.56	Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
V7C3M6	9.20e-41	76.09	AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G154200g...	[more]

BLAST of Csor.00g046260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18280.1	8.5e-23	54.02	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G48750.1	1.1e-22	52.22	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38170.1	2.6e-16	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73780.1	1.0e-15	44.58	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38160.1	1.3e-15	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 25..90 e-value: 0.0096 score: 25.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 19..86 e-value: 1.5E-6 score: 28.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 23..90 e-value: 1.1E-23 score: 85.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 24..90
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 2..90
IPR033872	Non-specific lipid-transfer protein type 2	CDD	cd01959	nsLTP2	coord: 25..90 e-value: 2.12194E-24 score: 85.0578
None	No IPR available	PANTHER	PTHR33214:SF30	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 2..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g046260.m01	Csor.00g046260.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport